maintainer: Virginie Marques

en: biodiversity fjord environmental-dna fish plankton marine dna-metabarcoding

en: Code, data and figures

en: Here there are all the data and code to reproduce the figures and analysis presented in the paper, with a README.md file

en: Metabarcoding data

en: Raw metabarcoding data for both primers (teleo and 18S) and corresponding file to perform the demultiplexing and primer trimming

en:
This dataset contains the raw environmental DNA data associated with the publication *Environmental drivers of eukaryotic plankton and fish biodiversity in an Arctic fjord* in the journal Polar Biology (2023).

 Methods

**Sampling**
We sampled the Lilliehöök fjord on the west coast of Spitsbergen (Svalbard, Norway) over 3 days from 3 to 5 of August 2021. Samples were taken from the glacier front up to the fjord mouth of the Krossfjorden system, around 30 km long, after the Lilliehöök fjord merged with the mouth of Möller fjord. The fjord’s maximum depth has been recorded at 373 m (Svendsen et al. 2002) and has no sill at its entrance, thereby facilitating water exchange with the open ocean of the West Spitsbergen Current. We used a research vessel to sample 5 sites for a total of 15 samples, sampling 3 depths per site (3-m, chlorophyll a maximum and 85-m, unless sea floor was shallower). Shallow and intermediate samples between 3-m and 12-m represent ~35-L of water filtered in-situ using long tubing and a peristaltic pump, and all other deeper samples were taken from a total of 3 Niskin bottles (General Oceanics), representing 22-L of water sampled per sample. Water was filtered through a VigiDNA filtration capsule (SPYGEN) with a 0.20-µm pore size using an Athena peristaltic pump (Proactive Environmental Products, Bradenton, Florida) with a flow rate of ~1-L/min. Each sample was handled with single use tubing and gloves.

**Molecular**
To perform the amplification, we used two sets of primers: teleo (forward: ACACCGCCCGTCACTCT, reverse: CTTCCGGTACACTTACCATG; Valentini et al. 2016) and the universal eukaryotic 1389F/1510R primer pair, amplifying the V9-18S rDNA gene (Amaral-Zettler et al. 2009) (forward: TTGTACACACCGCCC, reverse: CCTTCYGCAGGTTCACCTAC).

 Data content:

+ Metabarcoding data: This zip file contains the 2 sequencing libraries filtered to only retain the samples used in the present study.
+ Code, data and figure: This zip file contains all data and code to reproduce the figures and the analysis in the study, with an associated README explaining the content of each folder.

 Additional informations
For more details, please see the Methods in the associated publication: DOI: 10.1007/s00300-023-03187-9.

biodiversity

display_name: biodiversity

dna-metabarcoding

display_name: dna-metabarcoding

environmental-dna

display_name: environmental-dna

fish

display_name: fish

fjord

display_name: fjord

marine

display_name: marine

plankton

display_name: plankton

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: Data: Environmental drivers of eukaryotic plankton and fish biodiversity in an Arctic fjord


stem-number

title_for_slug: stem-number

state: active

type: dataset

format: SERVICE

en:
Number of stems of living trees and shrubs (standing and lying) starting at 12 cm dbh.

Citation:
 > _Abegg, M.; Brändli, U.-B.; Cioldi, F.; Fischer, C.; Herold-Bonardi, A.; Huber M.; Keller, M.; Meile, R.; Rösler, E.; Speich, S.; Traub, B.; Vidondo, B. (2014). Fourth national forest inventory - result tables and maps on the Internet for the NFI 2009-2013 (NFI4b). [Published online 06.11.2014] Available from World Wide Web http://www.lfi.ch/resultate/ Birmensdorf, Swiss Federal Research Institute WSL. [doi:10.21258/1057112](https://doi.org/10.21258/1057112)_

accessible-forest-without-shrub-forest

display_name: accessible-forest-without-shrub-forest

altitudinal-vegetation-zone

display_name: altitudinal-vegetation-zone

biogeographical-region

display_name: biogeographical-region

canton

display_name: canton

conifers-broadleaves

display_name: conifers-broadleaves

diameter-classes

display_name: diameter-classes

economic-region

display_name: economic-region

exotic-species-neophytes

display_name: exotic-species-neophytes

forest-type-and-stage-of-development

display_name: forest-type-and-stage-of-development

important-exotic-species-neophytes

display_name: important-exotic-species-neophytes

lower-higher-altitudinal-zones

display_name: lower-higher-altitudinal-zones

main-tree-species

display_name: main-tree-species

number-of-damages

display_name: number-of-damages

ownership

display_name: ownership

production-region

display_name: production-region

protection-forest-region

display_name: protection-forest-region

stage-of-stand-development

display_name: stage-of-stand-development

stem-number

display_name: stem-number

tree-species-woody-species

display_name: tree-species-woody-species

educ

fr: Éducation, culture et sport

de: Bildung, Kultur und Sport

it: Istruzione, cultura e sport

fr: EnviDat: le portail de données environnementales

de: EnviDat: das Umwelt-Datenportal

it: EnviDat: il portale dei dati ambientali

fr: EnviDat est le portail de données du WSL; il offre un accès uniformisé et réglementé aux données de surveillance et de recherche en matière d’environnement. Ce portail est capable d’héberger et de publier des ensembles de données précieuses et uniques, qui sont partagées aux quatre coins de la planète. Ce faisant, EnviDat favorise la recherche et contribue à l’avancement des sciences environnementales.

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

de: EnviDat ist das Datenportal der WSL für einen einheitlichen und verwalteten Zugang zu Umweltdaten aus Monitoring- und Forschungsprojekten. Auf dem Portal können Datensätze gehostet und veröffentlicht werden. Durch die weltweite Bereitstellung einzigartiger und wertvoller Datensätze leistet EnviDat einen Beitrag zur Forschung im Bereich der Umweltwissenschaften.

it: EnviDat è il portale dati del WSL che fornisce un accesso unificato e gestito ai dati di monitoraggio ambientale e di ricerca. Il portale ha la capacità di ospitare e pubblicare serie di dati preziosi e unici che vengono condivisi in tutto il mondo. Così facendo, EnviDat promuove la ricerca e contribuisce al progresso della scienza ambientale.

political_level: other

wsl

capacity: public

type: organization

approval_status: approved

key: guid

key: uri

value: Envidat Harvester

en: Stem number


en: long-term-forest-ecosystem-research soil-water-content swiss-forest-lab icp-forests lwf

en: Data Request

en:
Continuous measurement of soil water content at 15, 50 and 80 cm depth (3 replications) with ECH2O EC-5 soil moisture probes (Decagon Incorporation, Pullman, WA, USA).

 Purpose:

Improve the available data for the calibration or validation of the water cycle modells, i.e. the determination of the water flux needed for calculating the leaching fluxes.

icp-forests

display_name: icp-forests

long-term-forest-ecosystem-research

display_name: long-term-forest-ecosystem-research

lwf

display_name: lwf

soil-water-content

display_name: soil-water-content

swiss-forest-lab

display_name: swiss-forest-lab

en: EC-5 soil water content measurement LWF


en: treeline climate-change-impact sdm treemig mountain-forest

en: Data for bioclimatic envelope model

media_type: text/csv

en: This spreadsheet provides the data used to calibrate and evaluate the bioclimatic envelope models (SDMs) for our 16 target tree species. For copyright reasons the geographic coordinates of the points have been removed and only relevant information in the environmental space is provided.

format: CSV

en: Bioclimatic data for TreeMig

media_type: application/zip

en: Bioclimatic input data used for the TreeMig models in Scherrer et al. 2020. Data spans the whole simulation period of 1500 until 2500 and covers three different climate change scenarios.

format: ZIP

en: Bioclimatic predictors used for future projections

en: The seven bioclimatic predictors (mean annual temperature, minimum temperature of the coldest month, temperature of the driest quarter, annual sum of precipitation, sum of precipitation of the driest quarter, slope and topographic position (concave-convex) used for correlative SDMs in Scherrer et al. 2020. Data for climate is available for both current (1981-2010) and future (2020-49, 2045-74,2070-99).

en:
Species range limits are expected to be dramatically altered under future climate change and many species are predicted to shift their distribution upslope to track their suitable conditions (i.e. based on their niche). However, there might be large discrepancies between the speed of the upward shift of the climatic niche and the actual migration velocity of the species, especially in long-lived organisms such as trees. Here, we compared the simulations of the upslope displacement of the bioclimatic envelope of 16 tree species inhabiting temperate mountain forests under ongoing and future climate change obtained by correlative species distribution models (SDMs) to those from a dynamic forest model accounting for dispersal, competition and demography. We then partitioned the discrepancy in upslope migration velocity between the SDMs and the dynamic forest model into different components by manipulating dispersal limitation, interspecific competition and demography.

This dataset contains the calibration and evaluation data used to create the bioclimatic envelope models, the predictors for the future scenarios (raster layers) and the bioclimatic input data used in the dynamic forest models used in the following publication (Scherrer et al. 2020).

Paper Citation:
Scherrer, D., Vitasse, Y., Guisan , A., Wohlgemuth, T., & Lischke, H. (2020). Competition and demography rather than dispersal limitation slow down upward shifts of trees’ upper elevation limits in the Alps. Journal of Ecology, in press.

climate-change-impact

display_name: climate-change-impact

mountain-forest

display_name: mountain-forest

sdm

display_name: sdm

treeline

display_name: treeline

treemig

display_name: treemig

en: Factors slowing down upward shifts of trees’ upper elevation limits


maintainer: Giulia Francesca Azzurra Donati

en: urban-planning ecosystem-services network-analysis ecological-corridors biodiversity circuit-theory

en: Amphibian movement resistance layers and scripts for connectivity modeling - part 1

en: The zipped folder includes the script to aggregate the resistance layers into squared and hexagonal grids. The subfolders “Boundaries”, “Layers”, “Reference_grids”, and “Resistance_from_SDMs” contain files either called by the code or created in the process.The subfolder “Inputs_for_Circuitscape” contains the inputs to run Circuitscape, after doing some subsequent processing steps in QGIS (listed in the R script) with the files created with the script.

en: Amphibian movement resistance layers and scripts for connectivity modelling - part 2

en: The zipped folder includes the script to create and analyse the networks from Circuitscape outputs. The subfolders “Boundaries”, “Layers”, and “Reference_net” contain files either called by the code or created in the process. The subfolder “Outputs_from_Circuitscape” contains the outputs from Circuitscape including node and branch cumulative currents in a network format.

en: This data includes (1) Scripts to aggregate landscape resistance layers into squared and hexagonal grids (i.e., different representations and resolutions), (2) Input resistance layers and focal nodes in .txt format to run in Circuitscape (Python implementation v4.0.5). Circuitscape is a software tool for modeling and analyzing landscape connectivity, which simulates movement of organisms across landscapes by estimating resistance to movement across each point of the landscape. (3) Scripts for the ecological network analysis, and (4) environmental predictors for amphibian whole-life cycle habitats used to describe the local environment for BGI design (i.e. topographic, hydrologic, edaphic, vegetation, land-use derived, movement-ecology related).

biodiversity

display_name: biodiversity

circuit-theory

display_name: circuit-theory

ecological-corridors

display_name: ecological-corridors

ecosystem-services

display_name: ecosystem-services

network-analysis

display_name: network-analysis

urban-planning

display_name: urban-planning

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: Multi-Scale Prioritization framework for Urban Blue-Green Infrastructure Planning to Support Biodiversity: Data & Codes


maintainer: Ana Beatriz Pierri Daunt

en: ecosystem-services planning socio-ecological-system multifunctionality sense-of-place landscape-planning literature-review resilience landscape-services green-infrastructure landscape-ecology decision-making pdfsearch landscape-perception

en: 2. Frequency of additional concepts.

en: 3. Use of any early concept.

en: 5. Planning steps.

en: 1. Frequency of early concepts.

en: 6. Protocol

format: XLS

en: 4. Use of any additional concept.

en:
Table of content: 1. Frequency of early concepts; 2. Frequency of additional concepts; 3. Use of any early concept; 4. Use of any additional concept, 5. Planning steps; 6. Protocol.

