maintainer: Anita Risch

en: grazing ecosystem-functions vertebrates ecosystem-multifunctionality invertebrates grassland swiss-national-park exclusion subalpine ecosystem-coupling

en: Datafile

en:
ID: Plot ID composited of Fence & Treatment number (90 plots total)

Grassland: Name of the six subalpine grasslands where the exclosure setups were erected. In large grasslands (GRIM, MING, STAB), we established four hierarchical exclosure setups (two in short- and two in tall-grass vegetation), whereas in the small grasslands (BOTS, DADA, MARG) only one setup was erected per vegetation type. BOTS = Val dal Botsch, GRIM = Grimmels, MING = Val Mingér, STAB = Alp Stabelchod, DADA = Stabelchod da daint, MARG = Margunet

Fence: Number of exclosure setup (1 - 18). Note that uneven numbers (1,3,5,7,9,11,13,15,17) represent setups established on short-grass vegetation, even numbers (2,4,6,8,10,12,14,16,18) setups established in tall-grass vegetation
Vegetation	Vegetation type, 1 = short-grass vegetation, 2 = tall-grass vegetation; (9 replicate fences on each vegetation type)
Treatment	Progressive animal exclusion, numbers indicate which animals had access to the plot: 1 = Large/medium/small mammals, and invertebrates have access ("L/M/S/I"), 2 = Medium/small mammals, and invertebrates have access (“M/S/I”), 3 = Small mammals and invertebrates have access (“S/I”), 4 = Invertebrates have access (“I”), 5 = No animals have access (“None”)

Bulkden:	Fine fraction soil bulk density (g cm-3)

Soil.moist	: Soil moisture (%)

Soil.org.C: Rhizosphere soil C content (%)

pH: Soil pH

Nema.PC1: First principal component (PC1) of principal component analysis (PCA) of the soil nematode community composition

Nema.PC2: Second principal component (PC2) of principal component analysis (PCA) of the soil nematode community composition

Micro.PC1: 	First principal component (PC1) of principal component analysis (PCA) of the soil microbial community composition

Micro.PC2: Second principal component (PC2) of principal component analysis (PCA) of the soil microbial community composition

Abv.Inv.PC1: First principal component (PC1) of principal component analysis (PCA) of the aboveground-dwelling invertebrate community composition

Abv.Inv.PC2: Second principal component (PC2) of principal component analysis (PCA) of the aboveground-dwelling invertebrate community composition

Arthr.PC1: First principal component (PC1) of principal component analysis (PCA) of the soil arthropod community composition

Arthr.PC2: Second principal component (PC2) of principal component analysis (PCA) of the soil arthropod community composition

Plant.PC1: First principal component (PC1) of principal component analysis (PCA) of the plant community composition

Plant.PC2: Second principal component (PC2) of principal component analysis (PCA) of the plant community composition

Root.biomass: Root biomass (g m-2)

Micro.biomass	: Microbial biomass carbon (mg kg-1)

Plant.richness: Plant species richness

Plant.N: Plant tissue nitrogen content (%)

Soil.N.min: Soil net nitrogen mineralisation (kg ha-1 season)

Soil.resp: Soil carbon dioxide emissions (soil respiration; g m-2 h-1)

en:
This dataset contains all data on which the following publication below is based.

Paper Citation:
 > Risch AC, Ochoa-Hueso R, van der Putten WH, Bump JK, Busse MD, Frey B, Gwiazdowicz DJ, Page-Dumroese DS, Vandegehuchte ML, Zimmermann S, Schütz M. Size-dependent loss of aboveground animals differentially affects grassland ecosystem coupling and functions. 2018. Nature Communications 9: 3684. [doi: 10.1038/s41467-018-06105-4](https://doi.org/10.1038/s41467-018-06105-4).

Please cite this paper together with the citation for the datafile.

