maintainer: Joan Casanelles Abella

en: antwerp osmia-bicornis chelostoma-florisomne trap-nest hylaeus-communis tartu plant-pollinator-interactions dna-metabarcoding urban-ecology paris osmia-cornuta poznan zurich cavity-nesting-bees

en: Larval food composition

en: Information on the study sites

en: For each site, IDs, city, coordinates, structure where trapnest was attahced and height of the trapnest is provided

en: Explanation data variables

en: Urbanization poses threats and opportunities for the biodiversity of wild bees. A main gap relates to the food preferences of wild bees in urban ecosystems, which usually harbour large numbers of plant species, particularly at the larval stage. This data sets describes the larval food of four wild bee species (i.e. Chelostoma florisomne, Hylaeus communis, Osmica bicornis and Osmia cornuta) and three genera (i.e. Chelostoma sp., Hylaeus sp, and Osmia sp.) common in urban areas in five different European cities (i.e. Antwerp, Paris, Poznan, Tartu and Zurich). This data results from a European-level study aimed at understanding the effects of urbanization on biodiversity across different cities and citiscapes, and a Swiss project aimed at understanding the effects of urban ecosystems in wild bee feeding behaviour. Wild bees were sampled using standardized trap-nests in 80 sites (32 in Zurich and 12 in each of the remaining cities), selected following a double gradient of available habitat at local and landscape scales. Larval pollen was obtained from the bee nests and identified using DNA metabarconding. The data provides the plant composition at the species or genus level of the different bee nests of the studied species in the studied sites of the five European cities. For Hylaeus communis, this is the first study in reporting larval food composition.

antwerp

display_name: antwerp

cavity-nesting-bees

display_name: cavity-nesting-bees

chelostoma-florisomne

display_name: chelostoma-florisomne

dna-metabarcoding

display_name: dna-metabarcoding

hylaeus-communis

display_name: hylaeus-communis

osmia-bicornis

display_name: osmia-bicornis

osmia-cornuta

display_name: osmia-cornuta

paris

display_name: paris

plant-pollinator-interactions

display_name: plant-pollinator-interactions

poznan

display_name: poznan

tartu

display_name: tartu

trap-nest

display_name: trap-nest

urban-ecology

display_name: urban-ecology

zurich

display_name: zurich

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Larval food composition of four wild bee species in five European cities


maintainer: Peter Bebi

en: soil-temperature climate-change stillberg experiment vegetation carbon-dioxide

state: active

type: dataset

en: Data FACE Stillberg

media_type: application/zip

en: Folder in .zip format containing the FACE datasets.

format: ZIP

mimetype: application/zip

en: Metadata FACE Stillberg Data File Description

media_type: text/csv

en: List of descriptions for each of the .csv FACE data files.

format: CSV

en: Project Description FACE Stillberg

media_type: text/html

en: Link to FACE project description on the WSL website.

format: HTML

en: Metadata FACE Stillberg Experimental Design

media_type: application/pdf

en: Schematic illustration and tabular listing of the FACE experimental design.

format: PDF

en:
 Background information

High elevation ecosystems are important in research about environmental change because shifts in climate associated with anthropogenic greenhouse gas emissions are predicted to be more pronounced in these areas compared to most other regions of the world. This project involved a Free Air CO2 Enrichment (FACE) and soil warming experiment located in a natural treeline environment near Davos, Switzerland (Stillberg, 2200 m a.s.l.). Elevated atmospheric CO2 concentrations (+200 ppm) were applied from 2001 until 2009, and a soil warming treatment (+4 °C) was applied from 2007 until 2012. The combined CO2 enrichment and warming treatment reflects conditions expected to occur in this region in approximately 2050. A broad range of ecological and biogeochemical research was carried out as part of this environmental change project.

 Experimental design

The experiment consisted of 40 hexagonal 1.1 m² plots, 20 with a *Pinus mugo* ssp. *uncinata* (mountain pine, evergreen) individual in the centre and 20 with a *Larix decidua* (European larch, deciduous) individual in the centre. A dense cover of understorey vegetation surrounded the tree in each plot, including the dominant dwarf shrub species *Vaccinium myrtillus* (bilberry), *Vaccinium gaultherioides* (group *V. uliginosum agg.*, northern bilberry) and *Empetrum nigrum* ssp. *hermaphroditum* (crowberry) plus several herbaceous and non-vascular species.
At the beginning of the experimental period, the 40 plots were assigned to ten groups of four neighbouring plots (two larch and two pine trees per group) in order to facilitate the logistics of CO2 distribution and regulation. Half of these groups were randomly assigned to an elevated CO2 treatment, while the remaining groups served as controls and received no additional CO2. In spring 2007, one plot of each tree species identity was randomly selected from each of the 10 CO2 treatment groups and assigned a soil warming treatment, yielding a balanced design with a replication of five individual plots for each combination of CO2 level, warming treatment and tree species.