The present dataset is part of the published scientific paper entitled “Landscape ecological concepts in planning: review of recent developments” (Hersperger et al., 2021). The goal of this research was to review recent publications to assess the use of landscape ecological concepts in planning. Specifically, we address the following research questions: Q1. Landscape ecological concepts: What are they? How frequently are they mentioned in current research? Q2. How are landscape ecological concepts integrated in landscape planning?

We analysed all empirical and overview papers that have been published in four key academic journals in the field of landscape ecology and landscape planning in the years 2015–2019 (n = 1918). Four key journals in the field of landscape ecology were selected to conduct the analysis, respectively Landscape Ecology (LE), Landscape Online (LO), Current Landscape Ecology Reports (CLER), and Landscape and Urban Planning (LUP). The title, abstract and keywords of all papers were read in order to identify landscape ecological concepts. Then, all 1918 papers went through a keyword search to identify the use of early and additional concepts. We used the “pdfsearch” package in R programming language and searched for singular and plural forms and different variations of the concepts (see Supplementary material 1, Table A). As a result, we provided four outputs:

  1. Frequency of early concepts. This data provides the total number of times each article used each early concept (Q1). This data was used to produce the Figure 2a at the original publication.

  2. Frequency of additional concepts. This data provides the total number of times each article used each additional concept (Q1). This data was used to produce the Figure 2b at the original publication.

  3. Use of any early concept. This data provides the total number of times each article used any early concept (Q1).
This data was used to produce the Figure 3a at the original publication.

  4. Use of any additional concept. This data provides the total number of times each article used any additional concept (Q1). This data was used to produce the Figure 3b at the original publication.

To address the second question (Q2), the title, abstract and keywords of the papers included in our sample (n=1918 articles) were screened to identify papers that might show how landscape ecological concepts are integrated into planning. We selected 52 empirical papers (see Supplementary material – 4 Integration of landscape ecological concepts into planning), and we provided two outputs:

  5. Planning steps. This data provides the number of times landscape ecological concepts were addressed in each
planning steps in 52 empirical papers analysed in detail (Q2). This data was used to produce the Figure 4 at the
original publication.

  6. Protocol for assessing the integration of landscape ecological concepts into planning. To systematically collect the
data, we used this protocol which addressed the following questions: (a) which type of planning is addressed by the
paper? (b) to which planning level does the paper refer to? (c) which concepts are integrated in any of the planning
steps described above?

decision-making

display_name: decision-making

green-infrastructure

display_name: green-infrastructure

landscape-ecology

display_name: landscape-ecology

landscape-perception

display_name: landscape-perception

landscape-planning

display_name: landscape-planning

landscape-services

display_name: landscape-services

literature-review

display_name: literature-review

multifunctionality

display_name: multifunctionality

pdfsearch

display_name: pdfsearch

planning

display_name: planning

resilience

display_name: resilience

sense-of-place

display_name: sense-of-place

socio-ecological-system

display_name: socio-ecological-system

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: The usage of landscape ecological concepts in the planning literature


en:
Sum of stem cross-section areas at a height of 1.3 m (dbh measurement height) of all living and dead trees and shrubs starting at 12 cm dbh recorded according to the NFI1 method. In NFI1 only those dead trees were recorded whose wood could still be exploited.

Citation:
 > _Abegg, M.; Brändli, U.-B.; Cioldi, F.; Fischer, C.; Herold-Bonardi, A.; Huber M.; Keller, M.; Meile, R.; Rösler, E.; Speich, S.; Traub, B.; Vidondo, B. (2014). Fourth national forest inventory - result tables and maps on the Internet for the NFI 2009-2013 (NFI4b). [Published online 06.11.2014] Available from World Wide Web http://www.lfi.ch/resultate/ Birmensdorf, Swiss Federal Research Institute WSL. [doi:10.21258/1057112](https://doi.org/10.21258/1057112)_

accessible-forest-without-shrub-forest

display_name: accessible-forest-without-shrub-forest

altitudinal-vegetation-zone

display_name: altitudinal-vegetation-zone

biogeographical-region

display_name: biogeographical-region

canton

display_name: canton

economic-region

display_name: economic-region

main-tree-species

display_name: main-tree-species

production-region

display_name: production-region

protection-forest-region

display_name: protection-forest-region

en: Total basal area NFI1


maintainer: Elisabeth Hafner

en: satellite snow avalanche validation avalanche-hazard-mapping

en: Satellite Avalanche Mapping Validation data and data description

en: 14 shapefiles to be used only together with the data description also provided as a pdf.

en:
Validation points, validation area, ground truth coverage, SPOT 6 avalanche outlines, Sentinel-1 avalanche outlines, Sentinel-2 avalanche outlines, Davos avalanche mapping (DAvalMap) avalanche outlines as shapefiles and a detailed attribute description (DataDescription_EvalSatMappingMethods.pdf).

Coordinate system: CH1903+_LV95

The generation of this dataset is described in detail in:

Hafner, E. D., Techel, F., Leinss, S., and Bühler, Y.: Mapping avalanches with satellites – evaluation of performance and completeness, The Cryosphere, https://doi.org/10.5194/tc-2020-272, 2021.

avalanche

display_name: avalanche

avalanche-hazard-mapping

display_name: avalanche-hazard-mapping

satellite

display_name: satellite

snow

display_name: snow

validation

display_name: validation

en: Satellite avalanche mapping validation data


aerosol-data-weissfluhjoch

maintainer: EnviDat Support

title_for_slug: aerosol-data-weissfluhjoch

en: raclets inp aerosol ice-nucleation linda particles

en: OPC-GT526S Dataset Weissfluhjoch

en: Particle counts were recorded in six size channels (0.3, 0.5, 0.8, 1.5, 2.5 and 5 μm) in a resolution of 20 seconds (time in UTC) by a particle counter (GT-526S, Met One Instruments, Inc.).

mimetype: text/csv

en: APS Dataset Weissfluhjoch

en: The APS file contains aerosol data (total number concentration, median, mean, geometric mean, mode and geometric standard deviation of the size distribution) for aerodynamic diameters between 0.5 μm and ~20 μm as well as instrument characteristics, in a temporal resolution of 20 seconds, with time in UTC, measured at Weissfluhjoch.

mimetype: application/x-netcdf

en: LINDA Dataset Weissfluhjoch

en: The LINDA file contains information on temperature (in °C) dependent frozen fractions, number of Ice Nuleating Particles (INP, per standard liter) and differential INP concentrations (per standard liter and Kelvin).

en: SMPS Dataset Weissfluhjoch

en: The SMPS file contains aerosol data (particle concentration, total number concentration, median, mean, geometric mean, mode and geometric standard deviation of the size distribution) in a size range between 12 and 460 nm (electrical mobility diameter) as well as instrument characteristics (sample temperature, pressure, relative humidity, mean free path and gas viscosity) in a temporal resolution of 2 minutes, with time in UTC, measured at Weissfluhjoch.

en: OPC-N3 Dataset Weissfluhjoch

en: Particle concentrations in a size range of 0.35 μm to 40 μm were measured with an OPC-N3 (Alphasense, Inc.) in a resolution of 20 seconds (time in UTC). PM₁, PM₂,₅ and PM₁₀ were directly derived.

en:
Aerosol properties were measured between February 8 and March 31 2019 at the measurement site Weissfluhjoch (LON: 9.806475, LAT: 46.832964). Optical and aerodynamic particle counters, as well as a scanning mobility particle size spectrometer and an ice nuclei counter were deployed to report particle concentrations and size distributions in fine (10-1000 nm) and coarse mode (> 1000 nm), cloud condensation nuclei concentrations (CCNCs), and ice nuclei particle concentrations (ICNCs). The ambient particles were transported via a heated inlet to be distributed to the particle detecting devices inside the setup room.

Optical Particle Counter (OPC): Light scattering of a diode laser beam caused by travelling particles is used in the both, the OPC-N3 (0.41 - 38.5 μm) and GT-526S (0.3 – 5 μm), to determine their size and number concentration. For the OPC-N3, particle size spectra and concentration data are used afterwards to calculate PM₁, PM₂,₅ and PM₁₀ (assumptions: particle density: 1.65 g cmˉ³, refractive index: 1.5+i0).

Aerodynamic Particle Sizer (APS): The APS (3321, TSI Inc.) measured the particle size distribution for aerodynamic diameters between 0.5 μm and ~20 μm by the particle’s time-of-flight and light-scattering intensity (assumptions: particle density 1 g cmˉ³).

Scanning Mobility Particle Size Spectrometer (SMPS): Particle number concentrations in a size range between 12 and 460 nm (electrical mobility diameter) were measured at Davos Wolfgang, using a Scanning Mobility Particle Sizer Spectrometer (SMPS 3938, TSI Inc.). The classifier (3082, TSI Inc.) was equipped with a neutralizer (3088, TSI Inc.) and a differential mobility analyzer working with negative polarity (3081, TSI Inc.). The size selected particles were counted by a water-based condensation particle counter (3787 TSI Inc.). The TSI AIM software was used to provide particle size distributions by applying multiple charge and diffusion loss corrections (assumptions: particle density 1 g cmˉ³).