#Methods
Study sites
The experimental exclosure setups were installed within the SNP (IUCN category Ia preserve; Dudley 2008), in south-eastern Switzerland. The park covers 172 km2 of forests and subalpine and alpine grasslands along with scattered rock outcrops and scree slopes. The entire area has been protected from human impact (no hunting, fishing, camping or off-trail hiking) since 1914. Large, fairly homogenous patches of short- and tall-grass vegetation, which originate from different historical management and grazing regimes, cover the park’s subalpine grasslands entirely. Short-grass vegetation developed in areas where cattle used to rest (nutrient input) prior to the park’s foundation (14th century to 1914) (Schütz and others 2003, 2006) and is dominated by lawn grass species such as Festuca rubra L., Briza media L. and Agrostis capillaris L. (Schütz and others 2003, 2006). Today, this vegetation type is intensively grazed by diverse vertebrate and invertebrate communities that inhabit the park and consume up to 60% of the available biomass (Risch and others 2013). Tall-grass vegetation developed where cattle formerly grazed, but did not rest, and is dominated by rather nutrient-poor tussocks of Carex sempervirens Vill. and Nardus stricta L. (Schütz and others 2003, 2006). This vegetation type receives considerably less grazing, with only roughly 20% of the biomass consumed (Risch and others 2013). Consequently, the two vegetation types together represent a long-term trajectory of changes in grazing regimes. Underlying bedrock of all grasslands is dolomite, which renders these grasslands rather poor in nutrients regardless of former and current land-use regimes.
Experimental design
To progressively exclude aboveground vertebrate and invertebrate animals, we established 18 size-selective exclosure setups (nine in short-grass, nine in tall-grass vegetation) distributed over six subalpine grasslands across the SNP (Risch and others 2013, 2015). Elevation differences of exclosure locations did not exceed 350 m (between 1975 and 2300 m a.s.l.). The exclosures were established immediately after snowmelt in spring 2009 and were left in place for five consecutive growing seasons (until end of 2013). They were, however, temporarily dismantled every fall (late October after first snowfall) to protect them from avalanches. They were re-established in the same location every spring immediately after snowmelt. Each size-selective exclosure setup consisted of five plots (2 x 3 m) that progressively excluded aboveground vertebrates and invertebrates from large to small. The plots are labelled according to the guilds that had access to them “L/M/S/I”, “M/S/I”, “S/I”, “I”, “None”; L = large mammals, M = medium mammals, S = small mammals, I = invertebrates, None = no animals had access. As we only had permission to have the experimental setup in place for five consecutive growing seasons, the experiment had to be completely dismantled in the late fall of 2013 and all material removed from the SNP.
Our exclosure design was aimed at excluding mammalian herbivores, but naturally also excluded the few medium and small mammalian predators, as well as the entire aboveground invertebrate food web. A total of 26 large to small mammal species can be found in the SNP, but large apex predators are missing (wolf, bear, lynx) . Reptiles, amphibians and birds are scarce to absent in the subalpine grasslands under study. Only two reptile species occur in the park and they are confined to rocky areas that warm up enough for them to survive. One frog species spawns in an isolated pond far from our grasslands. Only three bird species occasionally feed on the subalpine grasslands. Using game cameras (Moultrie 6MP Game Spy I-60 Infrared Digital Game Camera, Moultrie Feeders, Alabaster, AL, USA), we did observe that the medium- and small-sized mammals (marmot/hares and mice) were not afraid to enter the fences and feed on their designated plots. We never spotted reptiles, amphibians or birds on camera. We distinguished between 59 higher aboveground-dwelling invertebrate taxa that our size-selective exclosures excluded (see also methods for aboveground-dwelling invertebrates below).
The “L/M/S/I” plot (not fenced) was located at least 5 m from the 2.1 m tall and 7 x 9 m large main electrical fence that enclosed the other four plots. The bottom wire of this fence was mounted at 0.5 m height and was not electrified to enable safe access for medium and small mammals, while fencing out the large ones. Within each main fence, we randomly established four 2 x 3 m plots separated by 1-m wide walkways from one another and from the main fence line: 1) the “M/S/I” plots were unfenced, allowing access to all but the large mammals; 2) the “S/I” plots (10 x 10 cm electrical mesh fence) excluded all medium-sized mammals. Note that the bottom 10 cm of this fence remained non-electrified to enable safe access for small mammals; 3) the “I” plots (2 x 2 cm metal mesh fence) excluded all mammals. We double-folded the mesh at the bottom 50 cm to reduce the mesh size to smaller than 1 x 1 cm openings; and 4) the “None” plots were surrounded by a 1 m tall mosquito net (1.5 x 2 mm) to exclude all animals. The top of the plot was covered with a mosquito-meshed wooden frame mounted to the corner posts (roof). We treated these plots a few times with biocompatible insecticide (Clean kill original, Eco Belle GmbH, Waldshut-Tiengen, Germany) to remove insects that might have entered during data collection or that hatched from the soil, but amounts were negligible and did not impact soil moisture conditions within these plots.
To assess whether the design of the “None” exclosure (mesh and roof) affected the response variables within the plots and, therefore, influenced the results, we established an additional six “micro-climate control” exclosures (one in each of the six grasslands) (Risch and others 2013, 2015). These exclosures were built as the “None” exclosures but were open at the bottom (20 cm) of the 3-m side of the fence facing away from the prevailing wind direction to allow invertebrates to enter. A 20-cm high and 3-m long strip of metal mesh was used to block access to small mammals. Thus, this construction allowed a comparable micro-climate to the “None” plots, but also a comparable feeding pressure by invertebrates to the “I” plots. We compared various properties within these exclosures against one another to assess if our construction altered the conditions in the “None” plots. We showed that differences in plant (e.g., vegetation height, aboveground biomass) and soil properties (e.g., soil temperature, moisture) found between the “I” and the “None” treatments were not due to the construction of the “None” exclosure, but a function of animal exclusions, although the amount of UV light reaching the plant canopy was significantly reduced (Risch and others 2013).
Aboveground invertebrate sampling
Aboveground invertebrates were sampled with two different methods to capture both ground- and plant-dwelling organisms: 1) we randomly placed two pitfall traps (67 mm in diameter, covered with a roof) filled with 20% propylene glycol in one 1 x 1 m subplot of the 2 x 3 m treatment plots in spring 2013 (May) and emptied them every two weeks until late September 2013 (Vandegehuchte and others 2017b, 2018). A pitfall trap consisted of a plastic cylinder (13 cm depth, 6.75 cm diameter). Within each cylinder we placed a 100 ml plastic vial with outer diameter 6.70 cm and on top of the cylinder we placed a plastic funnel to guide the invertebrates into the vials. Each trap was cover with a cone-shaped and transparent plastic roof to protect the trap from rain (Vandegehuchte and others 2017b, 2018). Note that in the “None” plots only one trap was placed as control to check for effectiveness of the exclosure. 2) We vacuumed all invertebrates from a 60 x 60 cm area on another 1 x 1 m subplot with a suction sampler (Vortis, Burkhard manufacturing CO, Ltd., Rickmansworth, Hertfordshire, UK) every month from June to September 2013 (Vandegehuchte and others 2017b, 2018). For this purpose, we quickly placed a square plastic frame (60 x 60 x 40 cm) with a closable mosquito mesh sleeve attached to the top edge into the plot from the outside. The suction sample was then inserted into through the sleeve and operated for 45 s to collect the invertebrates (Vandegehuchte and others 2017b, 2018).
We sorted the ≈100 000 individuals collected with both methods by hand and identified each individual morphologically to the lowest taxonomic level feasible (59 taxa, including orders, suborders, subfamilies, families; phylum for Mollusca). These taxa belonged to the following feeding types: 19 herbivores, 16 detritivores, 9 predators, 8 mixed feeders, 5 omnivores and 2 non-classified feeders (or not feeding as adults) (Vandegehuchte and others 2017b). We summed the numbers from the two pitfall traps and the suction sampling over the course of the 2013 season to represent the aboveground invertebrate abundance and community composition of a plot. Note: we did not specifically attempt to catch flying invertebrates with e.g., sticky traps, thus a few flying insects may have been missed with our vacuum sampling approach.
Sampling of plant properties
The vascular plant species composition was assessed at peak biomass every summer (July) by estimating the frequency of occurrence of each species with the pin count method in each plot (Frank and McNaughton 1990). A total of 172 taxa occurred within our 90 plots and we calculated plant species richness for each plot separately. We used the 2013 data in this study. Plant quality was assessed every year in July and September; here we use plant quality at the end of the experiment (September 2013). Two 10 x 100 cm wide strips of vegetation per plot were clipped, combined, dried at 65°C, and ground (Pulverisette 16, Fritsch, Idar-Oberstein, Germany) to pass through a 0.5 mm sieve. Twenty randomly selected samples across all treatments were analysed for N (Leco TruSpec Analyser, Leco, St. Joseph, Michigan, USA) (Vandegehuchte and others 2015). Nitrogen concentrations of the other samples were then estimated from models established for the experiment and the entire SNP relating Fourier transform-near infrared reflectance (FT-NIR) spectra to the measured values of N using a multi-purpose FT-NIR spectrometer (Bruker Optics, Fällanden, Switzerland) (Vandegehuchte and others 2015). Root biomass was sampled every fall by collecting five 2.2 cm diameter x 10 cm deep soil samples (Giddings Machine Company, Windsor, CO, USA) per plot (450 samples year-1). The samples were dried at 30 °C and roots were sorted from the sample by hand. We sorted each sample for 1 h which allowed to retrieve over 90% of all roots present in the samples (Risch and others 2013). The roots were then dried at 65 °C for 48 and weighed to the nearest mg. We averaged the values per plot and used the 2013 data only in this study.
Sampling of edaphic communities
In 2009, 2010, and 2011 we collected three composited soil samples (5 cm diameter x 10 cm depth; AMS Samplers, American Falls, ID, USA) and assessed bacterial community structure using T-RFLP profiling (Liu and others 1997; Blackwood and others 2003; Hodel and others 2014). We detected a total of 89 operational taxonomic units (OTUs). These values are in accordance with other studies reporting OTU richness (Wirthner and others 2011; Zumsteg and others 2012; Meola and others 2014) using T-RFLP profiling, a method that detects the most abundant, and thus likely, the most relevant, taxa. We averaged the data over the three years of collections for our calculations. Microbial biomass carbon (MBC) was determined with the substrate-induced method (Anderson and Domsch 1978) every fall (September) between 2009 and 2013 by collecting three mineral soil samples (5 cm diameter × 10 cm mineral soil core, AMS Samplers, American Falls, ID, USA). The three samples were combined (90 samples for each sampling year), immediately put on ice, taken to the laboratory, passed through a 2-mm sieve and stored at 4°C. Again, we only used the 2013 data in this study.
Soil samples (5 cm diameter x 10 cm depth) to extract soil arthropods were collected in June, July, and August 2011 with a soil corer lined with a plastic sleeve to ensure an undisturbed sample (total of 270 samples). The plastic line core was immediately sealed on both ends using cling film and put into a cooler. All plots were sampled within three days and the extraction of arthropods started the evening of the sampling day using a high-gradient Tullgren funnel apparatus (Crossley and Blair 1991; Vandegehuchte and others 2015). Samples were kept in the extractor for four days and the soil arthropods were collected in 95% ethanol. All individuals were counted and each individual was identified morphologically to the lowest level feasible [76 taxa, including orders, suborders, subfamilies, families (Protura, Thysanoptera, Aphidina, Psylina, Coleoptera, Brachycera, Nematocera, Auchenorryncha, Heteroptera, Formicidae); sub-phylum for Myriapoda, for Acari and Collembola also including morpho-species). Note that we also included larval stages (nine of the 76 taxa) (Vandegehuchte and others 2015). All data were summed over the season. A detailed species list for mites and collembolans is published (Vandegehuchte and others 2017a) [https://doi.org/10.1371/journal.pone.0118679.s001]. Earthworms are rare in the SNP and therefore were not included. We collected eight random 2.2 cm diameter x 10 cm deep soil cores from each plot in September 2013 to determine the soil nematode community composition. The samples were mixed and the nematodes were extracted from 100 ml of fresh soil using Oostenbrink elutriators (Oostenbrink 1960). All nematodes in a 1 ml of the 10 ml extract were counted, a minimum of 150 individuals sample-1 were identified to genus or family level using (Bongers 1988), the numbers of all nematodes were extrapolated to the entire sample and expressed for a 100 g dry sample. In total we identified 63 genus or family levels (Vandegehuchte and others 2015). The list of all the nematodes found is published (Vandegehuchte and others 2015) [http://www.oikosjournal.org/appendix/oik-03341] or DOI: [doi: 10.1111/oik.03341].
We are aware that sampling soil microbes from 2009 to 2011 and soil arthropods in 2011 was not ideal, but we are positive that this does not bias the results. Most of the parameters measured in our experiment either already showed a treatment response after the first growing season (e.g., plant biomass) or did not respond over the entire time experiment (e.g., microbial biomass C). The microbial community composition (2009 – 2011) was highly influenced by inter-annual differences in temperature and precipitation, but did not differ between treatments or vegetation types (Hodel and others 2014). We therefore felt comfortable using the 2009 through 2011 data for describing the soil microbial community in our experimental treatments. Similarly, we are positive that our soil arthropod data are representative. We did assess soil arthropods in August 2012 and found no differences to the August 2011 data. However, we did not feel comfortable combining the 2011 June, July, August data with only August data for 2012 for our analyses.
Sampling of soil properties
We collected three soil samples (5 cm diameter x 10 cm depth) in each plot in September 2013 after removing the vegetation. First, we collected the top layer of mineral soil rich in organic matter, the surface organic layer or rhizosphere, typically 1 to 3 cm in depth with a soil corer (AMS Samples, American Falls, Idaho, USA). Second, we collected a 10 cm mineral soil core beneath this surface layer. The cores for each layer were composited, dried at 65 °C for 48 h and fine-ground to pass a 0.5 mm screen. We then analysed all samples for total C using a Leco TruSpec Analyser (Leco, St. Joseph, Michigan, USA). Mineral soil pH was measured potentiometrically in 1:2 soil:CaCl2 solution with an equilibration time of 30 min.
Soil net N mineralisation was assessed during the 2013 growing season (Risch and others 2015). For this purpose, we randomly collected a 5 cm diameter x10 cm deep soil sample with a soil corer (AMS Samples, American Falls, Idaho, USA) after clipping the vegetation in June 2013. After weighing and sieving (4 mm mesh) the soil, we extracted a 20 g subsample in 1 mol l-1 KCl for 1.5 h on an end-over-end shaker and thereafter filtered it through ashless folded filter paper (DF 5895 150, ALBET LabScience, Hahnenmühle FineArt GmbH, Dassel, Germany). From these filtrates NO3- concentrations were measured colorimetrically (Norman and Stucki 1981) and NH4+with flow injection analysis (FIAS 300, Perkin Elmer, Waltham Massachusetts, USA) (Risch and others 2015). We dried the rest of the sample 105 °C to constant mass to determine fine,fraction bulk density. A second soil sample was collected within each plot in June 2013 with a corer lined with a 5 x 13 cm aluminium cylinder. The corer was driven 11.5 cm deep into the soil so that the top 1.5 cm of the cylinder remained empty. Into this space we placed a polyester bag (250 µm) filled an ion-exchanger resin to capture the incoming N. The bag was filled with a 1:1 mixture of acidic and alkaline exchanger resin (ion-exchanger I KA/ion exchanger IIIAA, Merck AG, Darmstadt, Germany). We then removed 1.5 cm soil at the bottom of the cylinder and placed a second resin exchanger bag into this space to capture the N leached from the soil column. To assure that the exchange resin was saturated with H+ and Cl- prior to filling the bags, the mixture was stirred with 1.2 ml l-1 HCl for 1 h and then rinsed with demineralized water until the electrical conductivity of the water reached 5 µm cm-1. The cylinder with the resin bags in place was reinserted into the soil with the top flush to the soil surface and incubated for three months. We recollected the cylinders in September 2013. Each resin bag and 20 g of sieved soil (4 mm mesh) from each cylinder were then separately extracted with KCl and NO3- and NH4+ concentrations were measured. Nitrate and NH4+ concentrations of all samples were then converted to a content basis by multiplying their values with fine fraction bulk density. Net N mineralisation was thereafter calculated as the difference between the N content of the samples collected at the end of the three-month incubation (including the N extracted from the bottom resin bag) and the N content at the beginning of the incubation (Risch and others 2015).
Soil CO2 emissions were measured every two weeks between 0900 and 1700 hrs from early May through late September 2013 with a PP-Systems SRC-1 soil respiration chamber (15 cm high, 10 cm diameter; closed circuit) attached to a PP-Systems EGM-4 infrared gas analyser (PP-Systems, Amesbury, MA, USA) on two locations per plot (Risch and others 2013). The chamber was placed on randomly placed, permanently installed PVC collars (10 cm diameter) driven 5 cm into the soil at the beginning of the study (Risch and others 2013). Freshly germinated plants growing within the collars were removed prior to each measurement to avoid measuring plant respiration or photosynthesis. The two measurements collected per plot and sampling date were averaged.
Soil moisture (with time domain reflectometry; Field-Scout TDR-100, Spectrum Technologies, Plainfield, Illionois, USA) and temperature (with a waterproof digital pocket thermometer; Barnstead International, Dubuque, Iowa, USA) were measured at five random locations per plot every two weeks during the growing seasons during the experiment for the 0 to 10 cm depth (Risch and others 2013, 2015). As soil moisture and soil temperature were highly negatively correlated (Risch and others 2013), we only used soil moisture for this study. We used plot-level averages of all values available to capture soil moisture variability during the five years of the experiment. The results remained unchanged when we only used soil moisture from the 2013 growing season.
Numeral calculations and statistical analyses
Ecosystem coupling. We conducted principal component analyses (PCAs; unscaled) at the complete dataset level using the abundances of each taxonomical entity to describe each of the five different communities used in this study: aboveground-dwelling invertebrates, vascular plants, soil microorganisms, soil arthropods and soil nematodes. We retained the first two components (PCA axis 1 and PCA axis 2) of each analysis as we found them to adequately represent the temporal and spatial variability of our 90 treatment plots in previous studies55,67. Together they explained a total of 71.70% of the variation for aboveground invertebrates, 44.36% for plants, 44.85% for soil microorganisms, 61.85% for soil arthropods and 77.19% for soil nematodes. In addition, we used soil pH and soil organic C content as a proxy for soil chemical properties, soil bulk density as a proxy for soil physical properties and soil moisture (negatively correlated with soil temperature) as a proxy for soil micro-climatic conditions for an overall total of fourteen constituents.
We calculated ecosystem coupling9 for each exclosure treatment within each vegetation type (i.e., 2  5 treatment combinations in total) as an integrated measure of pairwise ecological interactions between ecosystem constituents representing ecological communities and the soil abiotic environment. These ecological interactions are defined by non-parametric Spearman rank correlation analyses between two constituents, excluding interactions involving two abiotic constituents (e.g., soil pH vs. soil moisture) and interactions between the first (PC1) and second (PC2) component of each community type, as these are orthogonal by definition. Interactions between abiotic constituents were excluded from the analyses because the focus of our study was on communities and how they interact with one another and their surrounding environment; therefore, including abiotic-abiotic interactions was not of interest here. Given that the effectiveness of our experimental design resulted in that no community composition data of aboveground-dwelling invertebrates was available for the “None” plots (all animals excluded), only thirteen instead of fourteen constituents were included in the ecosystem coupling calculations for this treatment. The complete absence of aboveground invertebrates represents the most extreme case of disturbance between aboveground animal communities and the rest of the ecosystem constituents. This may have resulted in a slight overestimation of ecosystem coupling for these plots.
	Average ecosystem coupling was calculated as follows:
Ecosystem coupling=
where Xi is the absolute Coupling was calculated value of the Spearman’s rho coefficient of the ith correlation for each treatment within each vegetation type (i.e., based on nine replicates each), considering and n is the number of pairwise comparisons considered (n = a total of 80; interactions (56 in the case of the “None” treatment). We considered a total of 40 biotic-biotic interactions (i.e., concerning two community-level principal components such as plants and microbes; 24 in the case of the “None” treatment) and 40 abiotic-biotic (i.e., concerning one community-level principal component and one abiotic factor, e.g., plant community and soil properties; 32 in the case of the “None” treatment).	Coupling was calculated for each treatment within each vegetation type (i.e., based on nine replicates each), considering a total of 80 interactions (56 in the case of the “None” treatment). We considered a total of 40 biotic-biotic interactions (i.e., concerning two community-level principal components such as plants and microbes; 24 in the case of the “None” treatment) and 40 abiotic-biotic (i.e., concerning one community-level principal component and one abiotic factor, e.g., plant community and soil properties; 32 in the case of the “None” treatment).
To establish whether constituents were significantly and positively coupled within treatments (i.e., the average of their correlation coefficients were greater than in a null model where correlation only happens by chance), we calculated one-tailed p-values based on permutation tests with 999 permutations.