 Data description

Soil and air conditions have been monitored closely throughout the study period, with most measurements made during the combined CO2 x warming experiment (2007-2009). The data comprise of air temperature, soil temperature, soil moisture, sapflow, tree diameter and CO2 measurements.

carbon-dioxide

display_name: carbon-dioxide

climate-change

display_name: climate-change

experiment

display_name: experiment

soil-temperature

display_name: soil-temperature

stillberg

display_name: stillberg

vegetation

display_name: vegetation

educ

fr: Éducation, culture et sport

de: Bildung, Kultur und Sport

it: Istruzione, cultura e sport

fr: EnviDat: le portail de données environnementales

de: EnviDat: das Umwelt-Datenportal

it: EnviDat: il portale dei dati ambientali

fr: EnviDat est le portail de données du WSL; il offre un accès uniformisé et réglementé aux données de surveillance et de recherche en matière d’environnement. Ce portail est capable d’héberger et de publier des ensembles de données précieuses et uniques, qui sont partagées aux quatre coins de la planète. Ce faisant, EnviDat favorise la recherche et contribue à l’avancement des sciences environnementales.

de: EnviDat ist das Datenportal der WSL für einen einheitlichen und verwalteten Zugang zu Umweltdaten aus Monitoring- und Forschungsprojekten. Auf dem Portal können Datensätze gehostet und veröffentlicht werden. Durch die weltweite Bereitstellung einzigartiger und wertvoller Datensätze leistet EnviDat einen Beitrag zur Forschung im Bereich der Umweltwissenschaften.

it: EnviDat è il portale dati del WSL che fornisce un accesso unificato e gestito ai dati di monitoraggio ambientale e di ricerca. Il portale ha la capacità di ospitare e pubblicare serie di dati preziosi e unici che vengono condivisi in tutto il mondo. Così facendo, EnviDat promuove la ricerca e contribuisce al progresso della scienza ambientale.

political_level: other

wsl

capacity: public

type: organization

approval_status: approved

key: guid

key: uri

value: Envidat Harvester

en: FACE: Stillberg CO2 enrichment and soil warming study


maintainer: Franziska Gerber

en: python antarctica consistent cryowrf aws

en: Scripts to preprocess (and download for some databases) atmospheric weather station data. Furthermore, a list of stations and a map can be created to have an overview.

format: SERVICE

en:
There are many sources providing atmospheric weather station data for the Antarctic continent. However, variable naming, timestamps and data types are highly variable between the different sources. The published python code intends to make processing of different AWS sources from Antarctica easier. For all datasets that are taken into account variables are renamed in a consistent way. Data from different sources can then be handled in one consistent python dictionary.

The following data sources are taken into account:

* AAD: Australian Antarctic Division (https://data.aad.gov.au/aws)
* ACECRC: Antarctic Climate and Ecosystems Cooperative Research Centre by the Australian Antarctic Division
* AMRC: Antarctic Meteorological Research Center (ftp://amrc.ssec.wisc.edu/pub/aws/q1h/)
* BAS: British Antarctic Survey (ftp://ftp.bas.ac.uk/src/ANTARCTIC_METEOROLOGICAL_DATA/AWS/; https://legacy.bas.ac.uk/met/READER/ANTARCTIC_METEOROLOGICAL_DATA/)
* CLIMANTARTIDE: Antarctic Meteo-Climatological Observatory by the italian National Programme of Antarctic Research (https://www.climantartide.it/dataaccess/index.php?lang=en)
* IMAU: Institute for Marine and Atmospheric research Utrecht (Lazzara et al., 2012), https://www.projects.science.uu.nl/iceclimate/aws/antarctica.ph
* JMA: Japan Meteorological Agency (https://www.data.jma.go.jp/antarctic/datareport/index-e.html)
* NOAA: National Oceanic and Atmospheric Administration (https://gml.noaa.gov/aftp/data/meteorology/in-situ/spo/)
* Other/AWS_PE: Princess Elisabeth (PE), KU Leuven, Prof. N. van Lipzig, personal communication
* Other/DDU_transect: Stations D-17 and D-47 (in transect between Dumont d’Urville and Dome C, Amory, 2020)
* PANGAEA: World Data Center (e.g. König-Langlo, 2012)

