maintainer: Leonie Schönbeck

en: vpd drought fluorescence acclimation photosynthesis gas-exchange pinus-sylvestris

en: Instrument details

en:
Instrument details for all LiCor instruments used during collection of dataset.

Metatdata created following guidelines from
Ely et al (2021). A reporting format for leaf-level gas exchange data and metadata. Ecological Informatics. https://doi.org/10.1016/j.ecoinf.2021.101232

en: Methods ACi curves

en:
Parameters and methods for CO2 response curves of Photosynthesis.

Metatdata format by
Ely et al (2021). A reporting format for leaf-level gas exchange data and metadata. Ecological Informatics. https://doi.org/10.1016/j.ecoinf.2021.101232

en: Methods fluorescence

en:
Parameters and methodology for Fluorescence measurements

Metadata format from
Ely et al (2021). A reporting format for leaf-level gas exchange data and metadata. Ecological Informatics. https://doi.org/10.1016/j.ecoinf.2021.101232

en: Methods survey

en: Parameters and methods for point measurements / survey measurements

en: Methods diurnal measurements

en:
Parameters and methodology for diurnal measurements

Metadata format from
Ely et al (2021). A reporting format for leaf-level gas exchange data and metadata. Ecological Informatics. https://doi.org/10.1016/j.ecoinf.2021.101232

en: Methods light response

en: Methods and parameters for light response curves

en: Pfynwald gas exchange

en:
Full dataset of Pfynwald gas exchange data taken in the period from June 2013 to October 2020.
All metdata can be found in attached documents.
Data uploaded after quality control using guidelines by Ely et al (2021). A reporting format for leaf-level gas exchange data and metadata. Ecological Informatics. https://doi.org/10.1016/j.ecoinf.2021.101232

en: Variable names and units

en: Variable names, description and units for the Pfynwald Gas exchange data

en:
Gas exchange was measured on control, irrigated and irrigation-stop trees at the irrigation experiment Pfynwald, during the years 2013, 2014, 2016-2020. The measurement campaigns served different purposes, resulting in a large dataset containing survey data, CO2 response curves of photosynthesis, light response curves of photosynthesis, and fluorescence measurements. Measurements were done with LiCor 6400 and LiCor 6800 instruments. Until 2016, measurements were done on excised branches or branches lower in the canopy. From 2016 onwards, measurements were done in the top of the canopy using fixed installed scaffolds.
All metadata can be found in the attached documents.

acclimation

display_name: acclimation

drought

display_name: drought

fluorescence

display_name: fluorescence

gas-exchange

display_name: gas-exchange

photosynthesis

display_name: photosynthesis

pinus-sylvestris

display_name: pinus-sylvestris

vpd

display_name: vpd

en: 2013-2020 gas exchange at Pfynwald


data-broedlin-cnp

maintainer: EnviDat Support

title_for_slug: data-broedlin-cnp

en: mineralization drying-rewetting soil nitrogen dissolved-organic-matter stoichiometry phosphorus carbon forest

state: active

type: dataset

en: Data Broedlin-CNP-Release

en: Raw data of C-N-P mobilization experiment from Oi, Oe/Oa, and A horizons of beech forest soils along a nutrient availability gradient.

format: XLS

en: Data Broedlin-CNP

en: Mircocosm experiment to identify the individual patterns and controls of C, N, and P mobilization in soils under beech forests. Organic and mineral horizons sampled along a nutrient availability gradient in Germany were exposed to either permanent moist conditions or to dry spells in microcosms and quantified the release of inorganic and organic C, N, and P.

carbon

display_name: carbon

dissolved-organic-matter

display_name: dissolved-organic-matter

drying-rewetting

display_name: drying-rewetting

forest

display_name: forest

mineralization

display_name: mineralization

nitrogen

display_name: nitrogen

phosphorus

display_name: phosphorus

soil

display_name: soil

stoichiometry

display_name: stoichiometry

educ

fr: Éducation, culture et sport

de: Bildung, Kultur und Sport

en: Education, culture and sport

it: Istruzione, cultura e sport

envidat

fr: EnviDat: le portail de données environnementales

de: EnviDat: das Umwelt-Datenportal

en: EnviDat: the Environmental Data Portal

it: EnviDat: il portale dei dati ambientali

fr: EnviDat est le portail de données du WSL; il offre un accès uniformisé et réglementé aux données de surveillance et de recherche en matière d’environnement. Ce portail est capable d’héberger et de publier des ensembles de données précieuses et uniques, qui sont partagées aux quatre coins de la planète. Ce faisant, EnviDat favorise la recherche et contribue à l’avancement des sciences environnementales.

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

de: EnviDat ist das Datenportal der WSL für einen einheitlichen und verwalteten Zugang zu Umweltdaten aus Monitoring- und Forschungsprojekten. Auf dem Portal können Datensätze gehostet und veröffentlicht werden. Durch die weltweite Bereitstellung einzigartiger und wertvoller Datensätze leistet EnviDat einen Beitrag zur Forschung im Bereich der Umweltwissenschaften.

it: EnviDat è il portale dati del WSL che fornisce un accesso unificato e gestito ai dati di monitoraggio ambientale e di ricerca. Il portale ha la capacità di ospitare e pubblicare serie di dati preziosi e unici che vengono condivisi in tutto il mondo. Così facendo, EnviDat promuove la ricerca e contribuisce al progresso della scienza ambientale.

political_level: other

wsl

capacity: public

type: organization

approval_status: approved

key: guid

key: uri

value: Envidat Harvester

en: Data Broedlin CNP


maintainer: Paraskevi Georgakaki

en: ice-water-content wrf swiss-alps jungfraujoch liquid-water-content secondary-ice-production blowing-snow ice-crystal-number-concentration

en: WRF outputs

en:
The .zip file contains all the NetCDF outputs produced by the mesoscale Weather Research and Forecasting (WRF) model (version: 4.0.1). Two case studies were simulated in this study, between 25-28 January 2014 (00:00 UTC) and 29 January - 1 February 2014 (00:00 UTC), respectively. The former is denoted as "NW" and the latter as "SE", owing to the prevailing wind conditions at the Jungfraujoch (JFJ) station.

The outputs come from the innermost domain of the simulations with a spatial resolution of 1 km and are extracted from the nearest to JFJ model grid point (46.55°N 7.98°E). The dimensions of each model variable is [145,100], which corresponds to time and height, respectively. The frequency of the outputs is 30 min. Note that the first 24 hours of each simulation (i.e., the first 48 outputs) were considered spin up time.

The following sets of sensitivity simulations were presented in this study:

* CNTRL_NW.nc, CNTRL_SE.nc : Sensitivity simulations performed with the default version of WRF
* DS_PHILL_NW.nc, DS_PHILL_SE.nc : Sensitivity simulations including a description of the droplet shattering process following Phillips et al. (2018)
* DS_SULL_NW.nc, DS_SULL_SE.nc : Sensitivity simulations including a description of the droplet shattering process following Sullivan et al. (2018)
* PHILL_NW.nc, PHILL_SE.nc : Sensitivity simulations including a description of the ice-ice collisional break-up process following Phillips et al. (2017)
* TAKAH_NW.nc, TAKAH_SE.nc : Sensitivity simulations including a description of the ice-ice collisional break-up process following Sullivan et al. (2018) based on Takahashi et al. (1995)
* TAKAHrim_NW.nc, TAKAHrim_SE.nc : Same set-up as before but applied only to collisions between rimed ice particles
* BIPS_Xk0_DY_NW.nc, BIPS_Xk0_DY_SE.nc : Sensitivity simulations including a source of Xk0 (either 10.0 or 100.0 L⁻¹) ice crystals with sizes of DY (either 10 or 100 μm) in the first atmospheric level of the model
* BIPS100_PHILL_NW.nc, BIPS100_PHILL_SE.nc : Sensitivity simulations where the combined effect of blowing snow and ice-ice collisional break-up is examined

format: SERVICE

en: Observational data

en:
The .zip file contains 6 .csv files including all microphysical measurements taken at the Jungfraujoch station during the two periods of interest:

* 25-28 January 2014 : northwesterly-winds (NW)
* 29 January - 1 February 2014 : southeasterly-winds (SE)

The total Ice Crystal Number Concentration (ICNC; reported in L⁻¹) is measured by the two-dimensional stereo hydrometeor spectrometer (2D-S; Lawson et al., 2006) over the size range 10-1280 μm. The total ice water content (IWC; reported in gm⁻³) is also derived by the 2D-S data using the Brown and Francis (1995) mass-diameter relationship. Finally, the quantification of the liquid water content (LWC; reported in gm⁻³) is based on the liquid droplet size distribution data derived from a DMT cloud droplet probe (CDP; Lance et al., 2010) over the size range 2-50 μm. The frequency of the measurements in the .csv files is 30 min, to match the output frequency of the model. Datetime is also reported in the files (DD/MM/YYYY h:mm) in UTC.

Acknowledgment: Collection and pre-processing of the microphysical measurements has been performed by Gary Lloyd (gary.lloyd@manchester.ac.uk). More details about the instrumentation during the CLACE2014 campaign can be found in Lloyd et al. (2015).

en:
This repository contains all WRF model outputs and observational data sets used for the paper:
Georgakaki, P., Sotiropoulou, G., Vignon, É., Billault-Roux, A.-C., Berne, A., and Nenes, A.: Secondary ice production processes in wintertime alpine mixed-phase clouds, Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2021-760, in review, 2021.

blowing-snow

display_name: blowing-snow

ice-crystal-number-concentration

display_name: ice-crystal-number-concentration

ice-water-content

display_name: ice-water-content

jungfraujoch

display_name: jungfraujoch

liquid-water-content

display_name: liquid-water-content

secondary-ice-production

display_name: secondary-ice-production

swiss-alps

display_name: swiss-alps

wrf

display_name: wrf

en: Data for the publication "Secondary ice production processes in wintertime alpine mixed-phase clouds"


maintainer: Sven-Eric Hopf

en: fraxinus iap forest monitoring ash-dieback

en: Monitoring of ash trees as part of the Intercantonal Forest Observation Programme

en: Packgroun information on data for the publication: Spread and Severity of Ash Dieback in Switzerland – Tree Characteristics and Landscape Features Explain Varying Mortality Probability, (Klesse et al. 2021, Front. For. Glob. Change 4:645920., doi: 10.3389/ffgc.2021.645920)

en:
In 2013, the Institute for Applied Plant Biology (IAP) started a monitoring programme to study the development and the spatial variation of the ash dieback disease with the aim to find some partially resistant European ash trees (Fraxinus excelsior).
We collaborate as co-authors for the publication: Spread and Severity of Ash Dieback in Switzerland - Tree Characteristics and Landscape Features Explain Varying Mortality Probability (Klesse et al. 2021 in frontiers)

ash-dieback

display_name: ash-dieback

fraxinus

display_name: fraxinus

iap

display_name: iap

monitoring

display_name: monitoring


maintainer: James W. Kirchner

en: stable-water-isotopes catchment precipitation deuterium plynlimon chloride tracer streamflow

en: 7-hourly stable water istopes

media_type: text/plain

en: Data set of 7-hourly stable water isotope data measured at Carreg Wen (precipitation) and Upper Hafren (streamflow).