Coriolis μ and LINDA: A microbial air sampler (Coriolis μ, bertin Instruments) was used to collect airborne particles for investigating their ice nucleating ability with a droplet freezing device. Particles larger than 0.5 μm were drawn with an air flow rate of up to 300 l min‾¹ into the cone and centrifuged into the wall of the cone due to the forming vortex. The liquid sample was transferred into the LED based Ice Nucleation Detection Apparatus (LINDA, University of Basel) to study heterogeneous ice formation (immersion freezing mode) of ambient airborne particles.

aerosol

display_name: aerosol

ice-nucleation

display_name: ice-nucleation

inp

display_name: inp

linda

display_name: linda

particles

display_name: particles

raclets

display_name: raclets

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: Aerosol Data Weissfluhjoch


en: ambient-air-quality ozone icp-forests swiss-forest-lab long-term-forest-ecosystem-research

en: Data Request

en:
Measuring air pollutants in forests is important for evaluating the risk for vegetation in areas not covered by conventional air quality monitoring networks. Ozone measurements are carried out at LWF, applying the harmonized methodologies from UNECE/ICP Forests and running under the 1999 Gothenburg Protocol to Abate Acidification, Eutrophication and Ground-level Ozone. Data are also collected on ozone-induced visible symptoms and other ecosystem properties such as tree growth, nutrition, and biodiversity, as well as climate. This makes this long-term monitoring data series essential for impact assessment and air pollution modelling.

 Purpose:

Ozone risk assessment: Measurements of mean ozone concentrations with passive samplers (passam ag).

 Manual Citation:

 * Schaub M, Calatayud V, Ferretti M, Brunialti G, Lövblad G, Krause G, Sanz MJ, 2016: Part XV: Monitoring of Air Quality. In: UNECE ICP Forests Programme Co-ordinating Centre (ed.): Manual on methods and criteria for harmonized sampling, assessment, monitoring and analysis of the effects of air pollution on forests. Thünen Institute of Forest Ecosystems, Eberswalde, Germany, 11 p. + Annex [http://icp-forests.net/page/icp-forests-manual](http://icp-forests.net/page/icp-forests-manual)

 Paper Citation:

 * Schaub M, Häni M, Calatayud V, Ferretti M, Gottardini E (2018) ICP Forests Brief No 3 - Ozone concentrations are decreasing but exposure remains high in European forests. Programme Co-ordinating Centre of ICP Forests, Thu¨nen Institute of Forest Ecosystems. [doi: 10.3220/ICP1525258743000](https://icp-forests.org/pdf/ICPForestsBriefNo2.pdf)

 * Cailleret M, Ferretti M, Gessler A, Rigling A, Schaub M (2018) Ozone effects on European forest growth – towards an integrative approach. Journal of Ecology. [doi:10.1111/1365-2745.12941](http://doi.org/10.1111/1365-2745.12941)

 * Calatayud V, Diéguez JJ, Sicard P, Schaub M, De Marco A (2016) Testing approaches for calculating stomatal ozone fluxes from passive sampler. Science of the Total Environment. [doi:10.1016/j.scitotenv.2016.07.155](http://doi.org/10.1016/j.scitotenv.2016.07.155)

 * Calatayud V and Schaub M (2013) Methods for Measuring Gaseous Air Pollutants in Forests. In: Marco Ferretti and Richard Fischer (Eds). Forest Monitoring: Methods for Terrestrial Investigations in Europe with an Overview of North America and Asia, Vol 12, DENS, UK: Elsevier, 2013, pp. 375-384. [doi:10.1016/B978-0-08-098222-9.00019-4](http://doi.org/10.1016/B978-0-08-098222-9.00019-4)

ambient-air-quality

display_name: ambient-air-quality

icp-forests

display_name: icp-forests

long-term-forest-ecosystem-research

display_name: long-term-forest-ecosystem-research

ozone

display_name: ozone

swiss-forest-lab

display_name: swiss-forest-lab

envidat

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Passive sampling of O3 LWF


espon-digiplan

title_for_slug: espon-digiplan

en: spatial-planning transparency efficiency innovation digitalisation geoportal

en: Germany 2020 all transcripts Digiplan Task 2

en: All transcripts are written in German.

en: Questionnaire Digiplan Task 2 CH_D

en: This document contains the questionnaire, which was used for the expert interviews in the context of Digiplan Task 2. The questionnaire was adapted to the context of the country or the to the context of the interviewee in some interviews. Therefore, some additional questions were asked or some questions were skipped.

en: Switzerland 2020 all transcripts Digiplan Task 2

en: Metadata of the written transcripts

en: Additional information (position of expert, date of the interviews) on the transcripts can be found in this document.

en: The dataset as a part of the international project ESPON Digiplan. The aim of this international project is to assess the extent, organisation and financing of digitisation of plan data as well as the use of these data in ESPON member countries. As a part of the in-depth case study, 7 virtual expert interviews in Switzerland and 5 virtual expert interviews in Germany were conducted with experts on the topic of digitisation of plan data. The documents contain the transcripts of the interviews. The transcripts aim to capture the content of the interviews, which is why voice raising and lowering, as well as pauses in the interview, were not specifically recorded. The interviews were conducted in German, therefore the transcripts are also in German.

digitalisation

display_name: digitalisation

efficiency

display_name: efficiency

geoportal

display_name: geoportal

innovation

display_name: innovation

spatial-planning

display_name: spatial-planning

transparency

display_name: transparency

en: ESPON Digiplan


en: peat sphagnum raised-bog vegetation indicator-values nature-conservation restoration switzerland

en: Data Hagenmoos

en: The data file contains mean indicator values for light, moisture, pH, nutrients, humus, temperature and continentality and strategy values for stress, competition and ruderality for each plot and year. It further contains for each plot and year species richenss values for the following groups: (1) all plant species, (2) all vascular plant species, (3) bog specialists among vascular plant species, (4) all bryophyte species, (5) bog specialists among bryophyte species. As bog specialist species, we considered all plant species listed as characteristic species of raised bogs by Feldmeyer-Christe and Küchler (2018: Moore der Schweiz. Haupt, Bern).

en: This dataset includes data from three vegetation surveys in a restored raised bog (Hagenmoos) in the lowland of the canton of Zürich (Switzerland). The bog Hagenmoos was restored by cutting shrubs and trees within the formerly peat-cutting pits and by blocking drainages. The vegetation surveys were carried out before (1989), ten years after (1999) and 30 years after restoration (2020). In each vegetation survey, all vascular plant and bryophyte species within 72 permanent plots were recorded. Of these plots, 34 are located within the formerly peat-cutting pits and 38 are located outside the peat pits. Based on presence-absence data of vascular plants and bryophytes, mean ecological indicator and strategy values based on Landolt et al. (2010) were calculated and are provided in the Excel sheet. Indicator values for light, moisture, pH, nutrients, humus, temperature and continentality and strategy values for stress, competition and ruderality were considered. Furthermore, species richness for the following groups were calculated: (1) all plant species, (2) all vascular plant species, (3) bog specialists among vascular plant species, (4) all bryophyte species, (5) bog specialists among bryophyte species. As bog specialist species, we considered all plant species listed as characteristic species of raised bogs by Feldmeyer-Christe and Küchler (2018: Moore der Schweiz. Haupt, Bern).

indicator-values

display_name: indicator-values

nature-conservation

display_name: nature-conservation

peat

display_name: peat

raised-bog

display_name: raised-bog

restoration

display_name: restoration

sphagnum

display_name: sphagnum

switzerland

display_name: switzerland

vegetation

display_name: vegetation

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: Restoration of the lowland raised bog Hagenmoos (Switzerland): Data on vegetation, ecological indicator values and species richness from 1989 until 2020


maintainer: Esther Frei

en: long-term-experiment treeline-ecosystems stillberg mountain-ecology literature-review

en: The Stillberg bibliography (Stillberg_bibliography_v1.zip) comprises a comprehensive list of 276 scientific publications, 91 of them published in peer-reviewed ISI journals (Stillberg_bibliography_data_v1.csv) along with the metadata file (Stillberg_bibliography_metadata_v1.csv). Currently the bibliography comprises literature about the main afforestation experiment, the FACE × warming experiment, the nutrient addition experiment, and the G-TREE experiment, as well as further publications related to the Stillberg research site that have been published until August 2023. The bibliography can be filtered for different categories, e.g., experiment, peer-review, source repository or database, and source title.

en:
 Background information

The Stillberg ecological treeline research site in the Swiss Alps was established in 1975, with the aim to develop ecologically, technically, and economically sustainable reforestation techniques at the treeline to reduce the risk of snow avalanches. In the course of time, additional research aspects gained importance, such as the ecology of the treeline ecotone under global change. Over almost fifty years, research at the Stillberg site combined long-term monitoring of the large-scale high-elevation afforestation with experimental manipulations simulating global change impacts. Besides providing a scientific basis and practical guidelines for high-elevation afforestation, this research has contributed to a comprehensive understanding of ecological processes in the treeline ecotone across different compartments and scales, from individual trees, non-tree vegetation and soils to whole ecosystems, in the context of global change resulting in more than 150 publications.

 Dataset generation

We compiled a comprehensive list of scientific publications covering research at the Stillberg research site by conducting searches in the literature databases Web of Science and Google Scholar, as well as in the Digital Object Repository of the Swiss Federal Institute for Forest, Snow and Landscape Research WSL (DORA). We compiled all publications about the afforestation experiment, the FACE × warming experiment, the nutrient addition experiment, the G-TREE experiment, as well as other studies related to the Stillberg research site.

 Data description

The Stillberg bibliography (Stillberg_bibliography_data_v1.csv) comprises a comprehensive list of 276 scientific publications, 91 of them published in peer-reviewed ISI journals. Currently the bibliography comprises literature about the main afforestation experiment, the FACE × warming experiment, the nutrient addition experiment, and the G-TREE experiment, as well as further publications related to the Stillberg research site that have been published until August 2023. The bibliography can be filtered for different categories, e.g., experiment, peer-review, source repository or database, and source title. The bibliography is described in a metadata file (Stillberg_bibliography_metadata_v1.csv). The bibliography along with the metadata file are provided in a ZIP-folder (Stillberg_bibliography_v1.zip).

literature-review

display_name: literature-review

long-term-experiment

display_name: long-term-experiment

mountain-ecology

display_name: mountain-ecology

stillberg

display_name: stillberg

treeline-ecosystems

display_name: treeline-ecosystems

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Bibliography of the long-term treeline research site Stillberg, Switzerland


en: swiss-forest-lab lignin carbon icp-forests long-term-forest-ecosystem-research nitrogen deadwood

en: Data Request

en:
Sampling of deadwood for density and chemical analysis during summer 2009

 Purpose:

Determination of N and C pools of deadwood

 Paper Citation:

 * WEGGLER, K.; DOBBERTIN, M.; JÜNGLING, E.; KAUFMANN, E.; THÜRIG, E., 2012. Dead wood volume to dead wood carbon: the issue of conversion factors. European Journal of Forest Research 131, 1423-1438.