Important notes

* Information about data sources is available. Some downloading scripts are included in the provided code. However, users should make sure to comply with the data providers terms and conditions.
* Given changing download options of the differnent institutions the above links may not permanently work and data has to be retrieved by the user of this dataset.
* No quality control is applied in the provided preprocessing software - quality control is up to the user of the datasets. Some dataset are quality controlled by the owner.

Acknowledgements
--------------------------
We thank all the data providers for making the data publicly available or providing them upon request. Full acknowledgements can be found in Gerber et al., submitted.

References
---------------
Amory, C. (2020). “Drifting-snow statistics from multiple-year autonomous measurements in Adélie Land, East
Antarctica”. The Cryosphere, 1713–1725. doi: 10.5194/tc-14-1713-2020

Gerber, F., Sharma, V. and Lehning, M.: CRYOWRF - a validation and the effect of blowing snow on the Antarctic SMB, JGR - Atmospheres, submitted.

König-Langlo, G. (2012). “Continuous meteorological observations at Neumayer station (2011-01)”. Alfred Wegener
Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, doi: 10.1594/PANGAEA.
775173

antarctica

display_name: antarctica

aws

display_name: aws

consistent

display_name: consistent

cryowrf

display_name: cryowrf

python

display_name: python

en: Preprocessing Antarctic Weather Station (AWS) data in python


maintainer: EnviDat Support

en: geometrical anisotropy elasticity crystallographic fem x-ray-tomography microstructure

en:
The study aims to determine the effective elastic properties of snow, firn, and bubbly ice based on microstructural quantities. Anisotropy, one of these quantities (the other being ice volume fraction) in snow and ice, has two types: geometrical and crystallographic, resulting in snow's macroscopic anisotropic elastic behavior. The research focuses on the impact of geometrical anisotropy on potential ice volume fractions in snow and ice. 391 micro-CT images from various locations, including laboratories, the Alps, the Arctic, and Antarctica, were analyzed to achieve this.
 The analysis involved microstructure-based finite element simulations, which inherently consider microstructure and calculate the elasticity tensor. Hashin-Shtrikman bounds were utilized to predict the elastic properties of the microstructure samples. These bounds effectively captured the nonlinear interplay between geometrical anisotropy, captured by the Eshelby tensor and density. HS bounds have the advantage of the correct limiting behavior for low to high-ice volume fractions.
 We derived parameterization for five transversely isotropic elasticity tensor components, requiring only two free parameters. This parameterization was valid for ice volume fractions ranging from 0.06 to 0.93. The analysis employing the Thomsen parameter highlighted the dominance of geometrical anisotropy until an ice volume fraction of 0.7. However, to fully comprehend the elasticity of bubbly ice, a comprehensive approach is necessary to integrate coupled elastic theories that account for both geometrical and crystallographic anisotropy.
This dataset includes a Jupyter notebook with all the necessary functions required to predict the elasticity tensor of snow for the given ice volume fraction and anisotropy. Also, the code contains the least squares optimization function to compute the elasticity tensor for the six components of stress and strain. For example, we consider our dataset to calculate the samples' elasticity tensor and reproduce Fig. 7 from the paper. We take the stress and strain values obtained from load states as input for this example.
Also, a .csv file contains all the microstructural information: ice volume fraction, anisotropy, correlation functions, voxels size, and no. of voxels of the samples and the elasticity tensor obtained from finite element simulations and from present work parameterization.

anisotropy

display_name: anisotropy

crystallographic

display_name: crystallographic

elasticity

display_name: elasticity

fem

display_name: fem

geometrical

display_name: geometrical

microstructure

display_name: microstructure

x-ray-tomography

display_name: x-ray-tomography

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Effective, anisotropic elasticity tensor of snow, firn, and bubbly ice


maintainer: Leo Gallus Bont

en: digital-elevation-model open-source qgis-plugin digital-planning swiss-geodata geoinformation-software swisstopo seilaplan cable-yarding

en: View video on youtube!

en: Herunterladen des DHM von swisstopo Website

en:
In order to use the QGIS plugin ‘Seilaplan’ for digital cable line planning, a digital terrain model (DTM) is required. As an alternative to using the ‘Swiss Geo Downloader’ plugin, the DTM can be obtained directly from Swisstopo. In this tutorial we explain step by step how to download the necessary DTM from the Swisstopo Website, and how to use it in QGIS for the digital planning of a cable line using the plugin ‘Seilaplan’. Please note that the tutorial language is German!