We considered six ecosystem functions and process rates commonly used to assess ecosystem functioning (Meyer and others 2015; Manning and others 2018). Plant N content represents a measure of forage quality, while plant richness has been shown to stabilise biomass production, thus allowing the system to respond to changes in herbivory. Soil net N mineralisation, soil respiration, root biomass, and microbial biomass represent fluxes or stocks of energy. For all functions and processes higher values represent higher functioning (Manning and others 2018). All these variables were measured in the last year of the experiment (2013). We then quantified ecosystem multifunctionality using the multiple threshold approach (Byrnes and others 2014; Manning and others 2018), which considers the number of functions that are above a certain threshold, over a series of threshold values (typically 10-99%) that are defined based on the maximum value of each function. We weighted all our functions equally for these calculations (Manning and others 2018). The number of functions in a plot with values higher than a given threshold value for the respective function is summed up. The sum represents ecosystem multifunctionality for that plot. Given that choosing any particular threshold as a measure of ecosystem multifunctionality is arbitrary, we calculated the average of thresholds from 10-90% (in 10% intervals) as a more integrated representation of ecosystem multifunctionality.
We used Pearson correlations to explore the relationships between ecosystem coupling (all interactions, biotic-biotic interactions, abiotic-biotic interactions involving above- and belowground constituents, and all interactions, biotic-biotic interactions, abiotic-biotic interactions involving belowground constituents only) and ecosystem multifunctionality by calculating the slopes of all relationships between ecosystem coupling and multifunctionality for all thresholds between 10 and 99%. We also related ecosystem coupling with the average of multifunctionality at thresholds between 30-80% as explained before and considered this correlation as a robust indication of the type of association between these two variables. In addition, we explored the relationships between ecosystem coupling (all interactions, biotic-biotic interactions, abiotic-biotic interactions involving above- and belowground constituents, and all interactions, biotic-biotic interactions, abiotic-biotic interactions involving belowground constituents only) and individual ecosystem functions. The effects of exclosures and vegetation type on individual functions and multifunctionality were evaluated using linear mixed effects models ('lme' function of the nlme package), with exclosure and vegetation type as fixed effects and fence as a random factor. All statistical analyses and numerical calculations were done in R version 3.4.0 (R Core Team 2016).

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- R Core Team. 2016. R: A language and environment for statistical computing. Vienna, Austria: R Foundation for Statistical Computing
- Risch AC, Haynes AG, Busse MD, Filli F, Schütz M. 2013. The response of soil CO2 fluxes to progressively excluding vertebrate and invertebrate herbivores depends on ecosystem type. Ecosystems 16:1192–202.
- Risch AC, Schütz M, Vandegehuchte ML, Van Der Putten WH, Duyts H, Raschein U, Gwiazdowicz DJ, Busse MD, Page-Dumroese DS, Zimmermann S. 2015. Aboveground vertebrate and invertebrate herbivore impact on net N mineralization in subalpine grasslands. Ecology 96:3312–22.
- Schütz M, Risch AC, Achermann G, Thiel-Egenter C, Page-Dumroese DS, Jurgensen MF, Edwards PJ. 2006. Phosphorus translocation by red deer on a subalpine grassland in the Central European Alps. Ecosystems 9:624–633.
- Schütz M, Risch AC, Leuzinger E, Krüsi BO, Achermann G. 2003. Impact of herbivory by red deer (Cervus elaphus L.) on patterns and processes in subalpine grasslands in the Swiss National Park. For Ecol Manage 181:177–88.
- Vandegehuchte ML, van der Putten WH, Duyts H, Schütz M, Risch AC. 2017a. Aboveground mammal and invertebrate exclusions cause consistent changes in soil food webs of two subalpine grassland types, but mechanisms are system-speciﬁc. Oikos 126:212–23.
- Vandegehuchte ML, Raschein U, Schütz M, Gwiazdowicz DJ, Risch AC. 2015. Indirect short- and long-term effects of aboveground invertebrate and vertebrate herbivores on soil microarthropod communities. PLoS One 10:e0118679.
- Vandegehuchte ML, Schütz M, de Schaetzen F, Risch AC. 2017b. Mammal-induced trophic cascades in invertebrate food webs are modulated by grazing intensity in subalpine grassland. J Anim Ecol 86:1434–46.
- Vandegehuchte ML, Trivellone V, Schütz M, Firn J, de Schaetzen F, Risch AC. 2018. Mammalian herbivores affect leafhoppers associated with specific plant functional types at different timescales. Funct Ecol 32:545–55.
- Wirthner S, Frey B, Busse MD, Schütz M, Risch AC. 2011. Effects of wild boar (Sus scrofa L.) rooting on the bacterial community structure in mixed-hardwood forest soils in Switzerland. Eur J Soil Biol 47:296–302. http://dx.doi.org/10.1016/j.ejsobi.2011.07.003
- Zumsteg A, Luster J, Göransson H, Smittenberg RH, Brunner I, Bernasconi SM, Zeyer J, Frey B. 2012. Bacterial, Archaeal and Fungal Succession in the Forefield of a Receding Glacier. Microb Ecol 63:552–64. https://doi.org/10.1007/s00248-011-9991-8

ecosystem-coupling

display_name: ecosystem-coupling

ecosystem-functions

display_name: ecosystem-functions

ecosystem-multifunctionality

display_name: ecosystem-multifunctionality

exclusion

display_name: exclusion

grassland

display_name: grassland

grazing

display_name: grazing

invertebrates

display_name: invertebrates

subalpine

display_name: subalpine

swiss-national-park

display_name: swiss-national-park

vertebrates

display_name: vertebrates

educ

en: Education, culture and sport

en: Ecosystem coupling and multifunctionality - exclosure experiment


maintainer: EnviDat Support

en: snow-ice-temperature snow-density weisfluhjoch snow-water-equivalent snow-stratigraphy

state: active

type: dataset

en: WFJ Snow Profiles 1999-2014

media_type: application/zip

en:
Biweekly manual snow profiles from Weissfluhjoch, Davos, Switzerland.
Version: 2015-09-14T16:25

format: ZIP

mimetype: application/zip

en: README

media_type: text/plain

en: README file giving use metadata.