format: TXT

mimetype: text/plain

en: Weekly stable water isotopes

en: Data set of weekly stable water isotope data collected at Carreg Wen (precipitation) and Lower Hafren and Tanllwyth (streamflow).

en: Data Set Documentation

media_type: application/pdf

en: This file contains a documentation of the data sets, including references to other helpful documentations.

format: PDF

mimetype: application/pdf

en: The data base contains timeseries of stable water isotopes in precipitation and streamflow at Plynlimon, Wales, UK. One data set contains weekly stable water isotope data from the Lower Hafren and Tanllwyth catchments, and the other data set contains 7-hourly stable water isotope data from Upper Hafren. Both data sets also include chloride concentrations in precipitation and streamflow.

catchment

display_name: catchment

chloride

display_name: chloride

deuterium

display_name: deuterium

plynlimon

display_name: plynlimon

precipitation

display_name: precipitation

stable-water-isotopes

display_name: stable-water-isotopes

streamflow

display_name: streamflow

tracer

display_name: tracer

en: Stable water isotopes in precipitation and streamflow at Plynlimon, Wales, UK


en: snow compression-experiments snow-mechanics microstructure x-ray-tomography

en: Snowmicroquakes Data

en: Compression experiments, X-ray images and simulation data with supplemented README file

en: README

en: README file explaining the organization of the data

en:
When snow is compressed with a certain speed, micro-snowquakes are triggered in the porous structure of bonded crystals. The present dataset covers uniaxial compression experiments of snow at different strain rates and concurrent X-ray tomography imaging documenting this feature.

The experiments were conducted in a micro-compression stage operated in the X-ray tomography scanner in the SLF cold laboratory. The dataset comprises the compression force data of 17 compression experiments, the 3D image data from 4 X-ray tomography scans and the results of numerical simulations.

compression-experiments

display_name: compression-experiments

microstructure

display_name: microstructure

snow

display_name: snow

snow-mechanics

display_name: snow-mechanics

x-ray-tomography

display_name: x-ray-tomography

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Compressive stick slip and snow-micro-quakes


maintainer: Virginie Marques

en: plankton fjord marine environmental-dna dna-metabarcoding biodiversity fish

en: Metabarcoding data

media_type: application/zip

en: Raw metabarcoding data for both primers (teleo and 18S) and corresponding file to perform the demultiplexing and primer trimming

format: ZIP

en: Code, data and figures

en: Here there are all the data and code to reproduce the figures and analysis presented in the paper, with a README.md file

en:
This dataset contains the raw environmental DNA data associated with the publication *Environmental drivers of eukaryotic plankton and fish biodiversity in an Arctic fjord* in the journal Polar Biology (2023).

 Methods

**Sampling**
We sampled the Lilliehöök fjord on the west coast of Spitsbergen (Svalbard, Norway) over 3 days from 3 to 5 of August 2021. Samples were taken from the glacier front up to the fjord mouth of the Krossfjorden system, around 30 km long, after the Lilliehöök fjord merged with the mouth of Möller fjord. The fjord’s maximum depth has been recorded at 373 m (Svendsen et al. 2002) and has no sill at its entrance, thereby facilitating water exchange with the open ocean of the West Spitsbergen Current. We used a research vessel to sample 5 sites for a total of 15 samples, sampling 3 depths per site (3-m, chlorophyll a maximum and 85-m, unless sea floor was shallower). Shallow and intermediate samples between 3-m and 12-m represent ~35-L of water filtered in-situ using long tubing and a peristaltic pump, and all other deeper samples were taken from a total of 3 Niskin bottles (General Oceanics), representing 22-L of water sampled per sample. Water was filtered through a VigiDNA filtration capsule (SPYGEN) with a 0.20-µm pore size using an Athena peristaltic pump (Proactive Environmental Products, Bradenton, Florida) with a flow rate of ~1-L/min. Each sample was handled with single use tubing and gloves.

**Molecular**
To perform the amplification, we used two sets of primers: teleo (forward: ACACCGCCCGTCACTCT, reverse: CTTCCGGTACACTTACCATG; Valentini et al. 2016) and the universal eukaryotic 1389F/1510R primer pair, amplifying the V9-18S rDNA gene (Amaral-Zettler et al. 2009) (forward: TTGTACACACCGCCC, reverse: CCTTCYGCAGGTTCACCTAC).

 Data content:

+ Metabarcoding data: This zip file contains the 2 sequencing libraries filtered to only retain the samples used in the present study.
+ Code, data and figure: This zip file contains all data and code to reproduce the figures and the analysis in the study, with an associated README explaining the content of each folder.

 Additional informations
For more details, please see the Methods in the associated publication: DOI: 10.1007/s00300-023-03187-9.

biodiversity

display_name: biodiversity

dna-metabarcoding

display_name: dna-metabarcoding

environmental-dna

display_name: environmental-dna

fish

display_name: fish

fjord

display_name: fjord

marine

display_name: marine

plankton

display_name: plankton

en: Data: Environmental drivers of eukaryotic plankton and fish biodiversity in an Arctic fjord


maintainer: Michael Lehning

en: alpine-precipitation snow snow-cover snow-hydrology snow-distribution alpine3d-simulations alpine3d

en: ADS datasets and simulation inputs

en: The file contains the ADS datasets of snow depth and input data used for simulations.

mimetype: application/zip

en:
Dataset (Model input, snow distribution and validation) for the precipitation scaling paper, which should be cited along with the data set citation.

This data is useful for distributed hydrological modelling or other tasks that involve the study of snow distribution and precipitation in the high Alpine.

The format of the data is for Alpine3D (models.slf.ch) model runs but other models could be used, too.

Please cite:

_Vögeli, C., Lehning, M., Wever, N., Bavay M., 2016: Scaling Precipitation Input to Spatially Distributed Hydrological Models by Measured Snow Distribution., Front. Earth Sci. 4: 108. doi: 10.3389/feart.2016.00108._

Dataset is provided as a single zip file.
The archive contains two directories, the valuable distributed snow depth maps for the landscape Davos and the simulation input.
The archive also contains the file: "ReadMeMetadataDataSetPrecipitationScaling" which explains the data structure.

alpine-precipitation

display_name: alpine-precipitation

snow-cover

display_name: snow-cover

snow-distribution

display_name: snow-distribution

snow-hydrology

display_name: snow-hydrology

en: Precipitation Scaling Data Set (Vögeli et al., Frontiers)


en: snowmicropen water-front snow-temperature ice-layers weissfluhjoch snow-stratigraphy

en: WFJ_ICE_LAYERS dataset

en: README

en: The WFJ_ICE_LAYERS dataset contains multi-instrument snowpack measurements at high temporal resolution, which enable to monitor the formation of deep ice layers due to preferential water flow, at the Weissfluhjoch research site, Davos, Switzerland. It covers the winter 2016/2017, with a focus on the early melting season. This dataset includes traditional snowpack profiles (weekly resolution, 15/11/2016-29/05/2017), SnowMicroPen penetration resistance profiles (daily resolution, 01/02/2017-19/04/2017), snow temperatures measured at different heights in the snowpack (half-hourly resolution, 01/03/2017-15/04/2017) and the water front height derived from an upward-looking ground penetrating radar (3-hour resolution, 04/03/2017-08/04/2017). The measurements are complemented by initialization files for SNOWPACK model simulations with the ice reservoir parameterization at Weissfluhjoch for the winter 2016/2017.

ice-layers

display_name: ice-layers

snow-stratigraphy

display_name: snow-stratigraphy

snow-temperature

display_name: snow-temperature

snowmicropen

display_name: snowmicropen

water-front

display_name: water-front

weissfluhjoch

display_name: weissfluhjoch

en: WFJ_ICE_LAYERS: Multi-instrument data for monitoring deep ice layer formation in an alpine snowpack


en: List of authors and list of the editorial board of the European Snow Booklet

en:
Here you can find the list of all lead authors of the different chapters of the European Snow Booklet (ESB).
In addition a list of the editorial board that reviewed the ESB is given.

en: European Snow Booklet unpublished metadata

en: The entire station metadata of all European institutions that contributed data is stored in METADATA_unpublished.xlsx. This file, however, cannot be accessed, since not all institutions gave permission to publish their station metadata. If you wish to access the metadata, please send a request to marty@slf.ch stating clearly why you want to access these metadata. NOTE: in this file ONLY station metadata (Lat/Lon/Altitude) is given, NO measured snow depth data.

en: COST European Snow Booklet (ESB)

en: Please find here the web version of the COST European Snow Booklet (ESB).

en: European Snow Booklet public metadata

en:
The core of the European Snow Booklet (ESB), the country reports of 38 European countries, are based on information and metadata on snow measurements collected through a comprehensive survey, the ESB Questionnaire, between August 2017 and March 2018. The station metadata (for example location, elevation, measurement start date) from each country was provided by one or several institutions responsible for snow observations. By answering the questionnaire the contacts agreed that the information and metadata provided could be presented in the ESB. For cases where institutions indicated that information on station locations could be made publicly available, the metadata for the variables snow depth (HS), depth of snowfall (HN) and water equivalent of the snow cover (SWE), is additionally provided here for download (METADATA.xlsx).
Please note that not all institutions gave permission to publish their station metadata. This metadata has to be requested from the non-personal institution contacts provided in the METADATA.xlsx file. In some cases, however, no institutional contact is available and thus the contact of the country representative who filled in the questionnaire is used.
For current, updated station metadata we refer to the (non-personal) institutional contacts provided in METADATA.xlsx and/or the institution webpages. Note, however, that we cannot guarantee for completeness of the dataset for all countries because operational networks are prone to changes.

en: COST European Snow Booklet (ESB) - DORA Link

media_type: text/html

en: DORA Link of the COST European Snow Booklet (ESB).

format: HTML

en:
The European Snow Booklet (ESB) is a book of reference for snow measurements that has been produced through collaboration with many European snow practitioners and snow scientists in the framework of the European Cooperation in Science and Technology (COST) Action ES1404 “A European network for a harmonised monitoring of snow for the benefit of climate change scenarios, hydrology and numerical weather prediction (HarmoSnow)”. The ESB provides a unique collection of information about operational snow observations in the European countries and the methods used to perform basic measurements of snow on the ground: snow depth (HS), depth of snowfall (HN), water equivalent of the snow cover (SWE) and presence of snow on the ground (PSG). Information and station metadata (for example location, elevation) for these basic snow variables were collected through a comprehensive survey, the ESB questionnaire between August 2017 and March 2018. Numerous institutions of 38 European countries provided detailed information describing the status of the operational snow observations and the methods used at the time of the survey. Based on the information provided, a country report was written for each European country. Similarities and differences among the countries, that is, the choice of snow variables to be measured, the measurement principles applied, the number of stations, or the spatial and elevational station distribution are pointed out. Thus the collection of country reports demonstrates the relevance of snow measurements for each country. Thus, the intention of the ESB is to foster better knowledge transfer regarding snow measurements between the snow science and operational communities and to improve the communication of information to the general public.