Link to the elevation model on the swisstopo website: https://www.swisstopo.admin.ch/de/geodata/height/alti3d.html#technische_details

Link to the rope map website: https://seilaplan.wsl.ch

********************

Für die Verwendung des QGIS Plugins Seilaplan zur digitalen Seillinienplanung ist ein digitales Höhenmodell (DHM) nötig. Als Alternative zum Swiss Geo Downloader erklären wir in diesem Tutorial Schritt für Schritt, wie man das nötige Höhenmodell von der Swisstopo Webseite herunterladen und in QGIS zur Seillinienplanung verwenden kann.

Link zum Höhenmodell auf der swisstopo Webseite: https://www.swisstopo.admin.ch/de/geodata/height/alti3d.html#technische_details

Link zur Seilaplan-Website: https://seilaplan.wsl.ch

cable-yarding

display_name: cable-yarding

digital-elevation-model

display_name: digital-elevation-model

digital-planning

display_name: digital-planning

geoinformation-software

display_name: geoinformation-software

open-source

display_name: open-source

qgis-plugin

display_name: qgis-plugin

seilaplan

display_name: seilaplan

swiss-geodata

display_name: swiss-geodata

swisstopo

display_name: swisstopo

en: Seilaplan Tutorial: DTM download from swisstopo website


maintainer: Jonas Stillhard

en: temperate-forests forest-in beech forest-reserves swiss-plateau

en: Results TreMs

en: The file results_trems.csv contains results for the density of TreMs per ha.

format: XLS

en: Results regeneration

en: The file results_regeneration.csv contains results of the regeneration survey.

en: Results habitat trees

en: The file results_habitat_trees.csv contains results for the number of habitat trees.

en: Results lying deadwood

en: The file results_lying_deadwood.csv contains results of the lying deadwood survey.

en: Results trees

en:
The file results_trees.csv contains results of living, standing and lying and dead standing
trees as well as for stumps (trees found on the plot but broken / cut below 1.3 m).

en: Data description

en: This document briefly describes the datasets.

en: Lookup

en: The file lookup.csv contains description for the values shown in the 5 result tables.

en:
The Jorat is one of the largest continously forested areas in the Swiss Plateau. On a forested area of 778 ha, the Parc Naturel du Jorat (PNJ), a periurban parc, has been established in 2022. To document the initial state of the forest within the perimeter of the PNJ, a sample plot inventory (SPI) was carried out on 132 sample plots (SP) in winter 2021/22.
This dataset contains results from this sample plot inventory. It consists of the following files:
- results_trees.csv: Results for or living and dead trees.
- results_regeneration.csv: Results for trees with DBH < 7.0 cm, assessed in three height classes.
- results_lying_deadwood.csv: Results for lying deadwood, assessed no three line transects
- results_trems.csv: Results for occurence of tree related microhabitats (TreMs)
- results_habitat_trees.csv: Results for occurence / densities of trees carrying at least one TreM or with a DBH >= 80 for living trees or >= 36 cm for dead trees respectively.
- lookup.csv: Contains lookup tables which describe the respective results in-depth.
- data_description.pdf: Briefly describes the datasets mentioned above.

beech

display_name: beech

forest-in

display_name: forest-in

forest-reserves

display_name: forest-reserves

swiss-plateau

display_name: swiss-plateau

temperate-forests

display_name: temperate-forests

en: Sample plot inventory data form the Parc Naturel du Jorat


en: surface-mass-balance blowing-snow reproducibility antarctica cryowrf

en: Namelist and input files and information to run the WRF and CRYOWRF simulations used in the paper.

en: Python scripts to reproduces figures in Gerber et al., 2022, submitted.

en: Processed CRYOWRF output used for the analysis and the figures in the paper.

en: Static input data from the WRF simulations (used in the python scripts in Scripts_Reproducibility).

en: Processed WRF output (run with Noah-MP land surface model) used for the analysis and the figures in the paper.

en: Python scripts to reproduces figures in Gerber et al., 2022, revised

mimetype: application/x-zip-compressed

en:
This dataset contains data and scripts for "CRYOWRF - a validation and the effect of blowing snow on the Antarctic SMB" (Gerber et al., submitted).