format: TXT

en: Dataset of manual bi-weekly snow profiles from Weissfluhjoch, Davos, Switzerland. Typical snow profile measurements and observations are included (temperature, density, grain size, grain type, hardness, wetness), following the guidelines of the The International Classification for Seasonal Snow on the Ground (ICSSG) [Fierz, C., Armstrong, R.L., Durand, Y., Etchevers, P., Greene, E., McClung, D.M., Nishimura, K., Satyawali, P.K. and Sokratov, S.A. 2009. The International Classification for Seasonal Snow on the Ground. IHP-VII Technical Documents in Hydrology N°83, IACS Contribution N°1, UNESCO-IHP, Paris].

snow-density

display_name: snow-density

snow-ice-temperature

display_name: snow-ice-temperature

snow-stratigraphy

display_name: snow-stratigraphy

snow-water-equivalent

display_name: snow-water-equivalent

weisfluhjoch

display_name: weisfluhjoch

fr: Éducation, culture et sport

de: Bildung, Kultur und Sport

it: Istruzione, cultura e sport

envidat

fr: EnviDat: le portail de données environnementales

de: EnviDat: das Umwelt-Datenportal

en: EnviDat: the Environmental Data Portal

it: EnviDat: il portale dei dati ambientali

fr: EnviDat est le portail de données du WSL; il offre un accès uniformisé et réglementé aux données de surveillance et de recherche en matière d’environnement. Ce portail est capable d’héberger et de publier des ensembles de données précieuses et uniques, qui sont partagées aux quatre coins de la planète. Ce faisant, EnviDat favorise la recherche et contribue à l’avancement des sciences environnementales.

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

de: EnviDat ist das Datenportal der WSL für einen einheitlichen und verwalteten Zugang zu Umweltdaten aus Monitoring- und Forschungsprojekten. Auf dem Portal können Datensätze gehostet und veröffentlicht werden. Durch die weltweite Bereitstellung einzigartiger und wertvoller Datensätze leistet EnviDat einen Beitrag zur Forschung im Bereich der Umweltwissenschaften.

it: EnviDat è il portale dati del WSL che fornisce un accesso unificato e gestito ai dati di monitoraggio ambientale e di ricerca. Il portale ha la capacità di ospitare e pubblicare serie di dati preziosi e unici che vengono condivisi in tutto il mondo. Così facendo, EnviDat promuove la ricerca e contribuisce al progresso della scienza ambientale.

political_level: other

wsl

capacity: public

type: organization

approval_status: approved

key: guid

key: uri

value: Envidat Harvester

en: Manual bi-weekly snow profiles from Weissfluhjoch, Davos, Switzerland


soil-respiration-exclosure-experiment

title_for_slug: soil-respiration-exclosure-experiment

en: grazing ungulates grassland subalpine soil-respiration

en: Soil respiration Switzerland

en:
ID: Fence number

Year	:Year of sampling

mean.CO2: soil respiration measured with PP-systems SRC-1 soil respriation chamber attached to a EGM-4 infrared gas analyser; units CO2 g m-2 h-1

Grassland: Grasslands where fences were errected. Note that on large grasslands (STAB, GRIM, MING) 2 pairs of fences were errected (2 in short, 2 in tall-grass vegetation), on small grasslands (DADA, MARG, BOTS) only one pair of fences was errected (1 short-grass; one-tallgrass vegetation)

Fence: Fence number; un-even numbers on short-grass vegetation (1,3,5,7,9,11,13,15,17), even numbers on tall-grass vegetation (2,4,6,8,10,12,14,16,18)

Vegetation:	1 = shortgrass vegetation, 2 = tall-grass vegetation (9 replicate fences on each vegetation type)

Treatment	: 1 = all herbivores grazing, 2 = large ungulates (red deer, chamois) excluded

format: XLS

en:
Location of data collection
The Swiss National Park (SNP) is located in the southeastern part of Switzerland, and covers an area of 170 km2, 50 km2 of which is forested, 33 km2 is occupied by alpine and 3 km2 by subalpine grasslands. Elevations range from 1350 to 3170 m a.s.l., and mean annual precipitation and temperature are 871 mm and 0.6°C measured at the Park’s weather station in Buffalora (1980 m a.s.l.) between 1960 and 2009 (MeteoSchweiz 2011). Founded in 1914, the SNP received minimal human disturbance for almost 100 years (no hunting, fishing, or camping, visitors are not allowed to leave the trails). Large (> 1 ha) homogeneous patches of short- and tall-grass vegetation characterize the subalpine grasslands. The average vegetation height of short-grass vegetation is 2 to 5 cm. Red fescue (Festuca rubra L.), quaking grass (Briza media L.) and common bent grass (Agrostis tenuis Sipthrob) are the predominating plant species in this vegetation type. Tussocks of evergreen sedge (Carex sempervirens Vill.) and mat grass (Nardus stricta L.) are predominant in the tall-grass vegetation, which averages 20 cm in vegetation height (Schütz and others 2006). Short-grass vegetation developed in areas where cattle and sheep rested (high nutrient input) during agricultural land-use (from 14th century until 1914); tall-grass vegetation developed in areas where cattle and sheep used to graze, but did not rest (Schütz and others 2003, 2006). Herbivores were shown to consume > 60% of the biomass in short-grass compared to < 20% in tall-grass vegetation (Schütz and others 2006). The herbivore community present in the SNP can be divided into four groups based on body size/weight: large [red deer (Cervus elaphus L.) and chamois (Rupricapra rupricapra L.); 30 - 150 kg], medium [marmot (Marmota marmota L.) and snow hare (Lepus timidus L.); 3 – 6 kg], and small vertebrate herbivores (small rodents: e.g. Clethrionomys spp., Microtus spp., Apodemus spp.; 30 – 100 g) as well as invertebrates (e.g. grasshoppers, caterpillars, cicadas, < 5 g).

Experimental design
We selected 18 subalpine grassland sites (9 short-grass, 9 tall-grass vegetation). The sites were spread across the entire park on dolomite parent material at altitudes of 1975 to 2300 meters. At each site we established an exclosure network (fences) in spring 2009 (early June), immediately after snowmelt. Each exclosure network consisted of a total of five 2 × 3 m sized plots that progressively excluded the different herbivores listed above (further labeled according to the herbivore guilds that had access to the respective plots “All”, “Marmot/Mice/Invertebrates”, “Mice/Invertebrates”, “Invertebrates”, “None”). The “All” treatment was thus accessible to all herbivores, was not fenced and was located at least 5 m away from a 2.1 m tall and 7 × 9 m main fence that enclosed the other four treatments. This fence was constructed of 10 × 10 cm wooden posts and electrical equestrian tape (AGRARO ECO, Landi, Bern, Switzerland; 20 mm width) mounted at 0.7 m, 0.95 m, 1.2 m, 1.5 m and 2.1 m above the ground that were connected to a solar charged battery (AGRARO Sunpower S250, Landi, Bern, Switzerland). We also mounted non-electrically charged equestrian tape at 0.5 m to help exclude deer and chamois, yet allow marmots and hares to enter safely. Within each main fenced area we randomly established four 2 × 3 m plots: (1) The “Marmot/Mice/Invertebrates” plot remained unfenced, thus, with the exception of red deer and chamois, all herbivores were able to access the plot, (2) The “Mice/Invertebrates” plot consisted of a 90 cm high electric sheep fence (AGRARO Weidezaunnetz ECO, Landi, Bern, Switzerland; mesh size 10 × 10 cm) connected to the solar panel and excluded all medium sized mammals (marmots, hares), but provided access for small mammals and invertebrates, (3) The “Invertebrates” plot provided access for invertebrates only and was surrounded by 1 m high metal mesh (Hortima AG, Hausen, Schweiz; mesh size 2 × 2 cm), (4) The “None” plot was surrounded by a 1 m tall mosquito net (Sala Ferramenta AG, Biasca, Switzerland; mesh size 1.5 × 2 mm) to exclude all herbivores. This plot was covered with a roof constructed of a wooden frame lined with mosquito mesh that was mounted on the wooden corner posts. We also treated this plot with a biocompatible insecticide (Clean kill original, Eco Belle GmbH, Waldshut-Tiengen, Germany) when needed to remove insects that might have entered during data collection or that hatched from the soil.

!!! The here published data set only contains data for “All”, and “Marmot/Mice/Invertebrates” (= ungulates excluded) plots !!!

Data collection
In-situ soil CO2 emissions were measured with a PP-Systems SRC-1 soil respiration chamber (closed circuit) attached to a PP-Systems EGM-4 infrared gas analyzer (PP-Systems, Amesbury, MA, USA) on two randomly selected locations on one subplot within each of the 90 plots. For each measurement the soil chamber (15 cm high; 10 cm diameter) was placed on a permanently installed PVC collar (10 cm diameter) driven five centimeters into the soil at the beginning of the study (June 2009). The measurements were conducted between 0900 and 1700 hours every two weeks from early to early September 2009, 2010, 2011 and 2013. Freshly germinated plants growing within the PVC collars were removed prior to each measurement to avoid measuring plant respiration/photosynthesis. The two measurements collected per plot every two weeks were averaged.

Please acknowledge the funding of the study: funded by the Swiss National Science Foundation, SNF grant-no 31003A_122009/1 to Anita C. Risch, Martin Schütz and Flurin Filli

soil-respiration

display_name: soil-respiration

ungulates

display_name: ungulates

en: Soil respiration - exclosure experiment


maintainer: Leo Gallus Bont

en: openstreetmap accessible-forest seilaplan geoprocessing qgis forest

en: Forest vector data (for sample forest range)

en: Power lines vector data (close to the area of the sample forest range)

en: Preview

media_type: image/png

format: PNG

mimetype: image/png

en: DEM (for the area of the sample forest range)

media_type: image/tiff

format: TIFF

mimetype: image/tiff

en: Digitised sample perimeter

en: Railways vector data (close to the sample forest range)

en: Juypter Notebook for Data Preparation

format: SERVICE

en: Juypter Notebook for Data Preparation (online)

en:
This dataset contains open vector data for railways, forests and power lines, as well an open digital elevation model (DEM) for a small area around a sample forest range in Europe (Germany, Upper Bavaria, Kochel Forest Range, some 70 km south of München, at the edge of Bavarian Alps).
The purpose of this dataset is to provide a documented sample dataset in order to demonstrate geospatial preprocessing at FOSS4G2019 based on open data and software. This sample has been produced based on several existing open data sources (detailed below), therefore documenting the sources for obtaining some data needed for computations related to forest accessibility and wood harvesting. For example, they can be used with the open methodology and QGIS plugin [Seilaplan]( https://doi.org/10.16904/envidat.software.1) for optimising the geometric layout cable roads or with additional open software for computing the forest accessibility for wood harvesting.
The vector data (railways, forests and power lines) was extracted from OpenStreetMap (data copyrighted OpenStreetMap contributors and available from https://www.openstreetmap.org). The railways and forests were downloaded and extracted on 18.05.2019 using the open sources QGIS (https://www.qgis.org) with the QuickOSM plugin, while the power lines were downloaded a couple of days later on 23.05.2019.