For detailed information on the European countries, we refer to the ESB, which can be downloaded here (envidat.ch). Please note that the ESB is not a living document and information and station metadata are from August 2017 till March 2018, except for Latvia (metadata updated in December 2018).

depth-of-snowfall

display_name: depth-of-snowfall

harmonisation-of-snow-measurements

display_name: harmonisation-of-snow-measurements

snow-depth

display_name: snow-depth

snow-measurement-methods

display_name: snow-measurement-methods

water-equivalent-of-the-snow-cover

display_name: water-equivalent-of-the-snow-cover

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: European Snow Booklet – an Inventory of Snow Measurements in Europe


maintainer: Vanessa Burg

en: bioenergy manure switzerland review biogas

en: Biogas from animal manure in Switzerland: energy potential, technology development and resource mobilization

en: Aim of this white paper is to provide decision-makers, administrations and stakeholders with the most current research findings in order to promote the optimal use of bioenergy from manure in the Swiss energy transition. For this purpose, the results of the Swiss competence center for bioenergy research - SCCER BIOSWEET - are summarized and presented in a broader context. If nothing else is mentioned, the results refer to Switzerland and in case of the feedstock to the domestic biomass potentials.

bioenergy

display_name: bioenergy

biogas

display_name: biogas

manure

display_name: manure

review

display_name: review

switzerland

display_name: switzerland


maintainer: Mahdi Jafari

en: snow-density-profile numerical-simulation openfoam vapor-transport convection-in-snow

en: snowpackBuoyantPimpleFoam

en:
This zipped folder includes (1) the source code files, (2) an example case for simulation, and (3) an instruction how to compile and use the new solver.

Note that the most updated version of snowpackBuoyantPimpleFoam can be found in the WSL/SLF GitLab repository: https://gitlabext.wsl.ch/snow-models/snowpackbuoyantpimplefoam

en: snowpackBuoyantPimpleFoam is a two-phase solver implemented to model convection of water vapor with phase change in snowpacks. This new solver is based on the standard solver of buoyantPimpleFoam in the open-source fluid dynamics software, OpenFOAM 5.0 (www.openfoam.org).

convection-in-snow

display_name: convection-in-snow

numerical-simulation

display_name: numerical-simulation

openfoam

display_name: openfoam

snow-density-profile

display_name: snow-density-profile

vapor-transport

display_name: vapor-transport

en: snowpackBuoyantPimpleFoam: an OpenFOAM Eulerian–Eulerian two-phase solver for modelling convection of water vapor in snowpacks


swiss-fluxnet-site-davos

title_for_slug: swiss-fluxnet-site-davos

en: meteorological-measurements swiss-fluxnet swiss-forest-lab greenhouse-gas flux eddy-covariance forest icos

en: Fluxnet2015 dataset

en: Processed flux and meteo data are also part of the Fluxnet2015 dataset.

en: Data access

en: The flux and meteo data of the Swiss FluxNet site Davos are openly available. Near real-time flux and meteo data are uploaded daily to the ICOS Carbon Portal.

en: Site description

en: Processed data

en: Processed flux and meteo data are available from the European Fluxes Database Cluster.

en:
The Swiss FluxNet Site Davos is a managed subalpine evergreen forest, located on the Seehorn mountain near Davos in the Swiss Alps. The site is dominated by Norway spruce. The tower is owned by the Federal Office for the Environment (FOEN).
Ecosystem flux measurements of CO2, H2O (since 1997) as well as CH4 and N2O (since 2016) are performed with the eddy covariance method.
In addition to Swiss FluxNet, the site is part of the National Air Pollution Monitoring Network (NABEL), the Long term Forest Ecosystem Research (LWF), the biological drought and growth indicator network (TreeNet) and of ICOS Switzerland (Integrated Carbon Observation System). Since November 2019, the site is an ICOS Class 1 Ecosystem station.

Measurements

- Ecosystem flux measurements of CO2, H2O vapour (since 1997) as well a CH4 and N2O (since 2016) are performed with the eddy-covariance method. This method is based on measurements of trace gas mixing ratios, using infrared gas analyzers (for CO2, H2O vapor) and laser spectrometers (for CH4 and N2O), combined with wind speed and wind direction measurements, using 3D sonic anemometers. To resolve the short-term turbulent fluctuations in the atmosphere, very fast measurements are needed: we measure at 10-20 Hz, i.e., 10-20 times per second. To assess the energy budget of each ecosystem, also radiation sensors and soil climate profiles are installed at the site.
- Sub-canopy eddy fluxes (CO2, H2O, since 2023 also CH4).
- Continuous profile concentration and forest floor flux measurement of CO2, H2O, CH4, N2O.
- Auxiliary micrometeorology and soil climate measurements.

Data availability

Near real-time flux and meteo data uploaded daily to the ICOS Carbon Portal. Processed flux and meteo data are also available from the European Fluxes Database Cluster and part of Fluxnet2015 dataset.

Data policy

ICOS data license:
[https://www.icos-cp.eu/data-services/about-data-portal/data-license](https://www.icos-cp.eu/data-services/about-data-portal/data-license)

Detailed site info:
[https://www.swissfluxnet.ethz.ch/index.php/sites/ch-dav-davos/site-info-ch-dav/](https://www.swissfluxnet.ethz.ch/index.php/sites/ch-dav-davos/site-info-ch-dav/)

eddy-covariance

display_name: eddy-covariance

flux

display_name: flux

forest

display_name: forest

greenhouse-gas

display_name: greenhouse-gas

icos

display_name: icos

meteorological-measurements

display_name: meteorological-measurements

swiss-fluxnet

display_name: swiss-fluxnet

swiss-forest-lab

display_name: swiss-forest-lab

en: Swiss FluxNet Site Davos


maintainer: Anita C. Risch

en: non-native-plant grassland herbivory weed-management native-plant

en: Correction: Data file native and non-native plant interactions in Australian grasslands

en:
taxa tab:	list and overview of all the recorded species

* family:                 family of the plant

* genus:                genus of the plant

* species:                plant species name

* origin:                indicates whether the plant is native to Australia or not (non-native)

* common name:	        common name of the plant species

* functional group:	        functional group of the plant species: forb, graminoid, fern, tree

* functional group detailed:	gives more detail about the type of graminoid and forb: legume, forb (non-leguminous),
                        grass, sedge, rush, fern, tree

* lifeform:                annual or perennial lifeform (species which can have both of these lifeforms where
                        considered as annuals)

plot tab:	list of species found in each plot and their cover (%)

* sampling.session:        provides information about the sampling time:
                        May2020 = data that was collected in May 2020
                        Nov2020 = data that was collected in November 2020

* farm.name:	            name of the farms where the sampling took place:
                        SF = farm of the Southern group
                        NF = farm of the Northern group
                        numbers 1-3 = randomly allocated to the Southern group of farms
                        numbers 4-6 = randomly allocated to the Northern group of farms

* site.type:	                KG: Kangaroo grass dominated site
                        ALG: ALG+KG site (Kangarooo grass and African lovegrass co-dominated site)

* plot.no:                plot number: 9-12

* scientific.name:	        scientific name of the plant species found in a certain plot

* functional group:	        indicates whether the species found is a tree, forb, graminoid or fern

* functional group detailed:	indicates whether the species found is a tree, legume, forb (non-leguminous),
                        grass, sedge, rush, fern

* lifeform:                specifies the lifeform of the species: annual or perennial lifeform
                        (species which can have both of these lifeforms where considered as annuals)

corrections tab:	Detailed description of corrections made in plot.data tab

en:
This dataset contains all data, on which the following publication below is based.

Paper Citation:

_Schlierenzauer, C., Risch, A.C., Schütz, M., Firn, J. 2021. Non-native Eragrostis curvula reduces plant species diversity in pastures of South-eastern Australia even when native Themeda triandra remains co-dominant. Plants 10, 596._

Please cite this paper together with the citation for the datafile.

Study area
The study was conducted in the lowland grassy woodlands of the Bega Valley Region, which is located in the south-east corner of New South Wales, Australia. Embedded between the Pacific Ocean and the Australian Alps, the lowland grassy woodlands are mostly located on granitic substrates and reach elevations of roughly 500 m above sea level. Typically, these grassy woodlands receive less precipitation (mean annual precipitation between 700-1100 mm) compared to the more elevated areas that surround them (NSW Government - Office of Environment and Heritage 2017).
The vegetation is dominated by an open tree canopy layer consisting of Eucalyptus tereticornis Sm, Angophora floribunda Sm. (Sweet) and a range of other eucalypt species. Sometimes shrub or small trees are also present, whereas grasses and forbs form the ground-cover. In areas without intensive agricultural history, this layer is dominated by perennial, tussock grasses such as Themeda triandra Forssk, Microlaena stipoides R.Br (Weeping Grass), Eragrostis leptostachya Steud. (Paddock Lovegrass) and Echinopogon ovatus P.Beauv (Forest Hedgehog Grass). The remaining inter-tussock spaces are occupied by a diversity of growth-restricted grasses and herbaceous forbs (NSW - Department of Planing, Industries and Environment 2019; NSW Government - Office of Environment and Heritage 2017).
Clearing, pasture sowing, fertilizer application and livestock grazing resulted in a dramatic decrease in the extent of these natural woodlands, with less than five percent within conservation reserves and overall, with only about 20% of their original extent in New South Wales still existing (Tozer et al. 2010). The remaining areas outside of reserves are threatened by altered fire frequencies, habitat clearing, livestock grazing and especially by non-native plant invasion, particularly Eragrostis curvula (Schrad.) Nees. For this reason, the grassy woodlands are listed as an endangered ecological community in the NSW state legislation. Additionally, they are considered as critically endangered by the Commonwealth of Australia (Threatened Species Scientific Committee (TSSC) 2013).

Experimental design and sampling
The study was conducted on six farms and in each of them two sites were chosen, representing a paired design. One of the sites at each farm is dominated by native Themeda triandra, the other one co-dominated by non-native Eragrostis curvula and Themeda triandra. All farms are within a radius of approximately 10 km from the town Candelo. Three of the farms are located North (36°40’ to 36°42’ S and 149°38’ to 149°42’ E) and three of them are located South (36°51’ to 36°49’ S and 149°38’ to 149°42’ E) of Candelo.
Non-native herbivores (mainly cattle, sheep and rabbits) and native herbivorous marsupials (mainly kangaroos, wallabies and wombats) are present in the area of these sites. On each site, data was collected within four plots (each 1 x 1 m) in May and November 2020. All plant species found within a plot were recorded and their relative abundance was estimated.