carbon

display_name: carbon

deadwood

display_name: deadwood

icp-forests

display_name: icp-forests

lignin

display_name: lignin

long-term-forest-ecosystem-research

display_name: long-term-forest-ecosystem-research

nitrogen

display_name: nitrogen

swiss-forest-lab

display_name: swiss-forest-lab

en: Deadwood sampling at Sanasilva and LWF sites


maintainer: Matthias Haeni

en: long-term meteo temperature wind-speed swiss-forest-lab precipitation par meteorology climate-change relative-humidity

en: Field station data (ISF)

en: Data file.

en: Site photo of the forest station (ISB)

en: Site photo of the forest station from below (viewing upwards the slope).

mimetype: image/jpeg

en: Site aerial photo (Isone)

en: Site aerial photo from both Isone stations. Source: Google. 2016. Site aerial photo from both Isone stations. Retrieved November 11, 2016, from https://www.google.ch/maps

en: Data plot of the forest station (ISB)

media_type: application/pdf

en: Data overview for air temperature, relative humidity, precipitation, PAR, wind speed.

format: PDF

mimetype: application/pdf

en: Site photo of the field station (ISF)

en: Site photo of the field station from the side.

en: Forest station data (ISB)

en: Data plot of the field station (ISF)

en: High quality meteorological data are needed for long-term forest ecosystem research, particularly in the light of global change. The long-term data series published here comprises almost 20 years of measurements for two meteorological stations in Isone in Switzerland where one station is located within a natural broad-leaved forest stand (ISB) with European beech (_Fagus sylvatica_; 70-100 yrs) as dominant tree species. A second station is situated in the very vicinity outside of the forest (field station, ISF). The meteorological time series are presented in hourly time resolution of air temperature, relative humidity, precipitation, photosynthetically active radiation (PAR) and wind speed. Isone is part of the Long-term Forest Ecosystem Research Programme (LWF) established and maintained by the Swiss Federal Research Institute WSL.

climate-change

display_name: climate-change

long-term

display_name: long-term

meteo

display_name: meteo

meteorology

display_name: meteorology

par

display_name: par

precipitation

display_name: precipitation

relative-humidity

display_name: relative-humidity

temperature

display_name: temperature

wind-speed

display_name: wind-speed

en: Isone, Switzerland: Long-term forest meteorological data from the Long-term Forest Ecosystem Research Programme (LWF), from 1997 onwards


en: snowpack avalanche snow snow-stability-evaluation avalanche-forecast

en: Manually observed snow profiles

en: Manually observed snow profiles as csv-files containing depth [cm], thickness [cm], density [kg m-3], hand hardness, first grain type, second grain type, first grain size [mm], and second grain size [mm] of each layer.

mimetype: application/zip

en: README

media_type: text/plain

en: README file explaining data structure and content

format: TXT

mimetype: text/plain

en: Stability tests

en: Stability tests including csv-files with CT, ECT and PST experiments for each year and each field site.

en: Extracted data

en: Extracted data contain validation and results published in Richter et al. (2019).

en: SNOWPACK simulations

en: This dataset contains all SNOWPACK simulations, including input files, setup and output files.

en:
To validate the critical crack length as implemented in the snow cover model SNOWPACK, PST experiments were conducted for three winter seasons (2015-2017) at two field site above Davos, Switzerland. This dataset contains manually observed snow profiles and stability tests. Furthermore, corresponding SNOWPACK simulations are included.
These data were analyzed and results were published in Richter et al. (2019).

Please refer to the Readme file for further details on the data.

These data are the basis of the following publication:
Richter, B., Schweizer, J., Rotach, M. W., and van Herwijnen, A.: Validating modeled critical crack length for crack propagation in the snow cover model SNOWPACK, The Cryosphere, 13, 3353–3366, https://doi.org/10.5194/tc-13-3353-2019, 2019.

avalanche

display_name: avalanche

avalanche-forecast

display_name: avalanche-forecast

snow

display_name: snow

snow-stability-evaluation

display_name: snow-stability-evaluation

snowpack

display_name: snowpack

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Validating and improving the critical crack length in SNOWPACK


maintainer: Océane Hames

en: openfoam snow-deposition mosaic snow-transport arctic-sea-ice

en: snowBedFoam 1.0.

en:
OpenFOAM-2.3.0. scripts containing the implemented Eulerian-Lagrangian snow transport model.

The code file provided here is not updated. The most recent version of the script can be found on the WSL/SLF GitLab repository: https://gitlabext.wsl.ch/atmospheric-models/snowbedfoam-v1-0.git

en: Paper Draft

en: This is the initial draft of the paper where the snowBedFoam 1.0. results are tested against Terrestrial Laser Scan (TLS) measurements of snow dynamics on Arctic sea ice (MOSAiC expedition). It highlights the numerical limitations of our model as well as the measurement uncertainties, which may occur in such extreme environments.

en: MOSAiC Met City preliminary (Level 2) wind data

en:
Extract from the preliminary MOSAiC atmospheric data (Level 2) for the time period 6th to 13th of November, 2019.
This data was used to set up the fluid forcing parameters in the snowBedFoam simulations on MOSAiC sea ice. It is being published in this repository with the kind permission from Matthew Shupe and his team.
The final processed and quality controlled version of this dataset (Level 3) has not been published yet. A complete reference will be added in this description once it is released.

en:
snowBedFoam 1.0. is a snow transport solver implemented in the Computational Fluid Dynamics (CFD) software OpenFOAM. It is adapted from the standard multi-phase flow solver DPMFoam for application in snow-influenced environments.

To simulate aeolian snow transport, snowBedFoam 1.0. handles coupled Eulerian–Lagrangian phases, which involve a finite number of particles (snow) spread in a continuous phase (air). The snow erosion and deposition are modelled through physically-based equations such as the ones employed in the well-established LES-Lagrangian Stochastic Model (Comola and Lehning, 2017 ; Sharma et al., 2018). This modelling approach is computationally intensive and thus adapted to simulate snow movement and distribution on small scale terrain.

snowBedFoam 1.0. was tested against topographical data collected on Arctic sea ice during the MOSAiC expedition (Clemens-Sewall, 2021) . Together with atmospheric data from the MOSAiC Met City (Shupe et al., 2021) used for the fluid forcing, the model was able to accurately simulate the zones of erosion and deposition of snow along a complex ice ridge structure.

The core code of snowBedFoam 1.0. is also accessible on the WSL/SLF GitLab repository (more details in the Resources section).

arctic-sea-ice

display_name: arctic-sea-ice

mosaic

display_name: mosaic

openfoam

display_name: openfoam

snow-deposition

display_name: snow-deposition

snow-transport

display_name: snow-transport

en: snowBedFoam: an OpenFOAM Eulerian-Lagrangian solver for modelling snow transport


en: soil-moisture low-flow precipitation prevah drought-2018 discharge hydrological-simulations

en: Low-flow storage

en: Simulated low-flow storage for the 307 medium-sized catchments. The first column provides the date in the format YYYYMMDD. One column corresponds to one catchment. Unit: mm.

en: Precipitation

en: Simulated precipitation for the 307 medium-sized catchments. The first column provides the date in the format YYYYMMDD. One column corresponds to one catchment. Unit: mm/d.

en: Discharge

en: Simulated discharge for the 307 medium-sized catchments. The first column provides the date in the format YYYYMMDD. One column corresponds to one catchment. Unit: mm/d.

en: Shapefile of 307 catchments in Switzerland

en: Shapefile of 307 catchments for which simulations of precipitation, discharge, soil moisture, and low flow are provided. The OBJECTID entry corresponds to the data columns in the textfiles of the simulated data provided.

en: Soil moisture

en: Simulated plant-available soil moisture for the 307 medium-sized catchments. The first column provides the date in the format YYYYMMDD. One column corresponds to one catchment. Unit: mm.

en: The dataset provides simulated 1) precipitation, 2) discharge, 3) soil moisture, and 4) low-flow simulations for 307 medium-sized catchments in Switzerland for the period 1981-2018. The data were simulated using the hydrological model PREVAH in its gridded-version. The simulated time series are provided at daily resolution. A detailed description of the modeling approach can be found in Brunner et al. 2019 submitted to NHESS.

discharge

display_name: discharge

hydrological-simulations

display_name: hydrological-simulations

low-flow

display_name: low-flow

prevah

display_name: prevah

soil-moisture

display_name: soil-moisture

en: Hydro-meteorological simulations for the period 1981-2018 for Switzerland


lwf-schanis-long-term-research-site

title_for_slug: lwf-schanis-long-term-research-site

en: infrastructure lwf forest meteorological-data plot meteorological-measurements swiss-forest-lab

en: LWF plot Schänis. Photo: Anne Thimonier Rickenmann, 2019

en: Schänis Meteorological Data LWF

en:
![alt text](https://www.envidat.ch/dataset/b21e7c90-7d1f-4940-82ab-d29c0dcf5fcf/resource/5b41f2a1-847f-4a0f-aa48-cd530ace3827/download/lwf_schaenis.jpg "LWF Schänis")

LWF Plot Schänis

- Community: Schänis / canton SG
- Date of installation: 17 September 1997
- Size of the plot: 2 ha
- Altitude: 693-773 m
- Mean slope: 60%
- Geology (in German): Tertiär. Subalpine Molasse, Oligocaen, Chattien, Kalknagelfluh
- Soil types (WSL) : n.d.
- Woodland association after EK72: 13: Cardamino-Fagetum tilietosum
- Main tree species: Fagus sylvatica
- Management system: high forest
- Silvicultural system: group selection
- Top-height diameter (quadratic average diameter of the 100 thickest trees per ha): 55.8 cm
- Number of trees BHD >= 12 cm (2011): 611
- Maximum tree age: Abies alba130-150 yr - Fraxinus excelsior 130-150 yr - Fagus sylvatica 130-150 yr

More Information: https://www.wsl.ch/en/forest/forest-development-and-monitoring/long-term-forest-ecosystem-research-lwf/sites/schaenis.html

forest

display_name: forest

infrastructure

display_name: infrastructure

lwf

display_name: lwf

meteorological-data

display_name: meteorological-data

meteorological-measurements

display_name: meteorological-measurements

plot

display_name: plot

swiss-forest-lab

display_name: swiss-forest-lab

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: LWF Schänis long-term research site


en: cordex downscaling toposcale cryosphere rcm

en: Github link to TopoCLIM project

en: TopoCLIM v1.0

en: Archive of Github repository as of 10 June 2021 including license and documentation and examples.

en:
Model code and documentation for the downscaling model TopoCLIM which provides methods to downscale climate timeseries from CORDEX RCM data. This scheme specifically addresses the need for hillslope scale atmospheric forcing timeseries for modeling the local impact of regional climate change projections on the land surface in complex terrain. The method has a global scope and is able to generate the full suite of model forcing variables required for hydrological and land surface modeling at hourly timesteps.