Additional notes for vector data:
Please note that OpenStreeMap data extracts such as forests, roads and railways (except power lines) can also be downloaded in a GIS friendly format (Shapefile) from http://download.geofabrik.de/ or using the QGIS built-in download function for OpenStreetMap data. The most efficient way to retrieve specific OSM tags (such as power=line) is to use the QuickOSM plugin for QGIS (using the Overpass API - https://wiki.openstreetmap.org/wiki/Overpass_API) or directly using overpass turbo (https://overpass-turbo.eu/). Finally, the digitised perimeter of the sample forest range is also made available for reproducibility purposes, although any perimeter or area can be digitised freely using the QGIS editing toolbar.

The DEM was originally adapted and modified also with QGIS (https://www.qgis.org) based on the elevation data available from two different sources, by reprojecting and downsampling datasets to 25m then selecting, for each individual raster cell, the elevation value that was closer to the average. These two different elevation sources are:

- Copernicus Land Monitoring Service - EU-DEM v.1.1 (TILE ID E40N20, downloaded from https://land.copernicus.eu/imagery-in-situ/eu-dem/eu-dem-v1.1; this original DEM was produced by the Copernicus Land Monitoring Service “with funding by the European Union” based on SRTM and ASTER GDEM)
- Digitales Geländemodell 50 m Gitterweite (https://opendata.bayern.de/detailansicht/datensatz/digitales-gelaendemodell-50-m-gitterweite/), produced by the Bayerische Vermessungsverwaltung – www.geodaten.bayern.de –and downloaded from http://www.geodaten.bayern.de/opendata/DGM50/dgm50_epsg4258.tif

This methodology was chosen as a way of performing a basic quality check, by comparing the EU-DEM v.1.1 derived from globally available DEM data (such as SRTM) with more authoritative data for the randomly selected region, since using authoritative data is preferred (if open and available). For other sample regions, where authoritative open data is not available, such comparisons cannot longer be performed.

Additional notes DEM: a very good DEM open data source for Germany is the open data set collected and resampled by Sonny (sonnyy7@gmail.com) and made available on the Austrian Open Data Portal http://data.opendataportal.at/dataset/dtm-germany. In order to simplify end-to-end reproducibility of the paper planned for FOSS4G2019, we use and distribute an adapted (reprojected and resampled to 25 meters) sample of the above mentioned dataset for the selected forest range.

This sample dataset is accompanied by software in Python, as a Jupiter Notebook that generates harmonized output rasters with the same extent from the input data. The extent is given by the polygon vector dataset (Perimeter). These output rasters, such as obstacles, aspect, slope, forest cover, can serve as input data for later computations related to forest accessibility and wood harvesting questions. The obstacles output is obtained by transforming line vector datasets (railway lines, high voltage power lines) to raster. Aspect and slope are both derived from the sample digital elevation model.

accessible-forest

display_name: accessible-forest

forest

display_name: forest

geoprocessing

display_name: geoprocessing

openstreetmap

display_name: openstreetmap

qgis

display_name: qgis

seilaplan

display_name: seilaplan

en: Sample Geodata and Software for Demonstrating Geospatial Preprocessing for Forest Accessibility and Wood Harvesting at FOSS4G2019


en: terrestrial-laser-scans gridded-data antarctica depth-of-snowfall terrestiral-laserscanning

en: Scan from 11 January 2019, 1 mm resolution

en: Scan from 27 December 2018, 10 cm resolution

en: Scan from 2 January 2019, 1 mm resolution

en: Scan from 4 January 2019, 10 cm resolution

en: Scan from 4 January 2019, 1 mm resolution

en: Scan from 21 December 2018, 1 mm resolution

en: Scan from 11 January 2019, 10 cm resolution, version 2

en: Deprecated: Scan from 11 January 2019, 10 cm resolution, version 1

en: This resource is deprecated. It contains erroneous data.

en: Scan from 2 January 2019, 10 cm resolution

en: Scan from 21 December 2018, 10 cm resolution

en: Scan from 27 December 2018, 1 mm resolution

en:
Surface topography maps (spatial extent: 400 m x 400 m) obtained at approximately 300 m from the top of the Hammarryggen Ice Rise in Dronning Maud Land, East Antarctica, using a Riegl VZ-6000 Terrestrial Laser Scanner (TLS). Scans were obtained on 5 days in the 2018-2019 Austral summer: on December 21 and 27, and January 2, 4 and 11. By using reflectors installed on bamboo poles, scans were registered with respect to the reflectors, such that the difference between two successive scans reveals the spatial patterns of erosion and deposition of snow. On each scan day, we used multiple scan positions to create one combined point cloud. After applying an octree filter on the point cloud, a 3D surface was obtained. For each day, the dataset contains a 1 mm and a 10 cm octree filter resolution file, only including points in a 400 m x 400 m area centered around the scan positions.

Notes:

* All files in the dataset are in the same coordinate system. However, this coordinate system is arbitrary (i.e., not related to any global coordinate system).

* From the installed reflectors, 4 reflectors could be used over the full period. The scan accuracy is generally higher within the area enclosed by the reflectors.

* The scans from January 2 were found to have exhibited small tilt during the scan and are of lesser accuracy.

* By walking along fixed corridors, disturbance of the snow was limited.

antarctica

display_name: antarctica

depth-of-snowfall

display_name: depth-of-snowfall

gridded-data

display_name: gridded-data

terrestiral-laserscanning

display_name: terrestiral-laserscanning

terrestrial-laser-scans

display_name: terrestrial-laser-scans

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Terrestrial laser scans on Hammarryggen Ice Rise, Dronning Maud Land, East Antarctica


en: forest fractional-snow shortwave-radiation longwave-radiation shading

en: Radiation Data 25.4.2018

en:
Spatiotemporal incoming/outgoing shortwave and longwave radiation as well as sunlit and shaded-snow view fractions below an evergreen forest stand in the Swiss alps. Data was collected on 25th of April 2018 along a 48m long, heterogeneous forest stand under partial snow cover conditions.

The presented data is used and further described in the following paper: Malle et al. (2019). Shading by Trees and Fractional Snow Cover control the Subcanopy Radiation Budget. Journal of Geophysical Research Atmospheres. DOI:10.1029/2018JD029908.

en: Radiation Data 18.04.2019

en:
Spatiotemporal incoming/outgoing shortwave and longwave radiation as well as sunlit and shaded-snow view fractions below an evergreen forest stand in the Swiss alps. Data was collected on 18th of April 2018 along a 48m long, heterogeneous forest stand under full snow cover conditions.

The presented data is used and further described in the following paper: Malle et al. (2019). Shading by Trees and Fractional Snow Cover control the Subcanopy Radiation Budget. Journal of Geophysical Research Atmospheres. DOI:10.1029/2018JD029908.

en: Sky-view fraction along the cablecar transect

en: Data is used and described in the following paper: Malle et al. (2019). Shading by Trees and Fractional Snow Cover control the Subcanopy Radiation Budget. Journal of Geophysical Research. DOI:10.1029/2018JD029908.

mimetype: text/plain

en: Seasonal sub-canopy radiation data

en:
Seasonal, spatially aggregated incoming and outgoing shortwave radiation below an evergreen forest stand collected with a cable car system.

The presented data is used and further described in the following paper: Malle et al. (2019). Shading by Trees and Fractional Snow Cover Control the Subcanopy Radiation Budget. Journal of Geophysical Research Atmospheres. DOI:10.1029/2018JD029908.

en: This data set consists of incoming and outgoing short- and longwave radiation as well as sunlit-snow-view-fraction as described in the JGR-Atmospheres paper "Shading by trees and fractional snow cover control the sub-canopy radiation budget", by Malle et al. (2019). Data was collected along a 48m long, heterogeneous forest transect between January and June 2018 close to Davos, Switzerland.

fractional-snow

display_name: fractional-snow

longwave-radiation

display_name: longwave-radiation

shading

display_name: shading

shortwave-radiation

display_name: shortwave-radiation


maintainer: Anita C. Risch

en: grassland ammonification nutrient-network soil nitrogen herbivore fertilization mineralization global-change climate nitrification

en: Risch et al. 2020 - Raw data for publication "Global impacts of fertilization and herbivore removal on soil net nitrogen mineralization are modulated by local climate and soil properties"

en:
we assessed how the removal of mammalian herbivores (Fence) and fertilization with growth-limiting nutrients (N, P, K, plus nine essential macro- and micronutrients; NPK) individually, and in combination (NPK+Fence), affected potential and realized soil net Nmin across 22 natural and semi-natural grasslands on five continents. Our sites spanned a comprehensive range of climatic and edaphic conditions found across the grassland biome. We focused on grasslands, because they cover 40-50% of the ice-free land surface and provide vital ecosystem functions and services. They are particularly important for forage production and C sequestration. Worldwide, grasslands store approximately 20-30% of the Earth’s terrestrial C, most of it in the soil (Schimel, 1995; White et al., 2000).