References
NSW - Department of Planing, Industries and Environment. 2019. “Lowland Grassy Woodland in the South East Corner Bioregion - Endangered Ecological Community Listing.” https://www.environment.nsw.gov.au/topics/animals-and-plants/threatened-species/nsw-threatened-species-scientific-committee/determinations/final-determinations/2004-2007/lowland-grassy-woodland-south-east-corner-bioregion-endangered-ecological-community-l (February 18, 2021).
NSW Government - Office of Environment and Heritage. 2017. “Lowland Grassy Woodland in the South East Corner Bioregion - Profile.” https://www.environment.nsw.gov.au/threatenedSpeciesApp/profile.aspx?id=20070 (January 31, 2021).
Threatened Species Scientific Committee (TSSC). 2013. Environment Protection and Biodiversity Conservation Act 1999 (EPBC Act) Conservation Advice for Lowland Grassy Woodland in the South East Corner Bioregion. http://www.environment.gov.au/biodiversity/threatened/communities/pubs/82-conservation-advice.pdf.
Tozer, Mark et al. 2010. “Native Vegetation of Southeast NSW: A Revised Classification and Map for the Coast and Eastern Tablelands.” Cunninghamia : a journal of plant ecology for eastern Australia 11(3): 359–406.

grassland

display_name: grassland

herbivory

display_name: herbivory

native-plant

display_name: native-plant

non-native-plant

display_name: non-native-plant

weed-management

display_name: weed-management

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Native and no-native plant interactions in Australian grasslands


en: model-validation-data snow-depth snow-water-equivalent snow-density model-calibration-data

en: swe2hs calibration and validation data

en:
 Contents of this archive

 README.md

 A readme file containing a description of the other files.

 automatic_stations_validation_data.csv

 Daily data from the automatic weather stations used for validation.

 Data sources and providers are listed in the SWE2HS paper, Table 1.

 Columns:

  * date: timestamp of the format YYYY-MM-DD
  * HS_[m]: snow depth in [m]
  * SWE_[m]: snow water equivalent in [m]
  * site_id: code for the measurement site
  - HS_interpolated: boolean flag for interpolated values
  - SWE_interpolated: : boolean flag for interpolated values

 coordinates_swe2hs_paper_stations.csv

 Coordinates of all measurement sites used in the SWE2HS paper.

 Columns:

  * site_id: code for the measurement site
  * location_name: location name of the measurement site
  * lon_[wgs84]: longitude in WGS84
  * lat_[wgs84]: latitude in WGS84
  * elevation_[m]: atitude of the measurement site in [m]
  * dataset: dataset in which the station is included

 manual_station_calibration_data.csv

 Calibration data from the Swiss manual observer stations. Long station records
 trmmed to 15 random water-years.

 Columns:

  * date: timestamp of the format YYYY-MM-DD
  * HS_[m]: snow depth in [m]
  * SWE_[m]: snow water equivalent in [m]
  * SWE_from_profile_[m]: biweekly measurement from the SWE in the measurement
   pit. Corrected with the bulk density in order to match the snow depth from
   the measurement stake. Please refer to the paper for further details.
  * site_id: code for the measurement site

 manual_stations_validation_data.csv

 Validation data from the Swiss manual observer stations. Remaining water-years
 from the long sttaion record not used for the calibration data.

 Columns:

  * date: timestamp of the format YYYY-MM-DD
  * HS_[m]: snow depth in [m]
  * SWE_[m]: snow water equivalent in [m]
  * SWE_from_profile_[m]: biweekly measurement from the SWE in the measurement
   pit. Corrected with the bulk density in order to match the snow depth from
   the measurement stake. Please refer to the paper for further details.
  * site_id: code for the measurement site

 manual_stations_used_deltasnow_parameters.csv

 Site specific DeltaSNOW model parameters used for the calculation of the daily
 SWE series in 'manual_stations_calibration_data.csv' and
 'manual_stations_validation_data.csv'.

 Parameters were optimized by reducing RMSE to the biweekly snow pit SWE measurements.
 Please refer to the paper for further details.

 A python implementation of the DeltaSNOW model was used for the calculation:
 pydeltasnow (https://pypi.org/project/pydeltasnow/)

 For a detailed description of the DeltaSNOW model parameters please see the
 respective publication:

 Winkler, M., Schellander, H., & Gruber, S. (2021). Snow water equivalents
 exclusively from snow depths and their temporal changes: the Δ snow model.
 Hydrology and Earth System Sciences, 25(3), 1165-1187.

 Columns:

  * site_id: code for the measurement site
  * rho_max: Maximum density of an individual snow layer produced by the DeltaSNOW model in [kg/m3]
  * rho_null: Fresh snow density for a newly created layer [kg/m3
  * c_ov: Overburden factor due to fresh snow [-]
  * k_ov: Defines the impact of the individual layer density on the compaction due to overburden [-]
  * k: Exponent of the exponential-law compaction [m3/kg]
  * tau: Uncertainty bound [m]
  * eta_null: Effective compactive viscosity of snow for “zero-density” [Pa s]

en:
The data in this repository was used for the calibration and validation of the
SWE2HS model in the following publication:
Aschauer, J., Michel, A., Jonas, T., & Marty, C. (2023). An empirical model to calculate snow depth from daily snow water equivalent: SWE2HS 1.0. Geoscientific Model Development Discussions, 1-19. https://doi.org/10.5194/gmd-2022-258
Contains daily snow water equivalent and snow depth timeseries from stations in the European Alps.

model-calibration-data

display_name: model-calibration-data

model-validation-data

display_name: model-validation-data

snow-density

display_name: snow-density

snow-depth

display_name: snow-depth

snow-water-equivalent

display_name: snow-water-equivalent

en: SWE2HS model calibration and validation data


en: incoming longwave-radiation davos outgoing shortwave-radiation

en: Processing doc

en: Metadata

en: DATA ACCESS

en: Parameter file

en:
Incoming and outgoing shortwave and longwave 2 min radiation measurements in Davos Dorf, CH.

 References
1. Marty, C., Philipona, R., Frohlich, C., Ohmura, A.. Altitude dependence of surface radiation fluxes and cloud forcing in the alps: results from the alpine surface radiation budget network. 2002. Theoretical and Applied Climatology. Volume 72. Issue 3-4. 137-155. http://dx.doi.org/10.1007/s007040200019. 10.1007/s007040200019.
2. Christoph Marty. Surface Radiation, Cloud Forcing and Greenhouse Effect in the Alps. 2000. Institute fuer Klimaforschung ETH. Zuercher Klima-Schriften. Volume 79. http://e-collection.library.ethz.ch/eserv/eth:23491/eth-23491-01.pdf.

davos

display_name: davos

incoming

display_name: incoming

longwave-radiation

display_name: longwave-radiation

outgoing

display_name: outgoing

shortwave-radiation

display_name: shortwave-radiation

en: ASRB_DAV: Shortwave and longwave radiation measurements (2 min) in Davos Dorf


en: phylogenetic-diversity species-distribution-models european-alps conservation land-use-change functional-diversity migclim plants taxonomic-diversity global-change beta-diversity zonation

en: Data Access

format: GeoTIFF

en:
This repository contains extensive data for the European Alps:
  - Observations of ~3,500 plant species
  - Climate (1-km), soil (100-m) and land cover predictors (1km); current and future scenarios (28 CMIP6-GCMs, 2 land cover change and 3 dispersal scenarios i.e., unlimited, no and realistic vegetation dispersal)
  - Flora migration rates (categorical) and ecological preferences (continuous indicator values)
  - Regional maps of barriers to migration and water bodies at 100-m resolution
  - Sampling effort, distance to roads and cities predictors at 100-m resolution
  - Present and future abundances over the study region at 1-km resolution (~2,000 species)
  - Present and future multifaceted and uniqueness of the European Alps' Flora at 1-km resolution
  - Present and future conservation recommendations at 1-km resolution (26 current and future strategies)
  - Phylogenetic data and functional traits of ~2,000 plants (raw data and classification trees)
  - All scripts, data and plots used for the analyses, including a singularity container (mini-linux) to run them

beta-diversity

display_name: beta-diversity

conservation

display_name: conservation

european-alps

display_name: european-alps

functional-diversity

display_name: functional-diversity

global-change

display_name: global-change

land-use-change

display_name: land-use-change

migclim

display_name: migclim

phylogenetic-diversity

display_name: phylogenetic-diversity

plants

display_name: plants

species-distribution-models

display_name: species-distribution-models

taxonomic-diversity

display_name: taxonomic-diversity

zonation

display_name: zonation

en: Present and future multifaceted plant diversity, uniqueness and conservation in the European Alps


restoring-grassland-multifunctionality

title_for_slug: restoring-grassland-multifunctionality

en: grassland plants mineralization bacteria soil-biodiversity biodiversity ecosystem-multifunctionality restoration fungi nematodes

en: Please note that C.sto and Corg have been corrected.

en: Functional diversity above_belowground fauna

en: Please note that EMF, MF.below, MF.abio and Soil.hetero have been corrected.

en:
Please cite this paper together with the citation for the datafile.

Resch, M. C., Schütz, M., Buchmann, N., Frey, B., Graf, U., van der Putten, W. H., Zimmermann, S., Risch, A. C. 2021. Evaluating long-term success in grassland restoration – an ecosystem multifunctionality approach. Ecological Applications 31, e02271.

 Study area

The study was conducted in the Canton of Zurich, Switzerland, in and around two nature reserves Eigental and Altläufe der Glatt (47°27’ to 47°29’ N, 8°37’ to 8°32’ E, 417 to 572 m a.s.l.). All studied grasslands were located with a radius of approximately 4 km. Average monthly temperatures range from 0.7 ± 2.0 °C (January) to 19.0 ± 1.5 °C (July), and monthly precipitation range from 60 ± 42 mm (January) to 118 ± 46 mm (July [maxima]; 1989-2017; MeteoSchweiz 2018). In our study, we focused on semi-dry and semi-wet oligo- to mesotrophic grasslands characterized by high plant species richness and groundwater fluctuations throughout the year (Delarze et al. 2015, see also Resch et al. 2019).

 Experimental design and sampling

A large-scale restoration experiment to expand and reconnect isolated remnants of species-rich grasslands was initiated in the nature reserve Eigental in 1990. Twenty hectares of adjacent intensive grasslands were chosen for restoration. In 1995, three restoration methods of increasing intervention intensities were implemented. The goal of all three methods was to lower the availability of soil nutrients and hence, facilitate ecosystem development towards the targeted nutrient-poor grasslands. These methods were: Harvest only (hay harvest twice a year), Topsoil (removal of the nutrient-rich topsoil), and Topsoil+Propagules (topsoil removal combined with the application of hay from target vegetation). Plant biomass harvest (once a year in late summer/early autumn) commenced in Topsoil and Topsoil+Propagules five years after the soils were removed and is still ongoing today. We measured restoration success by comparing the three restoration methods with intensively managed (Initial) and semi-natural grasslands (Target) 22 years after restoration. Initial grassland sites share the same agricultural history as the restored sites: mowing and subsequent fertilizing (manure) up to five times a year, as well as different tillage regimes (Resch et al. 2019). Target sites were the sites from which hay for seeding the Topsoil+Propagules sites was collected. Soil conditions (i.e., soil types, soil texture) were comparable to those found in the restored grasslands (Resch et al. 2019). Additionally, Target sites were selected to represent a variety of semi-natural grasslands, including semi-dry to semi-wet conditions. In Target grasslands, biomass is harvested once a year in late summer or early autumn. Eleven 5 m x 5 m (25 m2) plots were randomly established in each of the five treatments (in total 55 plots; for a detailed map see Neff et al. 2020). An additional 2 m x 2 m (4 m2) subplot was randomly established at least 2 m away from each 25 m2 plot for destructive sampling. Data sampling took place between June and September 2017.