A working example is provided in this code archive but for full running of the scheme TopoSCALE is required https://doi.org/10.5194/gmd-7-387-2014 with code available at https://github.com/joelfiddes/tscaleV2. Standard library dependencies are given in the python requirements.txt of the archive with installation instructions in the README.md.

License GPL v.3

cordex

display_name: cordex

cryosphere

display_name: cryosphere

downscaling

display_name: downscaling

rcm

display_name: rcm

toposcale

display_name: toposcale

en: TopoCLIM v1.0 code


en: mountain-stream surrogate-measurement river sediment-transport bedload-transport torrent

en: SPG field calibration data

en:
SPG field calibration data from the Erlenbach (since 2009), the Albula (2018), the Navisence (2019) and the Avançon de Nant (2019-2020) monitoring stations. Data used in following papers:
"Toward a General Calibration of the Swiss Plate Geophone System for Fractional Bedload Transport" submitted to Earth Surface Dynamics on the 14th of January 2022.
"Improving the Calibration of Impact Plate Bedload Monitoring Systems by Filtering Out Acoustic Signals from Extraneous Particle Impacts" submitted to Earth and Space Science on the 13th of August 2021.

en: Data used in paper: Rickenmann, D., 2020. Effect of Sediment Supply on Cyclic Fluctuations of the Disequilibrium Ratio and Threshold Transport Discharge, Inferred from Bedload Transport Measurements over 27 Years at the Swiss Erlenbach stream. Water Resources Research, 56, e2020WR027741. https://doi.org/10.1029/2020WR027741

en: Data used in paper: Antoniazza, G., Dietze, M., Mancini, D., Turowski, J.M., Rickenmann, D., Nicollier, T., Boss, S., Lane, S.N. (2023). Anatomy of an Alpine bedload transport event: A watershed-scale seismic-network perspective. Journal of Geophysical Research: Earth Surface, 128, e2022JF007000. https://doi.org/10.1029/2022JF007000

en: SPG flume experiment data

en:
SPG data from controlled flume experiments conducted at the Obernach outdoor flume facility (TU Munich) between 2018 and 2020. Data used in following papers:
"Toward a General Calibration of the Swiss Plate Geophone System for Fractional Bedload Transport" submitted to Earth Surface Dynamics on the 14th of January 2022.
"Improving the Calibration of Impact Plate Bedload Monitoring Systems by Filtering Out Acoustic Signals from Extraneous Particle Impacts" submitted to Earth and Space Science on the 13th of August 2021.

en: Data used in paper: Rickenmann, D., Ammann, L., Nicollier, T., Boss, S., Fritschi, B., Antoniazza, G., Steeb, N., Chen, Z., Wyss, C., Badoux, A. (2022). Comparison of calibration characteristics of different acoustic impact systems for measuring bedload transport in mountain streams. Earth Surface Dynamics Discussions, https://doi.org/10.5194/esurf-2022-7

en: Hydrological drivers of bedload transport in Avançon de Nant

en: Data used in paper: Antoniazza, G., Nicollier, T., Boss, S., Mettra, F., Badoux, A., Schaefli, B., Rickenmann, D., Lane, S.N., 2022. Hydrological Drivers of Bedload Transport in an Alpine Watershed. Water Resources Research, 58, e2021WR030663. https://doi.org/10.1029/2021WR030663

en: Data-variability-SPG-response

en: Data used in paper: Antoniazza, G., Nicollier, T., Wyss, C.R., Boss, S., Rickenmann, D., 2020. Bedload Transport Monitoring in Alpine Rivers: Variability in Swiss Plate Geophone Response. Sensors 2020, 20, 4089; doi:10.3390/s20154089

en:
The Swiss Federal Research Institute WSL has extensive experience with surrogate bedload transport measurements. The first measuring site was established in the Erlenbach stream, a small (first-order) catchment in the pre-alpine valley Alptal in central Switzerland. Continuous bedload transport measurements were started in 1986, using first piezoelectric sensors (1986 to 1999) and then geophone sensors (from 2002 onwards) underneath a steel plate and mounted flush with the streambed. In the meantime, the so-called Swiss plate geophone (SPG) system has been installed at more than 20 field sites, primarily in smaller and steeper streams in Switzerland, Austria, and Italy but also in a few larger rivers and in some other streams worldwide (Israel, USA, Japan).
Sediment transport observations in Switzerland with the SPG system concern the following streams: Erlenbach near Brunni (Alptal valley), Albula at Tiefencastel, Navisence at Zinal, Avançon de Nant near Pont de Nant (see map). The data in this repository primarily refer to calibration measurements with the SPG system. The publications listed here discuss primarily the performance of the measuring system but also process-based aspects of bedload transport.

bedload-transport

display_name: bedload-transport

mountain-stream

display_name: mountain-stream

river

display_name: river

sediment-transport

display_name: sediment-transport

surrogate-measurement

display_name: surrogate-measurement

torrent

display_name: torrent

en: Sediment transport observations in Swiss mountain streams


maintainer: Yohann Chauvier

en: species-observations conservation r-package synonyms landsca filtering gbif large-scale accepted-name occurrence-records species-distribution taxonomy hard-limit range-maps flags ecoregions

en: gbif.range R package version 1.1 (current)

en: wsl.gbif R package version 0.1 (deprecated)

en: Test version, not to be used.

en: GitHub URL

en: gbif.range R package version 0.2 (deprecated)

en: Although species range may be obtained using expert maps or modeling methods, expert data is often species-limited and statistical models need more technical expertise as well as many species observations. When unavailable, such information may be extracted from the Global Biodiversity Information facility (GBIF), the largest public data repository inventorying georeferenced species observations worldwide. However, retrieving GBIF records at large scale may be tedious if users are unaware of specific tools and functions that need to be employed. Here we present *gbif.range*, an R library that contains automated methods to generate species range maps from scratch using in-house ecoregions shapefiles and an easy-to-use GBIF download wrapper. Finally, this library also offers a set of additional very useful parameters and functions for large GBIF datasets (generate doi, extract GBIF taxonomy, records filtering...). [gbif.range R project](https://github.com/8Ginette8/gbif.range)

accepted-name

display_name: accepted-name

conservation

display_name: conservation

ecoregions

display_name: ecoregions

filtering

display_name: filtering

flags

display_name: flags

gbif

display_name: gbif

hard-limit

display_name: hard-limit

landsca

display_name: landsca

large-scale

display_name: large-scale

occurrence-records

display_name: occurrence-records

r-package

display_name: r-package

range-maps

display_name: range-maps

species-distribution

display_name: species-distribution

species-observations

display_name: species-observations

synonyms

display_name: synonyms

taxonomy

display_name: taxonomy

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: gbif.range - An R package to generate species range maps based on ecoregions and a user-friendly GBIF wrapper


length-of-forest-edge

title_for_slug: length-of-forest-edge

en:
Length of the forest edge calculated on the basis of the forest boundary lines determined in the aerial photo.

Citation:
 > _Abegg, M.; Brändli, U.-B.; Cioldi, F.; Fischer, C.; Herold-Bonardi, A.; Huber M.; Keller, M.; Meile, R.; Rösler, E.; Speich, S.; Traub, B.; Vidondo, B. (2014). Fourth national forest inventory - result tables and maps on the Internet for the NFI 2009-2013 (NFI4b). [Published online 06.11.2014] Available from World Wide Web http://www.lfi.ch/resultate/ Birmensdorf, Swiss Federal Research Institute WSL. [doi:10.21258/1057112](https://doi.org/10.21258/1057112)_

altitudinal-vegetation-zone

display_name: altitudinal-vegetation-zone

biogeographical-region

display_name: biogeographical-region

canton

display_name: canton

economic-region

display_name: economic-region

length-of-forest-edge

display_name: length-of-forest-edge

lower-higher-altitudinal-zones

display_name: lower-higher-altitudinal-zones

production-region

display_name: production-region

protection-forest-region

display_name: protection-forest-region

total-area

display_name: total-area

en: Length of forest edge


maintainer: Lyu

en: pinales fagales species-range-map species-occurrence species-richness species-distribution-model

en: Species range maps of species in Fagales and Pinales (with enough occurrences)

en: species_map.zip includes species 1690 range maps generated based on the integrated method described in Lyu et al., (2022). File names with (polygon) indicate that this map is only generated by polygon mapping, as there are not enough occurrences for SDMs.

en: Occurrence maps for species of Fagales and Pinales with few records

en: Point_buffer.zip includes 267 occurrence maps of species that do not have enough occurrence data for polygon mapping.

en:
This database contains 1957 distribution maps of species from Fagales and Pinales constructed based on a method integrating polygon mapping and SDMs (Lyu et al., 2022).
To construct the maps, we first collected occurrence data from 48 different sources. According to the number of occurrences after data cleaning, three kinds of maps are constructed: (1) For species with more than 20 occurrences, we performed SDM and polygon mapping described in Lyu et al. (2022) and select the integration of the two layers as the distribution range; (2) For species with more than 4 but less than 20 occurrences, we only use polygon mapping to draw the distribution range; (3) For species with less than 4 occurrences, a 20-km buffer was generated around the occurrences as the distribution range. The maps were manually checked and evaluated (see Note S3 and Table S9 in Lyu et al., 2022 for details).

fagales

display_name: fagales

pinales

display_name: pinales

species-distribution-model

display_name: species-distribution-model

species-occurrence

display_name: species-occurrence

species-range-map

display_name: species-range-map

species-richness

display_name: species-richness

en: Species distribution maps of Fagales and Pinales (GDPlants)


irkis-soil-moisture-measurements-davos

maintainer: Nander Wever

title_for_slug: irkis-soil-moisture-measurements-davos

en: dischma-catchment meteo-station davos soil-moisture meteorological-measurements

en: IRKIS soil moisture data (zip file)

en: Compressed archive (zip) containing soil moisture measurements, as well as meteorological measurements and interpolated meteorological time series.

en:
Meteorological and soil moisture measurements from soil moisture stations installed from October 2010 - October 2013 in the area surrounding Davos, in particular in the Dischma catchment.

There are in total 7 stations: 1202, 1203, 1204, 1205, 222, 333 and SLF2. For each of the stations, there is a:

* vwc_[stn].smet: containing the soil moisture measurements

* station_[stn].smet: in-situ measured meteorlogical parameters. Note, the quality of these measurements for stations 1202, 1203, 1204 and 1205 is very low, with data gaps. Use this data with care. For stations 222, 333 and SLF2, data quality is high and only the default cautiousness should be applied.

* interpolatedmeteo_[stn].smet contains per stations a dataset derived by interpolating from several stations in the Davos area to the stations location. This dataset was generated from the output of the Alpine3D model, of which simulations are presented in the Wever et al. (2017) manuscript.

At the soil moisture measurement sites, Decagon 10HS sensors were installed, at 10, 30, 50, 80 and 120 cm depth. Per depth 2 sensors were installed, labelled A and B in the datafiles. Note that at stations 1203, 1204 and 1205, sensors were only installed at 10, 30 and 50 cm depth.