Study sites and experimental design
The 22 sites contributing to this project are part of the Nutrient Network Global Research Cooperative (NutNet, https://nutnet.umn.edu/). Mean annual temperature across our 22 sites ranged from -4 to 22°C, mean annual precipitation from 252 to 1,592 mm, and elevations from 6 to 4,261 m above sea level (Fig. 1, Supplementary Table S1). Soil organic C varied from 0.8 to 7.8%, soil total N from 0.1 to 0.6%, and the soil C:N ratio from 9.1 to 21.5. Soil clay content spanned from 3.0 to 35%, and soil pH from 3.4 to 7.6 (Supplementary Table S2). Thus, the sites covered a wide range of environments in which grasslands occur (Fig. 1, Supplementary Table S1 & S2).
At each site, the effects of nutrient addition and herbivore removal were tested via a randomized-block design (Borer et al., 2014; Supplementary Fig. S1a). Three replicate blocks with 10 treatment plots each were established at each site, with the exception of the site at bldr.us, where only two blocks were established (Supplementary Fig. S1a). The 10 plots were randomly assigned to a nutrient or fencing treatment, but only a subset of four plots was used in the current study, each with a different treatment (see below; Supplementary Fig. S1a). All plots were 5 x 5 m and divided into four 2.5 x 2.5 m subplots (Supplementary Fig. S1b). Each subplot was further divided into four 1 x 1 m square sampling plots, one of which was set aside for soil sampling (Borer et al., 2014; Supplementary Fig. S1b). Plots were separated by at least 1 m wide walkways.
In this study, we collected data from the following four treatments: (i) untreated control plots (Control), (ii) herbivore removal plots (Fence), (iii) plots fertilized with N, P, K, plus nine essential macro and micronutrients (NPK), and (iv) plots with simultaneous fertilizer addition and herbivore removal (NPK+Fence; Supplementary Fig. S1a). The number of years of treatment differed among sites (2 – 9 years since start of treatment; Supplementary Table S1). For the nutrient additions, all sites applied 10 g N m-2 yr-1 as time-release urea; 10 g P m-2 yr-1 as triple-super phosphate; 10 g K m-2 yr-1 as potassium sulfate. A micro-nutrient mix (Fe, S, Mg, Mn, Cu, Zn, B, Mo, Ca) was applied at 100 g m-2 together with K in the first year of treatments but not thereafter.
The vertebrate herbivore removal treatment (Fence) was established by fencing two plots, one control and one NPK plot, within each of the blocks (Supplementary Fig. S1a). We designed the fences so that they would effectively exclude aboveground mammalian herbivores with a body mass of over 50 g (Borer et al., 2014). At the majority of sites, the height of the fences was 180 cm, and the fence design included wire mesh (1 cm holes) on the first 90 cm along with a 30 cm outward-facing flange stapled to the ground to exclude burrowing animals; climbing and subterranean animals may potentially still access these plots (Borer et al., 2014). For slight modifications in fence design at a few sites see Supplementary Table S3. While most sites only had native herbivores, a few sites (4) were also grazed by domestic animals (Supplementary Table S1).
Potential and realized soil net N mineralization, ammonification, nitrification and other soil properties
Each site participating in the study received a package containing identical material from the Swiss Federal Institute for Forest, Snow and Landscape Research (WSL) to be used for sampling and on-site N incubations. For the field incubation, we followed the protocol by Risch et al. (2015, 2019). Briefly, we drove a 5 x 15 cm (diameter x depth) steel cylinder 13.5 cm deep into the soil after clipping the vegetation at randomized locations in each plot. The top 1.5 cm of the cylinder remained empty to capture incoming N from run-off or deposition with a polyester mesh bag (mesh-size 250 µm) filled with 13.2 ± 0.9 g of acidic and alkaline exchanger resin (1:1 mixture; ion-exchanger I KA/ion-exchanger III AA, Merck AG, Darmstadt). The bag was fixed in place with a metal Seeger ring (Bruetsch-Rüegger Holding, Urdorf, Switzerland). We then removed 1.5 cm soil at the bottom of the cylinder and placed another resin bag to capture N leached from the soil column. The exchange resin was saturated with H+ and Cl- prior to filling the bags by stirring the mixture in 1.2M HCl for 1 h and then rinsing it with demineralized water until the electrical conductivity of the water reached 5 μS/cm. The cylinders were then re-inserted into the cored hole, level with the soil surface, and incubated for an average of 42 days (range 40 to 57days). The individual site coordinators chose the timing of incubation to start approximately six weeks prior to peak plant biomass production. All incubations were completed between February 2015 and January 2016 accounting for differences in growing season between northern and southern hemispheres. At the end of the incubation, the cylinders were re-collected and immediately shipped to WSL in an insulated box together with cold packs to halt further mineralization. Gloves were worn at all times to avoid contamination of the samples. Upon arrival at WSL, we extracted the resin bags and a 20 g subsample of sieved soil (4 mm) separately in a 100 ml PE-bottle with 80 ml 1 M KCl for 1.5 h on an end-over-end shaker and filtered through ashless folded filter paper (DF 5895 150, ALBET LabScience). We measured NO3- (colorimetrically; Norman & Stucki, 1981) and NH4+concentrations (flow injection analysis; FIAS 300, Perkin Elmer) on these filtrates.
At the start of the field incubation, we additionally collected two soil cores of 5 x 12 cm (diameter x depth) in each sampling plot and composited them to measure potential soil net Nmin, soil chemical and biological properties (see below). We also collected an additional sample (5 x 12 cm) to assess soil physical properties, which remained within the steel cylinder. Both ends were tightly closed with plastic caps. Cores were carefully packed to avoid further disturbance, and together with the composited soil samples, were shipped to the laboratory at WSL within a few days after collection.
From the composited samples, we extracted an equivalent of 20 g dry soil with KCl, as described above, and measured NO3- and NH4+concentrations. Realized soil net Nmin was then calculated as the difference between the inorganic N content of samples collected at the end of the incubation (plus N extracted from the bottom resin bag) and the N content at the beginning of the incubation; values were scaled to represent daily mineralization rates (mg N kg-1soil d-1; Risch et al., 2015). Realized soil net Nmin values represent an average period of 42 days prior to peak biomass, typically the highest period of biological activity, and not the entire year (Risch et al., 2019).
A second subsample of the composited sample was used to determine potential soil net Nmin in the laboratory (Risch et al., 2019). Briefly, we weighed duplicate samples (8 g dry soil) into 50-ml Falcon tubes. Soil moisture was brought to 60% of the field capacity of each plot, the Falcon tubes tightly closed and then incubated at 20°C for 42 days in a dark room. Every week the Falcon tubes were opened and ventilated. At the end of the incubation, the soil samples were extracted the same way as described above and NO3- and NH4+ was determined. Potential soil net Nmin was calculated as the difference between the N content before and after the incubation and scaled to represent daily values (mg N kg-1soil d-1). Using our NO3- and NH4+ measures we also calculated potential and realized soil net nitrification and soil net ammonification to be able to better understand the drivers of fertilization and herbivore removal effects on potential and realized soil net Nmin.
A third subsample of the composite soil sample was sieved (2 mm mesh) and microbial biomass (μg Cmic g-1 soil dry weight) was estimated by measuring the maximal respiratory response to the addition of glucose solution (4 mg glucose per g soil dry weight dissolved in distilled water; substrate-induced respiration method) on approximately 5.5 g of soil (Anderson & Domsch, 1978). The rest of the composited sample was dried at 65°C for 48 h, ground and sieved (2 mm mesh) to assess a series of soil chemical properties (Risch et al., 2019). We measured the percentage of clay as an indicator of soil texture (Gee & Bauder, 1986; Risch et al., 2019).
Statistical analyses
Potential and realized soil net Nmin were square root transformed to account for a highly skewed data distribution (yt = sign(y)*sqrt|y|; negative values in the data set impeded log transformation). To assess treatment effects on potential and realized soil net Nmin, we used linear mixed effects models (LMMs) fitted by maximum likelihood using the lme function from the nlme package (version 3.131.1; Pinheiro et al., 2016), R version 3.6.1; R Foundation for Statistical Computing. Treatment (Control, Fence, NPK, NPK+Fence) was a fixed factor, with site and block as random factors, where block was nested within site. We also tested for effects of time since start of treatments in preliminary analyses by adding total treatment years as an additional fixed factor. We did not find a significant effect of years of treatment, and thus dropped this variable from the models. The LMMs were corrected using varIdent if the homogeneity of variance criterion was not met (Pinheiro et al., 2016). To visualize our results, we calculated treatment effects using Cohens’ d statistic (Cohen, 1977; Koricheva et al., 2013). Note that calculating response ratios (or log response ratios) was not possible with our data, as we have both negative and positive values. We also fitted LMMs for potential and realized soil net ammonification and nitrification to gain more insight into how global change affects the processes underpinning potential and realized soil net Nmin. We also sqrt-transformed (see above) these dependent variables. Treatment was included as a fixed factor with random factors as described above. In addition, we assessed how potential and realized soil net Nmin were related to potential and realized soil net ammonification and nitrification, respectively. For this, we calculated site averages for each treatment separately. We then ran LMMs, with potential and realized soil net Nmin as the dependent variable, potential and realized soil net ammonification/nitrification as the independent ones. Site was included as a random factor.
Based on our previous work (Risch et al., 2019) and the existing literature (Schimel & Bennett, 2004; Liu et al., 2017), we developed a priori causal conceptual models of relationships among treatments, environmental drivers, and potential and realized soil net Nmin (Supplementary Fig. S2) to test with structural equation modelling (SEM) using a d-sep approach (Shipley, 2009; Lefcheck, 2016). The variables included in the model were long-term climatic conditions, specifically, site-level mean annual precipitation (MAP) and temperature of the wettest quarter (T.q.wet), plot-level soil texture (clay content) and soil microbial biomass. Mean annual precipitation and T.q.wet were obtained from WorldClim (Hijmans et al., 2005) (http://www.worldclim.org/) and together with the experimental treatments were predicted to directly affect soil properties and soil net Nmin (Supplementary Fig. S2). Soil clay content was, in turn, predicted to affect microbial biomass and soil net Nmin. Because we determined microbial biomass prior to incubating the samples in the laboratory or field, we assumed that the abundance of these microbes would be responsible for N process rates and not vice versa (Supplementary Fig. S2). We tested our conceptual model (Supplementary Fig. S2) using the piecewiseSEM package (version 2.0.2; Lefcheck, 2016) in R 3.4.0, in which a structured set of linear models are fitted individually. This approach allowed us to account for the nested experimental design, and overcome some of the limitations of standard structural equation models, such as small sample sizes (Shipley, 2009; Lefcheck, 2016). We used the lme function of the nlme package to model response variables, including site as a random factor. Good fit of the SEM was assumed when Fisher’s C values were non-significant (p > 0.05). For all significant interactions between covariates and experimental treatments detected in the SEMs, we calculated treatment effect sizes, i.e. the differences in potential or realized soil net Nmin between Control and treatments (Fence, NPK, NPK+Fence) and plotted these values against the climate or soil covariates. Finally, we fitted LMMs for the soil variables included in our SEMs, with treatment as the fixed factor, and with site and block as random factors, where block was nested within site.

en:
This dataset contains all data on which the following publication below is based.