Vegetation properties

All plant species were identified within the 25 m2 plots (nomenclature: Lauber and Wagner 1996) in mid-June 2017 (in total 250 species). Vegetation structure and plant biomass were assessed diagonally on a transect of 2 m x 10 cm within the 25 m2 plot in early July 2017. We measured the maximum and mean height of the vegetation at the start, middle and end of the transect and calculated the standard deviation of these measures to describe vegetation structural heterogeneity (Schuldt et al. 2019). Thereafter, biomass was clipped on the entire transect to 1 cm height, sorted into five functional groups (graminoids, forbs, legumes, litter, and woody species), dried at 60 °C for 48 h, and weighed (Meyer et al. 2015).

 Aboveground arthropods

Aboveground arthropods were sampled at two locations in each 25 m2 plot in early July 2017 (see also Neff et al. 2020). Briefly, two cylindrical baskets (50 cm diameter, 67 cm height; woven fabric) were thrown simultaneously from outside the plot into two opposite corners. A closable mosquito mesh sleeve was mounted to the top of the baskets and an integrated metal ring at the bottom was fixed to the ground with metal stakes to assure that insects could not escape. A suction sampler (Vortis, Burkhard Manufacturing Co. Ltd., Hertfordshire, England) was then inserted into one of the baskets through the opening of the sleeve and the plot was “vacuumed" twice for 105 seconds with a 30 seconds break. The collected animals were immediately transferred into 70% ethanol. Arthropods were sorted and assigned to 23 taxonomic groups. Holometabolic larvae were lumped into one category while hemimetabolic larvae were grouped separately from adults in the respective taxonomic rank. We used mean values of individuals per plot for total abundance. Aboveground arthropod richness was defined by the number of different taxa to lowest taxonomic level (in total 23 taxa). All taxa were assigned to one of five trophic levels: 1) primary producers, 2) primary consumers, 3) secondary consumers, 4) tertiary consumers, and 5) quaternary consumers.

 Belowground fauna

Sampling of all belowground fauna took place in mid-July 2017. Earthworms were sampled in two 30 cm x 30 cm x 20 cm soil monoliths at two opposite corners of the 25 m2 plot (opposite to aboveground arthropod sampling). The excavated soil monolith was broken by hand, all earthworms collected and immediately transferred in a 4% formaldehyde solution. Thereafter, earthworm individuals were identified to species level (in total 10 taxa; Christian and Zicsi 1999) and species assigned to three functional groups (Bouché 1977).
To assess soil arthropod communities, we randomly collected one undisturbed soil core (5 cm diameter, 12 cm depth) in each 4 m2 subplot with a slide hammer corer lined with a plastic sleeve (AMS Samplers, American Falls, Idaho, USA). Soil arthropods were extracted using Berlese-Tullgren funnels (3 mm mesh), starting the day of sampling and lasting 14 days. Individuals were stored in 70% ethanol. Soil arthropods were assigned to 41 taxonomic groups and 4 feeding types. Holometabolic and hemimetabolic larvae were treated as previously described for aboveground arthropods. Belowground arthropod richness refers to the 41 taxonomic groups.

For soil nematode sampling, we randomly collected eight soil cores of 2.2 cm diameter (Giddings Machine Company, Windsor, CO, USA) within each 4 m2 subplot to a depth of 12 cm. The eight cores were combined, gently homogenized, placed in coolers, kept at 4 °C and transported to the laboratory at NIOO in Wageningen (NL) within one week after collection. Free-living nematodes were extracted from 200 g of fresh soil using Oostenbrink elutriator (Oostenbrink 1960) and prepared for morphological identification and quantification as described by Resch et al. (2019). Nematodes were identified to family level (39 taxa) according to Bongers (1988), assigned to 17 functional groups, 5 feeding types and 5 colonizer-persister (C-P) classes (Yeates et al. 1993, Bongers 1990, Resch et al. 2019).

We randomly collected two more soil cores (2.2 cm diameter x 12 cm depth) within each 4 m2 subplot to determine soil microbial communities. Again, the soil cores were combined, homogenized, placed in coolers and transported to the laboratory at WSL in Birmensdorf (Switzerland) where the metagenomic DNA was extracted from 8 g sieved soil (2 mm) using the DNeasy PowerMax Soil Kit (Quiagen, Hilden, NRW, GER) according to the manufacturer`s instructions. PCR amplification of the V3-V4 region of the prokaryotic small-subunit (16S) and the ribosomal internal transcribed spacer region (ITS2) of eukaryotes was performed with 1 ng of template DNA utilizing PCR primers and conditions as previously described (Frey et al., 2016). PCRs were run in triplicates and pooled. The pooled amplicons were sent to the Genome Quebec Innovation Centre (Montreal, QC, Canada) for barcoding using the Fluidigm Access Array technology (Fluidigm) and paired-end sequencing on the Illumina MiSeq v3 platform (Illumina Inc., San Diego, CA, USA). Quality filtering, clustering into operational taxonomic units (OTUs) and taxonomic assignment were performed as described by Frey et al. (2016) and Adamczyk et al. (2019). We used a customised pipeline largely based on UPARSE (Edgar 2013) implemented in USEARCH v. 9.2 (Edgar 2010). After discarding singletons of dereplicated sequences, clustering into OTUs with 97% sequence similarity was performed (Edgar 2013). Quality-filtered reads were mapped on the filtered set of centroid sequences. Taxonomic classification of prokaryotic and fungal sequences was conducted querying against most recent versions of SILVA (v.132, Quast et al. 2013) and UNITE (v.8, Nilsson et al. 2018). Only taxonomic assignments with confidence rankings equal or higher than 0.8 were accepted (assignments below 0.8 set to unclassified). Prokaryotic OTUs assigned to mitochondria or chloroplasts as well as eukaryotic OTUs assigned other than fungi were removed prior to data analysis. In addition, prokaryotic and fungal datasets were filtered to discard singletons and doubletons. Thereafter, OTU abundance matrices were rarefied to the lowest number of sequences per community, to normalize the total number of reads and achieve parity between samples (Prokaryota: 29,843 reads; Fungi: 26,690 reads). Finally, prokaryotic and fungal observed richness (number of OTUs) were estimated (Prokaryota: 14,010 OTUs; Fungi: 5,813 OTUs). For prokaryotes, we distinguished five and for fungi six functional types based on lowest taxonomic resolution (Nguyen et al. 2016, Tedersoo et al. 2014). Belowground taxon richness was defined by the total number of earthworm, arthropod, nematode, fungi, and prokaryote taxa assigned to lowest taxonomic level. Finally, all belowground taxa were assigned to the same five trophic levels as the aboveground arthropods.

 Soil chemical and physical properties, soil nitrogen mineralization

We randomly collected three 5 cm diameter x 12 cm depth soil samples in each 4 m2 subplot with a slide hammer corer (AMS Samplers, American Falls, Idaho, USA), pooled them and then made two subsamples. One was field-fresh and stored at 3 °C until analysis, the other was dried for 48 h at 60 °C and passed through a 4 mm mesh. From the dried sample, we measured soil pH potentiometrically in 0.01 M CaCl2 (soil:solution ratio=1:2; 30 minutes equilibration time). Total and organic carbon content were measured on fine-ground samples (≤ 0.5 mm) by dry combustion using a CN analyzer NC 2500 (CE Instruments, Wigan, United Kingdom). Inorganic carbon of samples with a pH > 6.5 was removed with acid vapor prior to analysis of organic carbon (Walthert et al. 2010). We calculated total soil carbon (C) storage after correcting its content for soil depth, stone content and density of fine earth (see below). Exchangeable cations were determined on another 5 g dry soil sample with 50 mL unbuffered 1 M NH4Cl solution (soil:solution ratio=1:10, end-over-end shaker for 1.5 hours) and measured by an ICP-OES (Optima 7300 DV, Perkin-Elmer, Waltham, Massachusetts, USA). Thereafter, cation exchange capacity (CEC) was calculated as the sum of exchangeable cations and protons (and expressed as mmolc per 1 kg soil) and used to describe nutrient retention capacity in our plots. Concentrations of exchangeable protons were calculated as the difference between total and Al-induced exchangeable acidity as determined by the KCl-method (Thomas 1982).

Ammonium (NH4+) and nitrate (NO3−) were extracted from a 20 g fresh subsample with 80 mL 1M KCl for 1.5 hours on an end-over-end shaker and filtered through ashless folded filter paper (DF 5895 150, ALBET LabScience, Hahnemühle FineArt GmbH, Dassel, Germany). NH4+ concentrations were determined colorimetrically by automated flow injection analysis (FIAS 300, Perkin-Elmer, Waltham, Massachusetts, USA). NO3− concentrations were measured colorimetrically according to Norman and Stucki (1981). Potential soil net nitrogen (N) mineralization was assessed during an 8-week incubation period under controlled moisture (60% of field capacity), temperature (20 °C) and light conditions (dark) in the laboratory. We weighed duplicate samples of fresh soil equivalent to 8 g dry soil (24 h at 104 °C) into 50 mL Falcon tubes. Soil samples were extracted for NH4+ and NO3− at the beginning and after eight weeks as described above. Soil net N mineralization was calculated as the difference between the inorganic nitrogen (NH4+ and NO3−) before and after the incubation (Hart et al. 1994), corrected for the total incubation time and represented per day values expressed as mg N kg-1 soil d-1.

To assess soil physical properties, we randomly collected one undisturbed soil core per 4 m2 subplot (5 cm diameter, 12 cm depth) in a steel cylinder that fit into the slide hammer (AMS Samplers, American Falls, Idaho, USA). The cylinder was capped in the field to avoid disturbance. We then measured field capacity in the laboratory. For this purpose, the cylinder and soil therein were saturated in a water bath and drained on a sand/silt-bed with a suction corresponding to 60 cm hydrostatic head. The moist soil was dried at 105 °C to constant weight. Field capacity was calculated by dividing the mass of water by the total mass of wet soil contained at 60 cm hydrostatic head and used to describe water holding capacity. Thereafter, samples were passed through a 4 mm mesh. Fine-earth and skeleton fractions were weighed separately to assess bulk soil density (fine-earth plus skeleton), density of fine earth, and proportion of skeleton. Particle density was determined with the pycnometer method (Blake and Hartge 1986), and total porosity and proportion of fine pores were calculated (Danielson and Sutherland 1986). Clay, silt, and sand contents were quantified with the sediment method (Gee and Bauder 1986).