The files follow the SMET format: https://models.slf.ch/docserver/meteoio/SMET_specifications.pdf and metadata for the stations can be found in the header of the smet files.

Please cite the Wever et al. (2017) reference when using this data in publications.

For a more detailed description, please refer to: Wever, N., Comola, F., Bavay, M., and Lehning, M.: Simulating the influence of snow surface processes on soil moisture dynamics and streamflow generation in an alpine catchment, Hydrol. Earth Syst. Sci., 21, 4053-4071, https://doi.org/10.5194/hess-21-4053-2017, 2017.

davos

display_name: davos

dischma-catchment

display_name: dischma-catchment

meteo-station

display_name: meteo-station

meteorological-measurements

display_name: meteorological-measurements

soil-moisture

display_name: soil-moisture

en: IRKIS Soil moisture measurements Davos


en: gcos snow-water-equivalent snow-profile snow snow-height

en: STATION METADATA

en: DATA ACCESS

en: Snowprofile from 11 observer sites in Switzerland compiled for the Global Climate Observing System (GCOS). Height of snow (cm) and snow water equivalent (mm) are recorded every 2 weeks since the 1947 (depending on station). Attached metadata file gives details of each station.

gcos

display_name: gcos

snow

display_name: snow

snow-height

display_name: snow-height

snow-profile

display_name: snow-profile

snow-water-equivalent

display_name: snow-water-equivalent

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: GCOS SWE data from 11 stations in Switzerland


maintainer: Henning Löwe

en: microstructure spherical-model-snow discrete-element-modelling unconfined-compression-experiments 3d-ct-images snow-mechanics

en: Data Structure (Python Notebook - view online)

en: Data Structure (Python Notebook)

en: Data Access

en:
For the investigation of microstructural and mechanical properties of snow unconfined compression experiments and 3D computed tomography (CT) imaging were performed on sintered rounded grain snow and spherical model snow. The spherical model snow was generated to create geometrically simplified, well-defined microstructures for calibration of numerical models, such as discrete element models (DEM) in which the microstructure is represented by spherical particles.
In the experiments, microstructural variation was created by varying the sintering time (contact size) and the density of the ice sphere samples (number of contacts). The 3D CT images allow for a complete reconstruction of the entire experimental sample (cylindrical sample dimension: diameter = 33.6 mm; height = 14 mm).

discrete-element-modelling

display_name: discrete-element-modelling

microstructure

display_name: microstructure

snow-mechanics

display_name: snow-mechanics

spherical-model-snow

display_name: spherical-model-snow

unconfined-compression-experiments

display_name: unconfined-compression-experiments

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Unconfined compression experiments and 3D CT images of spherical model snow and RG snow samples


en: nais naturalness nfi tree-species-composition protective-forest

en: Scherrer et al. 2023 - Data for analysis and figures

en:
This archive contains all the data needed to reconstruct the analysis and figures of
Scherrer, D., Allgaier Leuch, B., Fischer, C., Frehner, M. & Wohlgemuth, T. (2023) Maintaining the protective function of mountain forests under climate change by the concept of naturalness in tree species composition. Frontiers in Forests and Global Change, in review.

en: Scherrer et al. 2023 - Scripts

en:
This archive contains all the R-scripts to run the analysis and reconstruct the figures from
Scherrer, D., Allgaier Leuch, B., Fischer, C., Frehner, M. & Wohlgemuth, T. (2023) Maintaining the protective function of mountain forests under climate change by the concept of naturalness in tree species composition. Frontiers in Forests and Global Change, in review.

en: Data and scripts used by Scherrer et al. 2023 in the publication 'Maintaining the protective function of mountain forests under climate change by the concept of naturalness in tree species composition'. The analysis is based on data about the tree species composition of the canopy layer in the NFI4 and information about the potential natural forest of the sites based on the NaiS classification system.

nais

display_name: nais

naturalness

display_name: naturalness

nfi

display_name: nfi

protective-forest

display_name: protective-forest

tree-species-composition

display_name: tree-species-composition

en: Naturalness of tree species composition in protective forests


en: weisfluhjoch snow-stratigraphy snow-ice-temperature snow-density snow-water-equivalent

en: README

en: README file giving use metadata.

en: WFJ Snow Profiles 1999-2014

en:
Biweekly manual snow profiles from Weissfluhjoch, Davos, Switzerland.
Version: 2015-09-14T16:25

en: Dataset of manual bi-weekly snow profiles from Weissfluhjoch, Davos, Switzerland. Typical snow profile measurements and observations are included (temperature, density, grain size, grain type, hardness, wetness), following the guidelines of the The International Classification for Seasonal Snow on the Ground (ICSSG) [Fierz, C., Armstrong, R.L., Durand, Y., Etchevers, P., Greene, E., McClung, D.M., Nishimura, K., Satyawali, P.K. and Sokratov, S.A. 2009. The International Classification for Seasonal Snow on the Ground. IHP-VII Technical Documents in Hydrology N°83, IACS Contribution N°1, UNESCO-IHP, Paris].

snow-density

display_name: snow-density

snow-ice-temperature

display_name: snow-ice-temperature

snow-stratigraphy

display_name: snow-stratigraphy

weisfluhjoch

display_name: weisfluhjoch

educ

en: Education, culture and sport

en: Manual bi-weekly snow profiles from Weissfluhjoch, Davos, Switzerland


basal-area

title_for_slug: basal-area

en:
Sum of the stem cross-section areas of all living trees and shrubs starting at 12 cm dbh (standing and lying) at a height of 1.3 m (dbh measurement height).

Citation:
 > _Abegg, M.; Brändli, U.-B.; Cioldi, F.; Fischer, C.; Herold-Bonardi, A.; Huber M.; Keller, M.; Meile, R.; Rösler, E.; Speich, S.; Traub, B.; Vidondo, B. (2014). Fourth national forest inventory - result tables and maps on the Internet for the NFI 2009-2013 (NFI4b). [Published online 06.11.2014] Available from World Wide Web http://www.lfi.ch/resultate/ Birmensdorf, Swiss Federal Research Institute WSL. [doi:10.21258/1057112](https://doi.org/10.21258/1057112)_

accessible-forest-without-shrub-forest

display_name: accessible-forest-without-shrub-forest

altitudinal-vegetation-zone

display_name: altitudinal-vegetation-zone

avalanches-silvaprotect

display_name: avalanches-silvaprotect

basal-area

display_name: basal-area

biogeographical-region

display_name: biogeographical-region

canton

display_name: canton

conifers-broadleaves

display_name: conifers-broadleaves

diameter-classes

display_name: diameter-classes

economic-region

display_name: economic-region

forest-type-and-stage-of-development

display_name: forest-type-and-stage-of-development

giants

display_name: giants

landslide-mudflow-silvaprotect

display_name: landslide-mudflow-silvaprotect

lower-higher-altitudinal-zones

display_name: lower-higher-altitudinal-zones

main-tree-species

display_name: main-tree-species

ownership

display_name: ownership

potential-cost-for-timber-harvesting

display_name: potential-cost-for-timber-harvesting

processes-in-channels-silvaprotect

display_name: processes-in-channels-silvaprotect

production-region

display_name: production-region

protection-forest-region

display_name: protection-forest-region

rockfall-silvaprotect

display_name: rockfall-silvaprotect

site-quality

display_name: site-quality

stage-of-stand-development

display_name: stage-of-stand-development

tree-species-woody-species

display_name: tree-species-woody-species

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.


maintainer: Dirk Nikolaus Karger

en: climatology free-climate-data bioclim precipitation temperature climate climate-layers climate-change

en: CHELSA V1.2 (deprecated)

en: CHELSA Version 1.2 based on ERA-Interim forcings and CMIP5

format: GeoTIFF

en: CHELSA V2.1 (current)

en: CHELSA Version 2.1 based on ERA5 forcings and CMIP6

en: CHELSA Technical Documentation

en: Technical documentation document including the variable names, units, scaling, offset, and background.

en:
High-resolution information on climatic conditions is essential to many applications in environmental and ecological sciences. Here we present the CHELSA (Climatologies at high resolution for the earth’s land surface areas) data of downscaled temperature and precipitation to a high resolution of 30 arc sec. The temperature algorithm is based on statistical downscaling of atmospheric temperatures. The precipitation algorithm incorporates orographic predictors including wind fields, valley exposition, and boundary layer height, with a subsequent bias correction.

CHELSA data published in EnviDat includes the deprecated version 1.2 (originally published under 10.5061/dryad.kd1d4). Please use the current 2.1 version.

Paper Citation:
 > _Karger DN. et al. Climatologies at high resolution for the earth’s land surface areas, Scientific Data, 4, 170122 (2017) [doi: 10.1038/sdata.2017.122](https://doi.org/10.1038/sdata.2017.122)._

bioclim

display_name: bioclim

climate

display_name: climate

climate-change

display_name: climate-change

climate-layers

display_name: climate-layers

climatology

display_name: climatology

free-climate-data

display_name: free-climate-data

precipitation

display_name: precipitation

temperature

display_name: temperature


maintainer: Roksolana Petrovska

en: regeneration fagus lar acer shade-tolerance mortality-rate dominance

en: Mortality of regeneration

en: Acer platanoides, Acer pseudoplatanus and Fagus sylvatica living and dead juveniles (0-500 cm in height) grown in the deep shade of a prime beech-dominated forest.

en: The R-script of survival analysis for accelerated failure time model

en:
 One individual per species, vitality class (low and high) and height class (eight classes: 0–10, 11–20, 21–35, 36–60, 61–90, 91–130, 131–200 and 201–500 cm) was randomly selected and harvested in each of the six plots. This resulted in a sample of 82, 80 and 89 living individuals of A. platanoides, A. pseudoplatanus and F. sylvatica, respectively.

 Additionally stems of dead Acer spp. and F. sylvatica trees that had died within the last three years (2015–2018) were randomly harvested, matching the height classes of the harvested living trees wherever possible. In total, 179 dead young trees (60 A. platanoides, 72 A. pseudoplatanus and 47 F. sylvatica) were collected.

 Variables:
* species_code: a_pla - Acer platanoides, a_pse - Acer pseudoplatanus, f_syl - Fagus sylvatica
* species: as above
* dummy: 0 - living individual, 1 - dead individual
* LAR_cm2_g: leaf area ratio or ratio of leaf area to total plant biomass, [cm2/g]
* tree_age: in years
* avg_ring_micron: average width of the last 5 rings in tree life excluding the last ring
* dry_mass_g: aboveground and belowground biomass
* DLI: direct light index (measured only under living individuals)
* BLI: diffuse light index (measured only under living individuals)
* GLI: global light index

acer

display_name: acer

dominance

display_name: dominance

fagus

display_name: fagus

lar

display_name: lar

mortality-rate

display_name: mortality-rate

regeneration

display_name: regeneration

shade-tolerance

display_name: shade-tolerance

en: Mortality of regeneration: Acer spp. and Fagus sylvatica


en: number-of-dead-persons number-of-caught-persons avalanche-accidents avalanche-fatalities avalanche-accident-statistics

en: Fatal avalanche accidents in Switzerland since 1936/37

en:
**When using this data, please consider and adhere to the associated [Terms of Use](https://www.slf.ch/en/services-and-products/data-and-monitoring/slf-data-service.html)**.