Paper Citation:

Risch Anita C., Zimmermann, Stefan, Moser, Barbara, Schütz, Martin, Hagedorn, Frank, Firn, Jennifer, Fay, Philip A., Adler, Peter B., Biederman, Lori A., Blair, John M., Borer, Elizabeth T., Broadbent, Arthur A.D., Brown, Cynthia S., Cadotte, Marc W., Caldeira, Maria C., Davies, Kendi F., di Virgilio, Augustina, Eisenhauer, Nico, Eskelinen, Anu, Knops, Johannes M.H., MacDougall, Andrew S., McCulley, Rebecca L., Melbourne, Brett A., Moore, Joslin L., Power, Sally A., Prober, Suzanne M., Seabloom, Eric W., Siebert, Julia, Silveira, Maria L. , Speziale, Karina L., Stevens, Carly J., Tognetti, Pedro M., Virtanen, Risto, Yahdjian, Laura, Ochoa-Hueso, Raul (accepted). Global impacts of fertilization and herbivore removal on soil net nitrogen mineralization are modulated by local climate and soil properties. Global Change Biology

Please cite this paper together with the citation for the datafile.

We assessed how the removal of mammalian herbivores (Fence) and fertilization with growth-limiting nutrients (N, P, K, plus nine essential macro- and micronutrients; NPK) individually, and in combination (NPK+Fence), affected potential and realized soil net Nmin across 22 natural and semi-natural grasslands on five continents. Our sites spanned a comprehensive range of climatic and edaphic conditions found across the grassland biome. We focused on grasslands, because they cover 40-50% of the ice-free land surface and provide vital ecosystem functions and services. They are particularly important for forage production and C sequestration. Worldwide, grasslands store approximately 20-30% of the Earth’s terrestrial C, most of it in the soil (Schimel, 1995; White et al., 2000).

ammonification

display_name: ammonification

climate

display_name: climate

fertilization

display_name: fertilization

global-change

display_name: global-change

grassland

display_name: grassland

herbivore

display_name: herbivore

mineralization

display_name: mineralization

nitrification

display_name: nitrification

nitrogen

display_name: nitrogen

nutrient-network

display_name: nutrient-network

soil

display_name: soil

en: Anthropogenic change and soil net N mineralization


envidat-supports-open-science

maintainer: Ionut Iosifescu Enescu

title_for_slug: envidat-supports-open-science

en: envidat juypter-notebooks open-science wsl research-data-management

en: Article as PDF

media_type: application/pdf

format: PDF

mimetype: application/pdf

en:
The article "EnviDat Supports Open Science" originally appeared in WSLintern No. 3 (2020), page 14-15 and it is republished here with permission from the WSLintern editorial team. It contains guidelines for WSL scientists about the main issues behind Open Science and how to pragmatically approach the complexities of doing Open Science with EnviDat’s support.

License: This article is released by WSL and the EnviDat team to the public domain under a Creative Commons 4.0 CC0 "No Rights Reserved" international license. You can reuse the information contained herein in any way you want, for any purposes and without restrictions.

envidat

display_name: envidat

juypter-notebooks

display_name: juypter-notebooks

open-science

display_name: open-science

research-data-management

display_name: research-data-management

wsl

display_name: wsl

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: EnviDat Supports Open Science


en: grassland global soil-biology soil-chemistry worldwide mineralization soil nutrient-network

en:
site.code: Site code

Continent: Continent

sampleID: Sample ID

nn.latitude: Lattitude

nn.longitude: Longitude

bioclim.T.ann: Mean annual temperature (°C)

bioclim.T.var: Temperature variability (°C)

bioclim.T.q.wet: Temperature of the wettest quarter (°C)

bioclim.T.q.dry: Temperature of the driest quarter (°C)

bioclim.T.q.warm: Temperature of the warmest quarter (°C)

bioclim.P.ann: Mean annual preciptiation (mm)

bioclim.P.q.wet: Precipitation of the wettest quarter (mm)

ch.pH: pH

ch.WSK.vol: Water holding capacity (vol%)

ch.bulkdensity.gcm3: Bulk density (g cm-3)

ch.porespace: Pore space (vol%)

ch.sand.perc: Soil texture: sand (%)

ch.silt.perc: Soil texture: silt (%)

ch.clay.perc: Soil texture: clay (%)

ch.NO3start.mgg: NO3 at the beginning of the incubation (mgkg)

ch.Ntot.perc: Total soil N (%)

ch.Ctot.perc: Total soil C (%)

ch.Corg.perc: Soil organic C (%)

ch.netNminfield.mgkgd: Realised soil net N mineralisation (mg kg-1 d-1)

ch.netNminlab.mgkgd: Potential soil ne N mineralisation (mg kg-1 d-1)

archaea.cpg.log: Ammonia oxidising archaea (archaeal amoA gene copies g-1 soil)

bacteria.cpg.log: Ammonia oxidising bacteria (bacterial amoA gene copies g-1 soil)

micr.biom: Microbial biomass (ug g-1 soil)

ch.CtoN: C to N ratio

ch.netNnitriffield.mgkgd.sqrt: Realised soil net nitrification, transformed (mg kg-1 d-1)

ch.netNammoniffield.mgkgd.sqrt: Realised soil net ammonification, transformed (mg kg-1 d-1)

ch.netNnitriflab.mgkgd.sqrt: Potential soil net nitrification, transformed (mg kg-1 d-1)

ch.netNammoniflab.mgkgd.sqrt: Potential soil net ammonifiation, transformed (mg kg-1 d-1)

en:
This dataset contains all data on which the following publication below is based.

Paper Citation:

Risch, A. C.; Zimmermann, S.; Ochoa-Hueso, R.; Schütz, M.; Frey, B.; Firn, J. L.; Fay, P. A.; Hagedorn, F.; Borer, E. T.; Seabloom, E. W.; et al. Soil net nitrogen mineralisation across global grasslands. Nat. Commun. 2019, 10 (1), 4981 (10 pp.). doi.org/10.1038/s41467-019-12948-2

Please cite this paper together with the citation for the datafile.

We conducted coordinated measurements of realised and potential soil net Nmin, and assessed water holding capacity, bulk density, C and N content, texture, pH, pore space, microbial biomass, and archaeal (AOA) and bacterial (AOB) ammonia oxidiser abundance using identical materials and methods across 30 grasslands on six continents. The sites covered a globally relevant range of climatic and edaphic conditions. Climate data was obtained from worldclim - Global climate data https://www.worldclim.org/

global

display_name: global

soil-biology

display_name: soil-biology

soil-chemistry

display_name: soil-chemistry

worldwide

display_name: worldwide


maintainer: Marcia Phillips

en: permos borehole permafrost meteo-station ritigraben

en: DATA ACCESS

en: Meterological station at the [Ritigraben permafrost borehole](http://www.envidat.ch/dataset/rit1) (RIT_0102) in canton Valais, Switzerland. The station is located at 2690 m asl on a flat site.

borehole

display_name: borehole

meteo-station

display_name: meteo-station

permafrost

display_name: permafrost

permos

display_name: permos

ritigraben

display_name: ritigraben

en: RIT2: Meteorological station at Ritigraben borehole site


maintainer: Christoph Marty

en: snowfall snow climate-change-impacts water-cycle hydrology

en: Synthesis report chapter

en: DORA Persistent URL

en:
This report was prepared as one of the synthesis report chapters of the Hydro-CH2018 project of the Federal Office for the Environment (FOEN). An important feature of snow cover is the fact that its volume and duration is subject to large year-to-year fluctuations. As frozen precipitation, snow cover is nothing other than a natural water reservoir that delays precipitation to runoff and is thus of outstanding importance for the seasonal water balance in Switzerland. Over a whole year, approximately 40% (22 km3) of the annual runoff currently comes from snow melting and only 1% from glacier melting. Typically, the snow cover in the Alpine region builds up over the autumn and winter months, reaches its maximum between February and May, depending on the altitude, and dominates the runoff processes during melting in the following spring and summer months.
Due to the great dependence on minus temperatures and precipitation, the snow cover reacts sensitively to temperatures above 0° Celsius and more or less precipitation. Due to climate change and the associated warming, the proportion of precipitation that falls as snow decreases measurably. In addition to this reduction in snowfall, the warmer temperatures also cause the snow cover to melt more quickly. The decline in snowfall has so far mainly affected lower altitudes, where winter temperatures often reach positive levels.
As climate change progresses, this trend is likely to continue and above all affect higher zones. Even at higher altitudes, the snow cover will then start later, melt away earlier and is increasingly no longer permanently present. This development will also have an effect on the water bodies. Today nival regimes, i.e. regimes shaped by snow, are shifting towards pluvial regimes, i.e. regimes dominated by rain. Overall, winter runoff increases, summer runoff decreases. By the end of the century, the proportion of runoff from snowmelt will decrease throughout Switzerland, albeit to a lesser extent than the proportion from glacier melt.

climate-change-impacts

display_name: climate-change-impacts

hydrology

display_name: hydrology

snow

display_name: snow

snowfall

display_name: snowfall

water-cycle

display_name: water-cycle

en: Snow and the water cycle in a changing climate


maintainer: Matthias Haeni

en: relative-humidity precipitation meteo meteorology wind-speed par climate-change long-term swiss-forest-lab temperature

en: Site photo of the forest station (ISB)

en: Site photo of the forest station from below (viewing upwards the slope).

mimetype: image/jpeg

en: Site aerial photo (Isone)

en: Site aerial photo from both Isone stations. Source: Google. 2016. Site aerial photo from both Isone stations. Retrieved November 11, 2016, from https://www.google.ch/maps

en: Forest station data (ISB)

media_type: text/csv

en: Data file.

format: CSV

mimetype: text/csv

en: Field station data (ISF)

en: Site photo of the field station (ISF)

en: Site photo of the field station from the side.

en: Data plot of the forest station (ISB)

en: Data overview for air temperature, relative humidity, precipitation, PAR, wind speed.