Surface and soil temperature (12 cm depth, water-resistant digital pocket thermometer; IP65, H-B Instrument, Trappe, Pennsylvania, USA) as well as volumetric soil moisture content (12 cm depth, time domain reflectometry; Field-Scout TDR 300, Spectrum Technologies, Aurora, Illinois, USA) were measured at five random locations within the 4 m2 subplots every month from June to September. We calculated the standard deviation of each temperature and moisture measure over four months to describe seasonal variations. Slope inclination was determined at plot-level via GPS measurements (GPS 1200, Leica Geosystem, Heerbrugg, Switzerland) and categorized into slope gradient classes according to FAO standards (1990). Thickness of the topsoil horizon (equivalent to Ah or Aa horizon) was determined at one soil monolith (30 x 30 x 30 cm3) per 4 m2 subplot in cm and rounded to next integer.

 References

Adamczyk, M., F. Hagedorn, S. Wipf, J. Donhauser, P. Vittoz, C. Rixen, A. Frossard, J. Theurillat, and B. Frey. 2019. The soil microbiome of GLORIA mountain summits in the Swiss Alps. Frontiers in Microbiology 10:1080-1101.

Blake, G.R., and K. H. Hartge. 1986. Particle Density. Pages 377-382 in A. Klute, editor. Methods of soil analysis: Part 1—Physical and mineralogical methods. Soil Science Society of America (SSSA) Inc., Madison.

Bongers, T. 1988. De nematoden van Nederland. Stichting Uitgeverij van de Koniklijke Nederlandse Natuurhistorische Verenigung (KNNV), Utrecht.

Bongers, T. 1990. The maturity index: an ecological measure of environmental disturbance based on nematode species composition. Oecologia 83:14-19.

Bouché, M. B. 1977. Strategies lombriciennes. Ecological Bulletins 25:122-132.

Christian, E., and A. Zicsi. 1999. Ein synoptischer Bestimmungsschlüssel der Regenwürmer Österreichs (Oligochaeta: Lumbricidae). Die Bodenkultur 50:121-131.

Danielson, R. E., and P. L. Sutherland. 1986. Porosity. Pages 443-461 in A. Klute, editor. Methods of soil analysis: Part 1—Physical and mineralogical methods. Soil Science Society of America (SSSA) Inc., Madison.

Delarze, R., Y. Gonseth, S. Eggenberg, and M. Vust. 2015. Lebensräume der Schweiz: Ökologie ‐ Gefährdung ‐ Kennarten, Ott Verlag, Bern.

Edgar, R. C. 2010. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26:2460–2461.

Edgar, R. C. 2013. UPARSE: highly accurate OTU sequences from microbial amplicon reads. Nature Methods 10:996–998.

FAO. 1990. Guidelines for soil description, third ed. Land and Water Development Division at the Food and Agriculture Organization of the United Nations (FAO), Rome.

Frey, B., T. Rime, M. Phillips, B. Stierli, I. Hajdas, F. Widmer, and M. Hartmann. 2016. Microbial diversity in European alpine permafrost and active layers. FEMS Microbiology Ecology 92:fiw018.

Gee, G.W., and J. W. Bauder. 1986. Particle-size analysis. Pages 383-411 in A. Klute, editor. Methods of soil analysis: Part 1—Physical and mineralogical methods. Soil Science Society of America (SSSA) Inc., Madison.

Hart, S. C, J. M. Stark, E. A. Davidson, and M. K. Firestone. 1994. Nitrogen mineralization, immobilization, and nitrification. Pages 985-1016 in R. W. Weaver, S. Angle, P. Bottomley, D. Bezdicek, S. Smith, A. Tabatabai, and A. Wollum, editors. Methods of soil analysis: Part 2—Microbiological and biochemical properties. Soil Science Society of America (SSSA) Inc., Madison.

Lauber, K., Wagner, G., 1996. Flora Helvetica. Flora der Schweiz. Haupt Verlag, Bern.

MeteoSchweiz, 2018. Klimabulletin Jahr 2017. MeteoSchweiz, Zürich.

Meyer, S. T., C. Koch, and W. W. Weisser. 2015. Towards a standardized rapid ecosystem function assessment (REFA). Trends in Ecology and Evolution 30:390-397.

Neff, F., M. C. Resch, A. Marty, J. Rolley, M. Schütz, A. C. Risch, and M. M. Gossner. 2020. Long-term restoration success of insect herbivore communities in semi-natural grasslands – a functional approach. Ecological Applications 0:e02133

Nguyen, N.H., Z. W. Song, S. T. Bates, S. Branco, L. Tedersoo, J. Menke, J. S. Schilling, and P. G. Kennedy. 2016. FUNGuild: an open annotation tool for parsing fungal community datasets by ecological guild. Fungal Ecology 20:241–248.

Nilsson, R. H., K.-H. Larsson, A. F. S. Taylor, J. Bengtsson-Palme, T. S. Jeppesen, D. Schigel, P. G. Kennedy, K. Picard, F. O. Glöckner, L. Tedersoo, I. Saar, U. Kõljalg, and K. Abarenkov. 2018. The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications. Nucleic Acids Research 47:259–264.

Norman, R. J., and J. W. Stucki. 1981. The Determination of Nitrate and Nitrite in Soil Extracts by Ultraviolet Spectrophotometry. Soil Science Society of America Journal 45:347-353.

Oostenbrink, M. 1960. Estimating nematode populations by some selected methods. Pages 81-101 in J. J. Sasser, and W. R. Jenkins, editors. Nematology. Univ. of North Carolina Press, Chapel Hill.

Quast, C., E. Pruesse, P. Yilmaz, J. Gerken, T. Schweer, P. Yarza, J. Peplies, and F. O. Glöckner. 2013. The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Research 41:590-596.

Resch, M. C., M. Schütz, U. Graf, R. Wagenaar, W.H. van der Putten, and A. C. Risch. 2019. Does topsoil removal in grassland restoration benefit both soil nematode and plant communities? Journal of Applied Ecology 56:1782-1793.

Schuldt, A., A. Ebeling, M. Kunz, M. Staab, C. Guimarães-Steinicke, D. Bachmann, N. Buchmann, W. Durka, A. Fichtner, F. Fornoff, W. Härdtle, L. R. Hertzog, A-N. Klein, C. Roscher, J. Schaller, von G. Oheimb, A. Weigelt, W. Weisser, C.Wirth, J. Zhang, H. Bruelheide, and N. Eisenhauer. 2019. Multiple plant diversity components drive consumer communities across ecosystems. Nature Communications 10:1460.

Tedersoo, L., M. Bahram, S. Põlme, U. Kõljalg, N. S. Yorou, R. Wijesundera, L. Villarreal Ruiz, A. M. Vasco-Palacios, P. Q. Thu, A. Suija, M. E. Smith, C. Sharp, E. Saluveer, A. Saitta, M. Rosas, T. Riit, D. Ratkowsky, K. Pritsch, K. Põldmaa, M. Piepenbring, C. Phosri, M. Peterson, K. Parts, K. Pärtel, E. Otsing, E. Nouhra, A. L. Njouonkou, R. H. Nilsson, L. N. Morgado, J. Mayor, T. W. May, L. Majuakim, D. J. Lodge, S. See Lee, K.-H. Larsson, P. Kohout, K. Hosaka, I. Hiiesalu, T. W. Henkel, H. Harend, L.-D. Guo, A. Greslebin, G. Grelet, J. Geml, G. Gates, W. Dunstan, C. Dunk, R. Frenkhan, L. Dearnaley, A. De Kesel, T. Dang, X. Chen, F. Buegger, F. Q. Brearley, G. Bonito, S. Anslan, S. Abell, and K. Abarenkov. 2014. Global diversity and geography of soil fungi. Science 346:1256688.

Thomas, G.W. 1982. Exchangeable cations. Pages 159-165 in A. L. Page, R. H. Miller, and D. R. Keeney, editors. Methods of Soil Analysis: Part 2—Chemical and microbiological properties. Soil Science Society of America (SSSA) Inc., Madison.

Walthert, L., U. Graf, A. Kammer, J. Luster, D. Pezzotta, S. Zimmermann, and F. Hagedorn. 2010. Determination of organic and inorganic carbon, δ13C, and nitrogen in soils containing carbonates after acid fumigation with HCl. Journal of Plant Nutrition and Soil Sciences 173:207-216.

Yeates, G. W., T. Bongers, R. G. M. de Goede, D. W. Freckman, and S. S. Georgieva. 1993. Feeding habits in soil nematode families and genera – an outline for soil ecologists. Journal of Nematology 25:315-331.

bacteria

display_name: bacteria

biodiversity

display_name: biodiversity

ecosystem-multifunctionality

display_name: ecosystem-multifunctionality

fungi

display_name: fungi

grassland

display_name: grassland

mineralization

display_name: mineralization

nematodes

display_name: nematodes

restoration

display_name: restoration

soil-biodiversity

display_name: soil-biodiversity

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Restoring grassland multifunctionality


en: digital-planning swiss-geodata open-source cable-yarding digital-elevation-model geoinformation-system wms-data seilaplan qgis-plugin

en: WMS-Layer als Hintergrundkarten laden

en: View video on youtube!

en:
In order to digitally plan a cable line using the QGIS plugin ‘Seilaplan’, maps with various background information are helpful. In this tutorial we show you how to obtain maps that are helpful for cable line planning, for example a national map of Switzerland at different scales, the NFI vegetation height model or the NFI forest mix rate. For this we explain what WMS datasets are and how to integrate them into QGIS. No download of large data is needed for this, only a good internet connection. Please note that the tutorial language is German!

Link for the integration of WMS data: https://wms.geo.admin.ch/

Link to the description on the Swisstopo website:
https://www.geo.admin.ch/en/geo-services/geo-services/portrayal-services-web-mapping/web-map-services-wms.html

Link to the Seilaplan website: https://seilaplan.wsl.ch

**************************

Für die Verwendung des QGIS Plugins Seilaplan zur digitalen Seillinienplanung sind verschiedene Hintergrundkarten hilfreich. In diesem Tutorialvideo zeigen wir, was WMS Daten sind und wie man diese in QGIS einbinden kann. Dafür müssen die Daten nicht heruntergeladen werden. Es braucht lediglich eine gute Internetverbindung. Für die Seillinienplanung hilfreiche Karten sind bspw. die Landeskarte der Schweiz in verschiedenen Massstäben, das Vegetationshöhenmodell LFI oder der Waldmischungsgrad LFI.