This data collection contains information concerning all known accidents by snow avalanches in Switzerland with at least one fatality. The data set commences on 01/10/1936. After the completion of a hydrological year, the new data is added.

The following information is provided:

 * avalanche identifier
 * date of the accident
 * accuracy of the date in range of days before and after
 * hydrological year (always from first of october to end of september)
 * canton
 * municipality
 * start zone point latitude
 * start zone point longitude
 * start zone point accuracy (in meters)
 * start zone point elevation (in meteres above sea level)
 * slope aspect (main orientation of start zone)
 * slope inclination (in degree, steepest point within start zone)
 * forecasted avalanche danger level 1 (first danger)
 * forecasted avalanche danger level 2 (second danger)
 * accident within the core zone (most dangerous aspect and elevation as mentioned in the forecast)
 * number of dead persons
 * number of caught persons
 * number of fully buried persons
 * activity/location of the accident party at the time of the incident

avalanche-accident-statistics

display_name: avalanche-accident-statistics

avalanche-accidents

display_name: avalanche-accidents

avalanche-fatalities

display_name: avalanche-fatalities

number-of-caught-persons

display_name: number-of-caught-persons

number-of-dead-persons

display_name: number-of-dead-persons

educ

en: Education, culture and sport


en: long-term temperature meteo wind-speed swiss-forest-lab precipitation par meteorology climate-change relative-humidity

en: Field station data (BTF)

en: Data file.

en: Data plot of the forest station (BTB)

en: Data overview for air temperature, relative humidity, precipitation, PAR, wind speed.

en: Site aerial photo (Bettlachstock)

en: Site aerial photo from both Bettlachstock stations. Source: Google. 2016. Site aerial photo from both Bettlachstock stations. Retrieved November 11, 2016, from https://www.google.ch/maps

en: Site photo of the field station (BTF)

en: Site photo of the field station from the side.

en: Data plot of the field station (BTF)

en: Site photo of the forest station (BTB)

en: Site photo of the forest station from the side.

en: High quality meteorological data are needed for long-term forest ecosystem research, particularly in the light of global change. The long-term data series published here comprises almost 20 years of measurements for two meteorological stations in Bettlachstock in Switzerland where one station is located within a natural mixed forest stand (BTB) with European beech (_Fagus sylvatica_; 170-190 yrs), European silver fir (_Abies alba_; 190 yrs) and Norway spruce (_Picea abies_; 200 yrs) as dominant tree species. A second station is situated in the very vicinity outside of the forest (field station, BTF). The meteorological time series are presented in hourly time resolution of air temperature, relative humidity, precipitation, photosynthetically active radiation (PAR) and wind speed. Bettlachstock is part of the Long-term Forest Ecosystem Research Programme (LWF) established and maintained by the Swiss Federal Research Institute WSL.

climate-change

display_name: climate-change

long-term

display_name: long-term

meteo

display_name: meteo

meteorology

display_name: meteorology

par

display_name: par

relative-humidity

display_name: relative-humidity

swiss-forest-lab

display_name: swiss-forest-lab

wind-speed

display_name: wind-speed

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Bettlachstock, Switzerland: Long-term forest meteorological data from the Long-term Forest Ecosystem Research Programme (LWF), from 1997 onwards


maintainer: Marcus Schaub

en: diameter-at-breast-height forest irrigation swiss-forest-lab dbh scots-pine lwf tree-species crown-condition drought tree

en: Long-term Irrigation	Experiment Pfynwald homepage

media_type: text/html

format: HTML

mimetype: text/html

en: Site photo 2

en: Site photo 3

en: Site photo 1

en: Swiss Forest Health Inventory

en: Shapefile	of measurement location

en: Dataset

en: To study the performance of mature Scots pine (_Pinus sylvestris_ L.) under chronic drought conditions in comparison to their immediate physiological response to drought release, a controlled long-term and large-scale irrigation experiment has been set up in 2003. The experiment is located in a xeric mature Scots pine forest in the Pfynwald (46° 18' N, 7° 36' E, 615 m a.s.l.) in one of the driest inner-Alpine valleys of the European Alps, the Valais (mean annual temperature: 9.2°C, annual precipitation sum: 657 mm, both 1961-1990). Tree age is on average 100 years, the top height is 10.8 m and the stand density is 730 stems ha-1 with a basal area of 27.3 m2 ha-1. The forest is described as _Erico Pinetum sylvestris_ and the soil is a shallow pararendzina characterized by low water retention. The experimental site (1.2 ha; 800 trees) is split up into eight plots of 1'000 m2 each. During April-October, irrigation is applied on four randomly selected plots with sprinklers of 1 m height at night using water from an adjacent water channel. The amount of irrigation corresponds to a supplementary rainfall of 700 mm year-1. Trees in the other four plots grow under naturally dry conditions. Soil moisture has been monitored since the beginning of the project at 3 soil depths (10, 20 and 60 cm). The crown condition of each tree is being assessed each year since 2003. Tree measurement data such as diameter at breast height, tree height, and social status were assessed in 2002, 2009 and 2014. The duration of the irrigation experiment is planned for 20 years.

crown-condition

display_name: crown-condition

dbh

display_name: dbh

diameter-at-breast-height

display_name: diameter-at-breast-height

drought

display_name: drought

forest

display_name: forest

irrigation

display_name: irrigation

lwf

display_name: lwf

scots-pine

display_name: scots-pine

tree

display_name: tree

tree-species

display_name: tree-species

educ

en: Education, culture and sport

en: Tree measurements 2002-2016 from the long-term irrigation experiment Pfynwald, Switzerland


en: geospatial jupyter roads buffer density gis

en: Plots

en: Random plot locations

en: Road data from OSM for the surroundings of Menzberg, Switzerland

en: Road Density Calculation (Python Notebook) online

en:
This dataset contains the road and plot data used for the geospatial analysis example showcased in "Fostering Open Science at WSL with the EnviDat Environmental Data Portal", a contribution to the 5th Open Source Geospatial Research and Education Symposium (OGRS), 2018.
The example uses Jupyter Notebook to calculate road densities in the neighbourhood of sample plot locations with Python. Road data were extracted from OpenStreetMap, while the point data (sample plots) were generated manually.

buffer

display_name: buffer

density

display_name: density

geospatial

display_name: geospatial

gis

display_name: gis

jupyter

display_name: jupyter

roads

display_name: roads

en: Dataset for OGRS 2018 publication


en: growth-and-yield tree-height silviculture permanent-plot crown-diameter switzerland forest-inventory long-term-monitoring

en: Meta data

en: Basic information for each plot

en: Data paper

en: Description of plot network, methodology, and data.

en: Tree data

en: Data for each individual tree

en: The EFM network is one of the longest running scientific projects in Switzerland and has been collecting growth and yield data since the late 1880’s. As of 2021, 28 plots had been monitored for at least 100 years and 81 for at least 75 years. The network is used to examine silvicultural treatments across a range of species, climate and edaphic conditions. There are currently 465 plots covering a total area of 148 hectares. Over the > 130-year history of the project, at least another 1000 plots were monitored and then deactivated after they reached their experimental goal (e.g. end of the rotation). The data from all 1480 plots are available for analyses.

crown-diameter

display_name: crown-diameter

forest-inventory

display_name: forest-inventory

growth-and-yield

display_name: growth-and-yield

long-term-monitoring

display_name: long-term-monitoring

permanent-plot

display_name: permanent-plot

silviculture

display_name: silviculture

switzerland

display_name: switzerland

tree-height

display_name: tree-height

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: The Experimental Forest Management network


en: evapotranspiration soil-moisture ecohydrology evaporation net-radiation

en: R data file containing gridded net radiation and soil moisture values

en:
Net radiation (W/m2), variable name: NetRadiation, source: Viviroli et al., 2009, spatial resolution: 500 m,
temporal resolution: daily, year 2004, extent: Switzerland.

Soil moisture saturation (-), variable name: SoilMositure, source: simulations from the hydrological model PREVAH,
Brunner et al., 2019; Speich et al., 2015; Orth et al., 2015; Zappa et al., 2003, spatial resolution: 500 m, temporal
resolution: daily, year 2004, extent: Switzerland.

The R command to load the data:
load(“500m_SM_NetRad_2004_for_HESS_raster.RData”)

en: simple R script to load the data and generate sample plots

en: R data set containing R raster objects with 500m gridded daily modeled soil moisture and net radiation covering Switzerland for the year 2004.

ecohydrology

display_name: ecohydrology

evaporation

display_name: evaporation

evapotranspiration

display_name: evapotranspiration

net-radiation

display_name: net-radiation

soil-moisture

display_name: soil-moisture

educ

en: Education, culture and sport

en: daily 500m gridded net radiation and soil moisture for Switzerland, 2004


en: davos longwave-radiation shortwave-radiation incoming outgoing

en: Processing doc

en: Parameter file

en: DATA ACCESS

en: Metadata

en:
Incoming and outgoing shortwave and longwave 2 min radiation measurements in Davos Dorf, CH.