en: Data plot of the field station (ISF)

en: High quality meteorological data are needed for long-term forest ecosystem research, particularly in the light of global change. The long-term data series published here comprises almost 20 years of measurements for two meteorological stations in Isone in Switzerland where one station is located within a natural broad-leaved forest stand (ISB) with European beech (_Fagus sylvatica_; 70-100 yrs) as dominant tree species. A second station is situated in the very vicinity outside of the forest (field station, ISF). The meteorological time series are presented in hourly time resolution of air temperature, relative humidity, precipitation, photosynthetically active radiation (PAR) and wind speed. Isone is part of the Long-term Forest Ecosystem Research Programme (LWF) established and maintained by the Swiss Federal Research Institute WSL.

climate-change

display_name: climate-change

long-term

display_name: long-term

meteo

display_name: meteo

meteorology

display_name: meteorology

par

display_name: par

precipitation

display_name: precipitation

relative-humidity

display_name: relative-humidity

swiss-forest-lab

display_name: swiss-forest-lab

temperature

display_name: temperature

wind-speed

display_name: wind-speed

en: Isone, Switzerland: Long-term forest meteorological data from the Long-term Forest Ecosystem Research Programme (LWF), from 1997 onwards


tree-ring-laser-ablation-data

maintainer: Paula Ballikaya

title_for_slug: tree-ring-laser-ablation-data

en: tree-rings dendrochemistry dendrochronology laser-ablation air-pollution

en: Laser ablation data

en:
This dataset contains the values of several chemical elements (Mg, Al, Si, S, K, Ca, Ti, Cr, Mn, Fe, Co, Ni, Cu, Zn, As, Sr, Tl, Pb, Bi) measured in the latewood of tree rings of Mongolian oak from Harbin, China, at a 5-year resolution. Due to the lack of a suitable reference material for wood, absolute concentration was not calculated, and the ratio between the chemical element and 13C was taken as proxy for the element signal.

In Harbin, one of the largest cities and most important industrial centers in northeastern China, air quality monitoring systems were built only by the end of 2015 to meet the national requirements. Thus, dendrochemical analyses could be used as a tool to complement for the lack of air quality data over longer periods of time, allowing for the reconstruction of the temporal trend of trace metals. Our main scopes were to: (a) assess the chemical composition of Quercus mongolica Fisch. ex Ledeb. tree rings from Harbin using a recently developed system of laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS), (b) identify the main chemical elements which
derived from air pollution and may be used as indicators over the period 1965–2020 in Harbin, while excluding those that were controlled by physiological processes in the tree, and (c) reconstruct the history of pollution in Harbin by comparing the tree-ring chemical composition of recent decades with that of previous decades, in trees growing in the highly polluted city of Harbin and in trees growing in a control site 90 km away from major pollution sources.

Briefly, the temporal trend of some elements was influenced by physiological factors, by environmental factors such as pollution, or influenced by both. Mg, K, Zn, Cu, Ni, Pb, As, Sr and Tl showed changes in pollution levels over time.

air-pollution

display_name: air-pollution

dendrochemistry

display_name: dendrochemistry

dendrochronology

display_name: dendrochronology

laser-ablation

display_name: laser-ablation

tree-rings

display_name: tree-rings

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Tree-ring laser ablation data


maintainer: Rebecca Mott

en: patchy-snow-covers tls terrestrial-laser-scanning riegl-vz6000 snow-ablation-rates

en: Gletschboden test site

en: Snowmask 2015

en: Digital Elevation Modell 2014

en: Snowmask 2014

en: Digital Elevation Modell 2015

en: Digital Elevation Modell 2016

en: Snowmask 2016

en: We recorded snow ablation maps with a terrestrial laser scanner (TLS, Riegl-VZ6000) at the Gletschboden area. The TLS position is located approximately 30 vertical meters above the Gletschboden area at a northerly exposed slope. In total 44 TLS measurement sets have been conducted in three consecutive years 2014-2016 (2014: 13 measurements; 2015: 17 measurements; 2016: 14 measurements). The TLS system has a single-point measurement frequency of 300 kHz and a beam divergence of 0.007°. This set-up allows a horizontal resolution of approximately 0.01 m in 100 m distance to the TLS position. One scan of the Gletschboden area lasts approximately 15 minutes. The travel time from the laser scanner towards the surface is recorded and afterwards converted into a point cloud of distances. 5 reflectors located at the Gletschboden area and in the closer surroundings were additionally scanned during each measurement to transform the point cloud from the scanner own coordinate system into Swiss coordinates. Additionally, orthophotos have been created by using pictures recorded from the TLS in order to provide snow mask maps. Snow and bare ground can be distinguished by the RGB color information of the orthophoto. Cells with blue band information greater than 175 were categorized as snow and all cells with values smaller or equal 175 were categorized as bare ground.

patchy-snow-covers

display_name: patchy-snow-covers

snow-ablation-rates

display_name: snow-ablation-rates

terrestrial-laser-scanning

display_name: terrestrial-laser-scanning

tls

display_name: tls

en: DISCHMEX - High-resolution daily snow ablation rates in an Alpine environment


wind-lidar-davos-wolfgang

title_for_slug: wind-lidar-davos-wolfgang

en: wind wolfgangpass raclets lidar profiles

en: Wind LIDAR data Wolfgang

en: A Leosphere WidCube 100S was deployed at Davos Wolfang, measuring wind profiles as well as performing PPI and RHI scans. Time format is in UTC with highest time resolution of 5 seconds.

en: Scanning wind Lidar from Meteoswiss was installed at Davos Wolfgang (LON: 9.853594, LAT: 46.835577) and measured from 200 m above ground to 8100 m. The time resolution is up to 5 seconds. The Lidar was measuring wind profiles but also performed plan position indicator (PPI) and range height indicator (RHI) scans.

lidar

display_name: lidar

profiles

display_name: profiles

raclets

display_name: raclets

wind

display_name: wind

wolfgangpass

display_name: wolfgangpass

en: Wind LIDAR Davos Wolfgang


en: snow-mechanics compression-experiments snow x-ray-tomography microstructure

en: README

en: README file explaining the organization of the data

en: Snowmicroquakes Data

en: Compression experiments, X-ray images and simulation data with supplemented README file

en:
When snow is compressed with a certain speed, micro-snowquakes are triggered in the porous structure of bonded crystals. The present dataset covers uniaxial compression experiments of snow at different strain rates and concurrent X-ray tomography imaging documenting this feature.

The experiments were conducted in a micro-compression stage operated in the X-ray tomography scanner in the SLF cold laboratory. The dataset comprises the compression force data of 17 compression experiments, the 3D image data from 4 X-ray tomography scans and the results of numerical simulations.

compression-experiments

display_name: compression-experiments

microstructure

display_name: microstructure

snow

display_name: snow

snow-mechanics

display_name: snow-mechanics

x-ray-tomography

display_name: x-ray-tomography

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Compressive stick slip and snow-micro-quakes


en: water-demand water-supply reservoirs climate-change water-scarcity

en: Reservoir volumes

en: Reservoir volume for the 307 medium-sized catchments for different storage categories: natural lakes, artificial reservoirs, reservoirs for artificial snow production, drinking water reservoirs, and usable volumes of natural lakes. Unit: Mio m³. One column per catchment (see shapefile).

en: Water demand version 2 (corrected version)

en: Water demand (deprecated)

en:
Warning: please use the corrected version 2, since this file contains errors for certain categories such as Livestock, Industry or Houshold.

Water demand estimates for the 307 medium-sized catchments for different categories for current and future conditions. One text file is provided per demand category. One column corresponds to one catchment (IDs compare to shapefile), The data are provided at monthly resolution in mm/d and can be converted to volumes by using the catchment area. E.g.
Q[mm/d] * catchment area [m²] /1000 = Q[m³/d]
or to obtain discharge in m³/s
Q[mm/d] * catchment area [m²]/1000/24/3600 = Q [m³/s].
Future irrigation and hydropower water demand are provided per climate model chain.

en: Shapefile of 307 catchments in Switzerland

en: Shapefile of 307 catchments for which estimates of water supply, demand, and reservoir volumes are provided. The OBJECTID entry corresponds to the catchment ID which is used as a reference in the other datasets provided.

en: Water supply

en: Simulated discharge series for a reference period 1981-2010 and till the end of the century. Data are provided for 39 climate model chains and a control run based on the observed meteorology. Data are provided at daily resolution (mm/d).

en:
The dataset Hydro-CH2018 reservoirs provides estimates of current and future water supply, water demand, and storage volumes for 307 medium-sized catchments in Switzerland.
Water supply for current (1981-2010) and future (2070-2099) climate conditions was simulated using the hydrological model PREVAH. For modeling current water supply, observed meteorological time series were used as input, while simulated meteorological time series derived from 39 model chains of the CH2018 initiative were used as an input for simulating future climate conditions.

Water demand was estimated for six categories:

- 1) Drinking water (households and tourism),
- 2) industry (second and third sector),
- 3) artificial snow production,
- 4) agriculture (irrigation and livestock feeding),
- 5) ecology (residual flows), and
- 6) hydropower.

Future estimates consider changes in demand related to population growth and changes in the hydrological conditions.
Storage volumes are provided for natural lakes (storage capacities and usable volumes), artificial reservoirs, reservoirs for artificial snow production, and drinking reservoirs.

A detailed description of the simulation and estimation procedures can be found in

*  Brunner, M.I., Björnsen Gurung, A., Zappa, M., Zekollari, H., Farinotti, D., Stähli, M., 2019. Present and future water scarcity in Switzerland: Potential for alleviation through reservoirs and lakes. Sci. Total Environ. 666, 1033–1047. https://doi.org/10.1016/j.scitotenv.2019.02.169.

This dataset contains the following information:

1.	Shapefile with the 307 medium-sized Swiss catchments.
2.   Textfiles with the water supply simulations for the control run and the 39 climate model chains (one file per chain) at daily resolution for the 307 catchments.
3.	Textfiles with the current and future demand estimates per category at monthly resolution for the 307 catchments.
4.	Textfiles with the storage volumes per category and catchment.

climate-change

display_name: climate-change

reservoirs

display_name: reservoirs

water-demand

display_name: water-demand

water-scarcity

display_name: water-scarcity

water-supply

display_name: water-supply

en: Hydro-CH2018 reservoirs