Link zur Einbindung der WMS Daten: https://wms.geo.admin.ch/

Link zur Beschreibung auf der Swisstopo Webseite: https://www.geo.admin.ch/de/geo-dienstleistungen/geodienste/darstellungsdienste-webmapping-webgis-anwendungen/web-map-services-wms.html

Link zur Seilaplan-Website: https://seilaplan.wsl.ch

cable-yarding

display_name: cable-yarding

digital-elevation-model

display_name: digital-elevation-model

digital-planning

display_name: digital-planning

geoinformation-system

display_name: geoinformation-system

open-source

display_name: open-source

qgis-plugin

display_name: qgis-plugin

seilaplan

display_name: seilaplan

swiss-geodata

display_name: swiss-geodata

wms-data

display_name: wms-data

en: Seilaplan Tutorial: Load WMS layers as background maps


weather-station-davos-wolfgang

maintainer: Jörg Wieder

title_for_slug: weather-station-davos-wolfgang

en: raclets weather pressure temperature relative-humidity

en: Weather Station Davos Wolfgang

media_type: text/csv

en: The data file contains date and time (YYYY-MM-DD hh:mm:ss) in UTC, temperature (°C), relative humidity (%), pressure (hPa) at 10 m above ground and above sea level. The data was averaged over 10 minutes.

format: CSV

mimetype: text/csv

en: The dataset contains weather parameters measured at Davos Wolfgang (LON: 9.853594, LAT: 46.835577).

pressure

display_name: pressure

raclets

display_name: raclets

relative-humidity

display_name: relative-humidity

temperature

display_name: temperature

weather

display_name: weather


en: tree-volume terrestiral-laserscanning biomass forest-inventory lidar single-tree

en: Individual tree parameters and volume estimates based on TLS point clouds and allometric models

en:
"ASM" denotes volume estimates calculated by allometric scaling models (as used in Swiss NFI), based on tree height, DBH and D7.
"QSM" denotes volume estimates derived from TLS point clouds by quantitative structure models (QSM).
The remaining variables are geometrical features directly calculated from single tree TLS point clouds.
For more detailed variable descriptions see related publication.

en:
 Dataset
This dataset is based on terrestrial laser scanning (TLS) data acquired during winter 2020/2021 in leaf-off conditions, with a Leica BLK 360 instrument following a tree-centric scanning pattern.
The data was acquired on two sites (47.42°N 8.49°E and 47.504°N, 7.78°E), both of which were managed mixed temperate forest stands.
Individual trees were semi-automatically segmented from the co-registered TLS point clouds.

 Background
Accurate estimates of individual tree volume or biomass within forest inventories are essential for calibration and validation of biomass mapping products based on Earth observation data.
Terrestrial laser scanning (TLS) enables detailed and non-destructive volume estimation of individual trees, with existing approaches ranging from simple geometrical features to virtual 3D reconstruction of entire trees. Validating such approaches with weight measurements is a key step before the integration of TLS or other close-range technologies into operational applications such as forest inventories.
In this study, we firstly evaluate individual tree volume estimation approaches based on 3D reconstruction through quantitative structure models (QSM) against destructive reference data of 60 trees and compare them to operational allometric scaling models (ASM).
Secondly, we determine the explanatory power of TLS-derived geometric parameters regarding total tree, stem, coarse wood and fine branch volume.

biomass

display_name: biomass

forest-inventory

display_name: forest-inventory

lidar

display_name: lidar

single-tree

display_name: single-tree

terrestiral-laserscanning

display_name: terrestiral-laserscanning

tree-volume

display_name: tree-volume

en: Individual tree TLS point clouds for tree volume estimation


maintainer: Christian G. Sommer

en: wind-tunnel kinect snow wind-crust wind-packing

en: Kinect data

en: Links to the dataset

en: README

en: Describes the dataset in detail

en: Processing scripts

en: Contains the Matlab- and R-scripts used to process the Kinect data

en:
This data sets contains the Microsoft Kinect data from 15 wind tunnel experiments on wind-packing / wind crust formation. These experiments were performed in the winter 2016/17. The Kinect measures distributed snow depth.

The Kinect data is organized per experiment. Each experiment subfolder contains the processed Kinect depth images and some additional files.

Please refer to the README for more details on the data. The processing scripts are available for download as well. The scripts are mainly provided as documentation and would need to be adjusted to be used.

This dataset is the basis of the following publication:

Sommer C.G., Lehning M. & Fierz C. (2018). Wind Tunnel Experiments: Influence of Erosion and Deposition on Wind-Packing of New Snow. Front. Earth Sci. 6:4. doi: 10.3389/feart.2018.00004

kinect

display_name: kinect

snow

display_name: snow

wind-crust

display_name: wind-crust

wind-packing

display_name: wind-packing

wind-tunnel

display_name: wind-tunnel

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: Wind crust formation: Microsoft Kinect data


maintainer: Yohann Chauvier

en: large-scale synonyms flags r-package taxonomy species-distribution landsca hard-limit conservation ecoregions gbif species-observations accepted-name filtering occurrence-records range-maps

en: gbif.range R package version 0.2 (deprecated)

en: GitHub URL

en: gbif.range R package version 1.1 (current)

en: wsl.gbif R package version 0.1 (deprecated)

en: Test version, not to be used.

en: Although species range may be obtained using expert maps or modeling methods, expert data is often species-limited and statistical models need more technical expertise as well as many species observations. When unavailable, such information may be extracted from the Global Biodiversity Information facility (GBIF), the largest public data repository inventorying georeferenced species observations worldwide. However, retrieving GBIF records at large scale may be tedious if users are unaware of specific tools and functions that need to be employed. Here we present *gbif.range*, an R library that contains automated methods to generate species range maps from scratch using in-house ecoregions shapefiles and an easy-to-use GBIF download wrapper. Finally, this library also offers a set of additional very useful parameters and functions for large GBIF datasets (generate doi, extract GBIF taxonomy, records filtering...). [gbif.range R project](https://github.com/8Ginette8/gbif.range)

accepted-name

display_name: accepted-name

conservation

display_name: conservation

ecoregions

display_name: ecoregions

filtering

display_name: filtering

flags

display_name: flags

gbif

display_name: gbif

hard-limit

display_name: hard-limit

landsca

display_name: landsca

large-scale

display_name: large-scale

occurrence-records

display_name: occurrence-records

r-package

display_name: r-package

range-maps

display_name: range-maps

species-distribution

display_name: species-distribution

species-observations

display_name: species-observations

synonyms

display_name: synonyms

taxonomy

display_name: taxonomy

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: gbif.range - An R package to generate species range maps based on ecoregions and a user-friendly GBIF wrapper


en: shortwave-radiation winter-energy-production photovoltaic albedo snow

en: Data Forward Scattering

en: GROUNDEYE model for multiple forward scattering in snow-covered terrain. Meteorological and topographical input data set for the Meierhofertäli near Davos, Switzerland, September 2017 - August 2018. Output data for September 2017 - August 2018 at hourly resolution and every pixel. Post-processing scripts for plotting and analysis.

en:
 Overview
We present GROUNDEYE, a new model of radiative transfer over mountainous terrain, which considers for the first time the forward scattering properties of snow.
Embedded in the surface process model Alpine3D, the new terrain radiation model GROUNDEYE receives interpolated real weather data with diffuse and direct broadband shortwave radiation for each pixel as well as a spatially variable plane albedo from the module SNOWPACK.

 Format
The GROUNDEYE model is written in c++, as is the entire environment of Alpine3d. The input and output data sets are .xlsx or .txt format, pre- and postprocessing including the generation of all figures is in .R format.

 Structure
In Data_Forward_Scattering.zip you will find all necessary data and model details to
reproduce the results of the JGR publication "How forward-scattering snow and terrain change the Alpine radiation balance with application to solar panels"

 - 	Model Input Data contains the meteorological and topographic input data sets, the BRDF, and preprocessing scripts.
 - Model Code contains the full model Alpine3d including the radiative transfer module GROUNDEYE.
 - Model Output Data contains the results of the simulation of terrain irradiance and irradiance of solar panels; hourly resolution, 1. Sptember 2017 - 31. August 2018.
 - Measurements Solar Testsite contains information and measurements of the solar testsite at the Totalp near Davos, Switzerland.
 - Postprocessing contains all R-Scripts used for the analysis and
plotting of the corresponding data.

In each of these folders you will find detailed information in
the file 'About this Folder.txt'.

albedo

display_name: albedo

photovoltaic

display_name: photovoltaic

shortwave-radiation

display_name: shortwave-radiation

snow

display_name: snow

winter-energy-production

display_name: winter-energy-production

en: Data, Code Link and Metadata on Forward Scattering of Snow at Totalp


maintainer: Jürg Schweizer

en: snow-avalanche avalanche-size avalanche-forcasting danger-level avalanche-activity

en: Readme

en: The Readme file contains the description of the two data files.

en: Snow avalanche data

en: This data file includes data on the avalanches mapped in the region of Davos.

en: Avalanche activity data

en: This data file includes data on the avalanche activity per day aggregated from the avalanche data.

en:
These data include all avalanches that were mapped in the region of Davos, Switzerland during the winters 1998-1999 to 2018-2019 (21 years), in total 13,918 avalanches, and the corresponding forecast danger level valid on the day of avalanche occurrence, 3533 days and danger ratings in total.

This avalanche activity data set was analysed and results published by Schweizer et al. (2020). They found that the
number of avalanches per day strongly increased with increasing danger level, but avalanche size was poorly related to avalanche danger level.

The data are provided in two files: the first includes the avalanche data (13,918 records); the second includes the avalanche activity per day (3533 records).
Please refer to the Read-me file for further details on the data.

These data are the basis of the following publication:
Schweizer, J., Mitterer, C., Techel, F., Stoffel, A. and Reuter, B., 2020. On the relation between avalanche occurrence and avalanche danger level. The Cryosphere, 14, 737-750, https://doi.org/10.5194/tc-14-737-2020.

avalanche-activity

display_name: avalanche-activity

avalanche-forcasting

display_name: avalanche-forcasting

avalanche-size

display_name: avalanche-size

danger-level

display_name: danger-level

snow-avalanche

display_name: snow-avalanche

educ

en: Education, culture and sport

en: Snow avalanche data Davos, Switzerland, 1999-2019


maintainer: Markus Schlegel

en: edna metabarcoding spore-dispersal air-sampling monitoring

en: Data files and analysis scripts (Version 1)

en: This ZIP archive contains the data and source code necessary to reproduce the analyses for the manuscript "A case study on the application of spore sampling for the monitoring of fungi". Please refer to README.pdf inside the archive for more information.

en:
Resources associated with the manuscript *A case study on the application of spore sampling for the monitoring of fungi* (Schlegel et al. 2023, submitted).
Airborne environmental DNA (eDNA) monitoring of fungi was evaluated on a species-rich grassland site. Extensive fruiting body surveys yielded 29 waxcap and clavarioid species, 19 of which were also detectable in air eDNA. The analysis indicates that spores of locally occurring fruiting bodies were detected, in addition to a large diversity of common fungal species, while rare and threatened species were underrepresented in the air.
The contents of the dataset (ZIP archive):
* All analysis scripts in [R-Markdown](https://rmarkdown.rstudio.com) format, including the rendered PDF output with figures and tables (*analysis* directory)
* eDNA sample metadata (*amplicon_meta*) and results of the amplicon clustering (*amplicon_data*) and the source code of the pipeline (*amplicon_pipeline*)
* positions of all fruiting body groups found in the surveys (3838 GPS points) (*surveys*)
* positions of the spore traps, taxonomy of studied grassland fungi and red-list species, and many more resources
Please refer to `README.pdf` inside the archive for a complete description of the file structure and information on how to reproduce the analyses.

air-sampling

display_name: air-sampling

edna

display_name: edna

metabarcoding

display_name: metabarcoding

monitoring

display_name: monitoring

spore-dispersal

display_name: spore-dispersal

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Supporting information for case study on the application of spore sampling for the monitoring of fungi


maintainer: Matthias Haeni

en: temperature swiss-forest-lab climate-change relative-humidity precipitation wind-speed par long-term meteorology meteo

en: Site photo of the field station (JUF)

en: Site photo of the field station from the side.