 References
1. Marty, C., Philipona, R., Frohlich, C., Ohmura, A.. Altitude dependence of surface radiation fluxes and cloud forcing in the alps: results from the alpine surface radiation budget network. 2002. Theoretical and Applied Climatology. Volume 72. Issue 3-4. 137-155. http://dx.doi.org/10.1007/s007040200019. 10.1007/s007040200019.
2. Christoph Marty. Surface Radiation, Cloud Forcing and Greenhouse Effect in the Alps. 2000. Institute fuer Klimaforschung ETH. Zuercher Klima-Schriften. Volume 79. http://e-collection.library.ethz.ch/eserv/eth:23491/eth-23491-01.pdf.

davos

display_name: davos

incoming

display_name: incoming

longwave-radiation

display_name: longwave-radiation

outgoing

display_name: outgoing

shortwave-radiation

display_name: shortwave-radiation

en: ASRB_DAV: Shortwave and longwave radiation measurements (2 min) in Davos Dorf


snow-depth-mapping

maintainer: Mauro Marty

title_for_slug: snow-depth-mapping

en: aerial-imagery dsm image-matching avalanche snow-depth snow-hydrology snow-water-equivalent

en: Snow depth map 20130415

media_type: image/tiff

en: Snow depth map generated from ADS 80 imagery (CIR). GSD of imagery = 0.25 m

format: TIFF

mimetype: image/tiff

en: Snow depth map 20160420

en: Snow depth map 20120320

en: Snow depth map 20160126

en:
Snow depth map generated from ADS 100 imagery (CIR). GSD of imagery = 0.16 m
Because of very diffuse light conditions at time of image acquisition the quality of the resulting snow depth values are in some regions quite poor.

en: Snow depth map 20150415

en: Snow depth map 20100416

en: Snow depth map 20160309

en: Snow depth map 20140417

en: Snow depth map generated from ADS 100 imagery (CIR). GSD of imagery = 0.18 m

en:
The available datasets are snow depth maps with a spatial resolution of 2m generated from image matching of ADS 80/100 data. Image acquisition took place at peak of winter (time when the thickest snowpack is expected). The snow depth maps are the difference of a summer DSM from the winter DSM of the corresponding date . The summer DSM used is a product of image matching of ADS 80 data from summer 2013. In the available products buildings, vegetation and outliers were masked (set to NoData).
For the elimination of buildings the TLM layer (swisstopo) was used, because this layer might not represent exactly the
state of infrastructure at time of image acquisition, it is possible that mainly in dense settlement some buildings were not successfully masked. For the relevant area above treeline the masking of buildings showed good results. Vegetation got masked for a height above ground > 1m and was detected in a combination of summer and winter data sets. As Outliers were considered unrealistic snow depths caused by a failure of the image matching algorithm. Snow depths > 15m and smaller than < -15m were classified as outliers. Negative snow depth were kept, because of an uncertainty in image orientation accuracy. It is expected that in regions with negative snow depth also positive snow depth are underestimated by the same amount, which means that an estimation of snow volume should be carried out summing up the absolute values of snow depth (also the negative ones). For volume estimation in small regions the user has to take into account, that orientation accuracy of the images is roughly around 1-2 GSD (30cm), which propagates directly to the snow depth product. Areas which are not covered by snow got assigned a value of 0 as snow depth.

The work is published in:

Bühler, Y.; Marty, M.; Egli, L.; Veitinger, J.; Jonas, T.; Thee, P.; Ginzler, C., (2015). Snow depth mapping in high-alpine catchments using digital photogrammetry. Cryosphere, 9 (1), 229-243. doi: 10.5194/tc-9-229-2015

aerial-imagery

display_name: aerial-imagery

avalanche

display_name: avalanche

dsm

display_name: dsm

image-matching

display_name: image-matching

snow-depth

display_name: snow-depth

snow-hydrology

display_name: snow-hydrology

snow-water-equivalent

display_name: snow-water-equivalent

envidat

en: EnviDat: the Environmental Data Portal


en: wind-speed meteo swiss-forest-lab precipitation temperature meteorology climate-change par long-term relative-humidity

en: Field station data (NOF)

en: Data file.

en: Data plot of the forest station (NOB)

en: Data overview for air temperature, relative humidity, precipitation, PAR, wind speed.

en: Site photo of the forest station (NOB)

en: Site photo of the forest station from the side.

en: Forest station data (NOB)

en: Data plot of the field station (NOF)

en: Site photo of the field station (NOF)

en: Site photo of the field station from the side.

en: Site aerial photo (Novaggio)

en: Site aerial photo from both Novaggio stations. Source: Google. 2016. Site aerial photo from both Novaggio stations. Retrieved November 15, 2016, from https://www.google.ch/maps

en: High quality meteorological data are needed for long-term forest ecosystem research, particularly in the light of global change. The long-term data series published here comprises almost 20 years of measurements for two meteorological stations in Novaggio in Switzerland where one station is located within a natural deciduous forest stand (NOB) with Turkey oak (_Quercus cerris_; 70 yrs), sweet chestnut (_Castanea sativa_; 90 yrs) and silver birch (_Betula pendula_; 70 yrs) as dominant tree species. A second station is situated in the very vicinity outside of the forest (field station, NOF). The meteorological time series are presented in hourly time resolution of air temperature, relative humidity, precipitation, photosynthetically active radiation (PAR) and wind speed. Novaggio is part of the Long-term Forest Ecosystem Research Programme (LWF) established and maintained by the Swiss Federal Research Institute WSL.

climate-change

display_name: climate-change

long-term

display_name: long-term

meteo

display_name: meteo

meteorology

display_name: meteorology

par

display_name: par

precipitation

display_name: precipitation

relative-humidity

display_name: relative-humidity

swiss-forest-lab

display_name: swiss-forest-lab

temperature

display_name: temperature

wind-speed

display_name: wind-speed

educ

en: Education, culture and sport

envidat

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Novaggio, Switzerland: Long-term forest meteorological data from the Long-term Forest Ecosystem Research Programme (LWF), from 1996 onwards


en: snow hazard-mapping natural-hazard avalanche satellite

en: SPOT6 Avalanche outlines 24 January 2018

en: Shapefile of the manually mapped avalanche outlines. Please only use this data together with the example key document provided with this dataset.

format: SHP

en:
Outlines of 18'737 avalanches mapped from SPOT6 satellite data over the Swiss Alps on 24 January 2018. The outlines have different attributes described in the data example key (ExampleKey_AvalMapping.pdf)

The generation of the data is described in:

Bühler, Y., E. D. Hafner, B. Zweifel, M. Zesiger, and H. Heisig (2019), Where are the avalanches? Rapid SPOT6 satellite data acquisition to map an extreme avalanche period over the Swiss Alps, The Cryosphere, 13(12), 3225-3238, doi:10.5194/tc-13-3225-2019.

Abstract.
Accurate and timely information on avalanche occurrence are key for avalanche warning, crisis management and avalanche documentation. Today such information is mainly available at isolated locations provided by observers in the field. The achieved reliability considering accuracy, completeness and reliability of the reported avalanche events is limited. In this study we present the spatial continuous mapping of a large avalanche period in January 2018 covering the majority of the Swiss Alps (12’500 km2).

We tested different satellite sensors available for rapid mapping during a first avalanche period. Based on these experiences, we tasked SPOT6/7 data for data acquisition to cover the second, much larger avalanche period. We manually mapped the outlines of 18’737 individual avalanche events, applying image enhancement techniques to analyze regions in cast shadow as well as brightly illuminated ones. The resulting dataset of mapped avalanche outlines, having a unique completeness and reliability, is evaluated to produce maps of avalanche occurrence and avalanche size. We validated the mapping of the avalanche outlines using photographs acquired from helicopters just after the avalanche period.

This study demonstrates the applicability of optical, very high spatial resolution satellite data to map an exceptional avalanche period with very high completeness, accuracy and reliability over a large region. The generated avalanche data is of great value to validate avalanche bulletins, complete existing avalanche databases and for research applications by enabling meaningful statistics on important avalanche parameters.

Koordinate System: CH1903+ LV95 LN02

hazard-mapping

display_name: hazard-mapping

natural-hazard

display_name: natural-hazard

satellite

display_name: satellite

snow

display_name: snow

en: EnviDat: the Environmental Data Portal


en: drought 3-pg growth-limitation vpd climate-change tree-rings

en: Limiting factors

en: Spatially resolved simulated environmental constraints during the 1961-1990 and 1991-2018 period.

en: Seasonal variation in environmental constraints (vapor pressure deficit – VPD, air temperature, and soil moisture) on tree growth for the potential distribution range of seven widespread Central European tree species. We simulated environmental constraints on growth fusing 3-PG model or the species’ potential distribution range within the forested area of Switzerland on a 1×1 km grid for seven dominant tree species: _Larix decidua_, _Picea abies_, _Abies alba_, _Fagus sylvatica_, _Acer pseudoplatanus_, _Pinus sylvestris_, and _Quercus robur_. For this purpose, we simulated the growth of these tree species in monocultures with the average climate observed during 1961–1990 or 1991-2018. The stands were initialized as 2-year-old plantations with an initial density of 2,500 trees ha-1 and simulated until the age of 30 years. For each simulated month, we obtained the relative contribution of environmental constraints (VPD, temperature, and soil water) on tree growth.

drought

display_name: drought

growth-limitation

display_name: growth-limitation

tree-rings

display_name: tree-rings

vpd

display_name: vpd

en: Environmental constraints on tree growth


maintainer: Marcia Phillips

en: permos temperature borehole permafrost gemsstock

en: Map of PERMOS borehole network

en: PERMOS DATA POLICY

en: DATASET & PLOTS

en: Data visualiser and download service provided by PERMOS.

en:
Processed ground temperature measurements at the Gemsstock permafrost borehole in canton Uri, Switzerland. The borehole is located at 2940 m asl on a steep (50°) North-West slope (315°). The surface material is bedrock and borehole depth is 40 m. Thermistors used YSI 44008. Year of drilling 2006. This borehole is part of the Swiss Permafrost network, PERMOS (www.permos.ch). Contact phillips@slf.ch for details of processing applied.

Publications

1. A. Haberkorn, M. Phillips, R. Kenner, H. Rhyner, M. Bavay, S.P. Galos, M. Hoelzle. Thermal regime of rock and its relation to snow cover in steep Alpine rock walls: Gemsstock, central Swiss Alps. 2015. Geografiska Annaler: Series A, Physical Geography. Volume 97. Issue 3. 579–597. http://dx.doi.org/10.1111/geoa.12101. 10.1111/geoa.12101.

2. R. Kenner, M. Phillips, C. Danioth, C. Denier, P. Thee, A. Zgraggen. Investigation of rock and ice loss in a recently deglaciated mountain rock wall using terrestrial laser scanning: Gemsstock, Swiss Alps. 2011. Cold Regions Science and Technology. Volume 67. Issue 3. 157–164. http://dx.doi.org/10.1016/j.coldregions.2011.04.006. 10.1016/j.coldregions.2011.04.006.

borehole

display_name: borehole

gemsstock

display_name: gemsstock

permafrost

display_name: permafrost

permos

display_name: permos

en: Processed permafrost borehole data (2940 m asl), Gemsstock, Switzerland


en: willow pterocomma-pilosum spruce phenols cinara-pilicornis lymantria-monacha

en: Heavy metal insects

en: See ReadMe

en: In controlled model forest ecosystems young trees were exposed to heavy metals in the soil and to acid precipitation. On spruce trees Lymantria monacha caterpillars and Cinara pilicornis aphids and on willow Pterocomma pilosum aphids were reared and monitored. Developmental time and fecundity of L. monacha were recorded and in aphids colony growth was measured.

cinara-pilicornis

display_name: cinara-pilicornis

lymantria-monacha

display_name: lymantria-monacha

phenols

display_name: phenols

pterocomma-pilosum

display_name: pterocomma-pilosum

spruce

display_name: spruce

willow

display_name: willow

educ

en: Education, culture and sport

envidat

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Plant-mediated effects of heavy metals and acid rain on feeding aphids and caterpillars