mimetype: image/jpeg

en: Site aerial photo (Jussy)

en: Site aerial photo from both Jussy stations. Source: Google. 2016. Site aerial photo from both Jussy stations. Retrieved November 11, 2016, from https://www.google.ch/maps

en: Site photo of the forest station (JUB)

en: Site photo of the forest station from the side.

en: Data plot of the forest station (JUB)

en: Data overview for air temperature, relative humidity, precipitation, PAR, wind speed.

en: Forest station data (JUB)

en: Data file.

en: Data plot of the field station (JUF)

en: High quality meteorological data are needed for long-term forest ecosystem research, particularly in the light of global change. The long-term data series published here comprises almost 20 years of measurements for two meteorological stations in Jussy in Switzerland where one station is located within a natural broad-leaved forest stand (JUB) with sessile oak (_Quercus petrea_; 90 yrs), aspen (_Populus tremula_; 60 yrs) and European hornbeam (_Carpinus betulus_; 60 yrs) as dominant tree species. A second station is situated in the very vicinity outside of the forest (field station, JUF). The meteorological time series are presented in hourly time resolution of air temperature, relative humidity, precipitation, photosynthetically active radiation (PAR) and wind speed. Jussy is part of the Long-term Forest Ecosystem Research Programme (LWF) established and maintained by the Swiss Federal Research Institute WSL.

climate-change

display_name: climate-change

long-term

display_name: long-term

meteo

display_name: meteo

meteorology

display_name: meteorology

par

display_name: par

precipitation

display_name: precipitation

relative-humidity

display_name: relative-humidity

swiss-forest-lab

display_name: swiss-forest-lab

temperature

display_name: temperature

wind-speed

display_name: wind-speed

en: Jussy, Switzerland: Long-term forest meteorological data from the Long-term Forest Ecosystem Research Programme (LWF), from 1997 onwards


maintainer: Giulia Francesca Azzurra Donati

en: urban-spatial-planning ecological-corridors human-dominated-landscapes circuit-theory integrated-modelling biodiversity

en: Binarized "green" and "grey" landcover data (Cantons of Aargau and Zürich)

en: "Green" landcover refers to lawns and vegetated urban surfaces such as, for example private gardens, public parks, cemeteries, green stripes along roadsides, etc. While "grey" landcover refers to impervious grounds such as roads, troittoirs, other impervious. Binarized maps, 30x30m resolution.

en: Amphibian whole life cycle predictors - 10m resolution

en:
Amphibian whole life cycle predictors include 6 variable types:
(1)	Topographic – slope [°]: derived from the Swiss Topographical Landscape model (swissTLM 3D 2015) at 2 m resolution (elevation uncertainty ± 0.5m) and, subsequently, aggregated to a median value;
(2)	Hydrologic: two predictors including nearest distance to water [m] (all water-related objects and rasterized lotic, lentic and reedbeds from the regional cadastral maps – AV: Daten der Amtliche Vermessung) and runoff coefficient [C] (between 0 and 1 relating amount of runoff to amount of precipitation, mapped AV: Daten der Amtliche Vermessung data against literature values for different land covers);
(3)	Edaphic – soil moisture variability (not available): can gathered from the spatial modelling of Ecological Indicator Values in Switzerland (Descombes et al., 2020) and resampled from 100m to 10m;
(4)	Vegetation: we calculated the median and standard deviation of the Normalized Difference Vegetation Index (NDVI) from all available cloud free Sentinel-2 pixels available between April and October for the years 2016 to 2019 (Drusch et al., 2012) and the median vegetation height [m] (not available) can gathered from Ginzler and Hobi (2015);
(5)	Land-use derived: includes three predictors, grassland density [grassland/cell] (not available) - can be gathered from Pazur et al. (2021), total grasslands area evaluated using a spatial weight matrix and a 250m neighborhood radius around each cell; urbanization [buildings/cell] – average building density for a 250m neighborhood around each cell based on the AV: Daten der Amtliche Vermessung ; and traffic intensity [vehicles/day] – average daily vehicle count (Nationales Personenverkehrsmodells);
(6)	Movement-ecology related: includes three predictors of proximity – nearest forest distance [m]; nearest rock-gravel and sandy area (RGS) distance [m] and nearest road distance [m] (considering any road type) – all calculated based on the AV: Daten der Amtliche Vermessung maps.

en: Amphibian species specific landscape resistance maps.

en: For each amphibian species we used the weighted average Ensemble model suitability map and converted it to a resistance map using an exponential decay function following (Duflot et al., 2018) using the species-specific mpa threshold previously computed (Preau et al., 2020). The function assigns a resistance value of 1,000 when habitat suitability equals zero, and a value of one when habitat suitability is greater than or equal to the binarization threshold. The exponential shape strengthens the barrier effect of less favorable areas.

en: Amphibian monitoring data

en: Processed amphibian occurrence data (2017-2019) in the cantons of Aargau and Zürich. The dataset includes information for the following species: _Alytes obstetricans_,_Bombina variegata_, _Bufo bufo_, _Hyla arborea_, _Ichtyosaura alpestris_, _Lissotriton helveticus_, _Lissotriton vulgaris_, _Rana temporaria_, _Salamandra salamandra_, and _Triturus cristatus_.

en: Amphibian breeding sites of national importance - cantons of Aargau and Zürich

en: Amphibian breeding sites of national importance (focal nodes) in the cantons of Aargau and Zürich, 30x30 m resolution, binarised ascii format.

en: The data includes (1) amphibian occurrence data (2017-2019) for ten species across the cantons of Aargau and Zürich gathered from the Coordination Center for the Protection of Amphibians and Reptiles of Switzerland (http://www.karch.ch), (2) amphibian whole-life cycle environmental predictors (i.e. topographic, hydrologic, edaphic, vegetation, land-use derived, movement-ecology related), and (3) local urban "green" and "grey" landcover data which can be used to identify opportunities for Blue-Green Infrastructure (through green or grey transitions) in support of regional landscape connectivity.

biodiversity

display_name: biodiversity

circuit-theory

display_name: circuit-theory

ecological-corridors

display_name: ecological-corridors

human-dominated-landscapes

display_name: human-dominated-landscapes

integrated-modelling

display_name: integrated-modelling

urban-spatial-planning

display_name: urban-spatial-planning

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: Amphibian and urban-rural landscape data Swiss Lowlands


vegetation-height-model-nfi

maintainer: Christian Ginzler

title_for_slug: vegetation-height-model-nfi

en: point-cloud vegetation-height-model 3d photogrammety forest

en: 2015 Vegetation Height Model NFI

en:
Data 'Vegetation Height Model NFI 2015' available on request (christian.ginzler@wsl.ch).

A national vegetation height model was calculated for Switzerland using digital aerial images. We used the stereo aerial images acquired by the Federal Office of Topography swisstopo using the ADS80 sensor to first calculate a digital surface model (DSM) with a very high spatial resolution (1 × 1 m). The DSM was then normalized to obtain the actual vegetation heights using the digital terrain model (DTM) SwissAlti3D based on airborne laser data. Buildings are masked out using the NDVI information of the aerial images to produce a vegetation height model, and to produce a vegetation height model (VHM). Such a model will be calculated in the framework of the Swiss National Forest Inventory (NFI) with consistent methods and a very high level of detail. For covering the whole of Switzerland, we used summer aerial images from 2010 to 2015.

en: 2012 Vegetation Height Model NFI

en:
Data 'Vegetation Height Model NFI 2012' available on request (christian.ginzler@wsl.ch).

A national vegetation height model was calculated for Switzerland using digital aerial images. We used the stereo aerial images acquired by the Federal Office of Topography swisstopo using the ADS80 sensor to first calculate a digital surface model (DSM) with a very high spatial resolution (1 × 1 m). The DSM was then normalized to obtain the actual vegetation heights using the digital terrain model (DTM) SwissAlti3D based on airborne laser data. Buildings are masked out using the NDVI information of the aerial images to produce a vegetation height model, and to produce a vegetation height model (VHM). Such a model will be calculated in the framework of the Swiss National Forest Inventory (NFI) with consistent methods and a very high level of detail. For covering the whole of Switzerland, we used summer aerial images from 2007 to 2012.

en: 2016 Vegetation Height Model NFI

en:
Data 'Vegetation Height Model NFI 2016' available on request (christian.ginzler@wsl.ch).

A national vegetation height model was calculated for Switzerland using digital aerial images. We used the stereo aerial images acquired by the Federal Office of Topography swisstopo using the ADS80 sensor to first calculate a digital surface model (DSM) with a very high spatial resolution (1 × 1 m). The DSM was then normalized to obtain the actual vegetation heights using the digital terrain model (DTM) SwissAlti3D based on airborne laser data. Buildings are masked out using the NDVI information of the aerial images to produce a vegetation height model, and to produce a vegetation height model (VHM). Such a model will be calculated in the framework of the Swiss National Forest Inventory (NFI) with consistent methods and a very high level of detail. For covering the whole of Switzerland, we used summer aerial images from 2011 to 2016.

en: Thumbnail

en: Countrywide Stereo-Image Matching for Updating Digital Surface Models in the Framework of the Swiss National Forest Inventory

en: 2019 Vegetation Height Model NFI (current)

en:
Data 'Vegetation Height Model NFI 2019' available on request (christian.ginzler@wsl.ch).

A national vegetation height model was calculated for Switzerland using digital aerial images. We used the stereo aerial images acquired by the Federal Office of Topography swisstopo using the ADS80 sensor to first calculate a digital surface model (DSM) with a very high spatial resolution (1 × 1 m). The DSM was then normalized to obtain the actual vegetation heights using the digital terrain model (DTM) SwissAlti3D based on airborne laser data. Buildings are masked out using the NDVI information of the aerial images to produce a vegetation height model, and to produce a vegetation height model (VHM). Such a model will be calculated in the framework of the Swiss National Forest Inventory (NFI) with consistent methods and a very high level of detail. For covering the whole of Switzerland, we used summer aerial images from 2013 to 2019.

en:
A national vegetation height model was calculated for Switzerland using digital aerial images.
We used the stereo aerial images acquired by the Federal Office of Topography swisstopo using the ADS80 sensor to first calculate a digital surface model (DSM) with a very high spatial resolution
(1 × 1 m and 0.5 x 0.5 m). The DSM was then normalized to obtain the actual
vegetation heights using a digital terrain model (DTM)
based on laser data with the buildings masked out, and to
produce a vegetation height model (VHM). Such a model
will be calculated in the framework of the Swiss National Forest Inventory (NFI) with consistent methods and a very
high level of detail. For covering the whole of Switzerland,
we use summer aerial images from six years.

Latest version is from 2019.

forest

display_name: forest

photogrammety

display_name: photogrammety

point-cloud

display_name: point-cloud

vegetation-height-model

display_name: vegetation-height-model

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Vegetation Height Model NFI