* Simulation_setup: Namelists and input information to run the simulation. Some input files need to be downloaded from Sharma et a., 2021.
* Static_input: Static topography input file of WRF (geo_em.d01).
* WRF_27km_NoahMP: Preprocessed WRF output of the simulation run with the WRF using the surface parameterization Noah-MP to reproduce the figures and results in the paper.
* WRF_27km_CRYOWRF: Preprocessed WRF output of the simulation run with CRYOWRF to reproduce the figures and results in the paper.
* Scripts_Reproducibility: Python scripts to reproduce the figures and results in the paper.

Note:

* To run some of the scripts Atmospheric Weather station data needs to be prepared using Gerber and Lehning, 2022.
* AWS data is not provided and needs to be downloaded from the corresponding databases. Please make sure to comply with the respective terms and conditions.

antarctica

display_name: antarctica

blowing-snow

display_name: blowing-snow

cryowrf

display_name: cryowrf

reproducibility

display_name: reproducibility

surface-mass-balance

display_name: surface-mass-balance

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Reproducibility dataset for CRYOWRF validation


sensitivity-of-modeled-snow-instability

maintainer: Bettina Richter

title_for_slug: sensitivity-of-modeled-snow-instability

en: snow-cover-modeling snowpack global-sensitivity-analysis numerical-avalanche-forecasting snow-instability

en: Reference run

en: Reference run for the sensitivity analysis at Weissfluhjoch field site for winter season 2016-2017. Meteorological data from the automatic weather stations are used. No biases were introduced to the input data.

en: Case SL

en: Extracted output data for case SL. Here biases were introduced to meteorological input data during the period of slab formation. Data include quasi random biases, which were introduced, extracted output of simulated snow profiles and sobol indices for each output variable.

en: Case ALL

en: Extracted output data for case ALL. Here biases were introduced to meteorological input data during the whole simulation period. Data include quasi random biases, which were introduced, extracted output of simulated snow profiles and sobol indices for each output variable.

en: Case WL

en: Extracted output data for case ALL. Here biases were introduced to meteorological input data during the period of weak layer formation. Data include quasi random biases, which were introduced, extracted output of simulated snow profiles and sobol indices for each output variable.

en: Manually observed snow profiles

en: Manually observed snow profiles at Weissfluhjoch field site for winter season 2016-2017, including layer depth, hand hardness, grain size and grain shape for each layer.

en: We investigated the sensitivity of modeled snow instability to meteorological input data using SNOWPACK. We therefore used input data from the automatic weather station at the Weissfluhjoch field site for the year 2016-2017. We investigated three scenarios and performed 14'000 simulations for each scenario. The dataset contains extracted output data from modeled SNOWPACK simulations, including setup files to reproduce the simulations. For further information read the README file.

global-sensitivity-analysis

display_name: global-sensitivity-analysis

numerical-avalanche-forecasting

display_name: numerical-avalanche-forecasting

snow-cover-modeling

display_name: snow-cover-modeling

snow-instability

display_name: snow-instability

snowpack

display_name: snowpack

en: Sensitivity of modeled snow instability


en: chemistry snow-atmosphere-interactions ice laboratory-study atmosphere

en:
The table lists all NEXAFS raw data with the following columns:

* name:						raw file name
* xRayEkinRange_eV: 		Smallest and largest X-ray photon energy in eV
* scientaPassEnergy_eV: 	Pass energy of electron analyzer in eV
* scientaDwellTime_ms: 		Dwell time of electron analyzer in ms
* regionName:				O K-edge for all data
* scientaAcquisitionMode: 	Fixed energy (snapshot) mode
* scientaEkinRange_eV: 		Smallest and largest energy of the kinetic energy window used for detection in this work
* scientaEkinStep_eV		Not defined in fixed energy mode
* scientaLensMode:			Tune table
* scientaRegionIterations: 	Iterations (sweeps)
* scientaSequenceIterations: Iterations (sweeps)
* sampleTemp_dC: 			Temperature as monitored at the sample holder in °C
* cellPressure_mbar: 		Total pressure in measurement cell in mbar
* iceTemp_dC: 				Temperature of ice sample calculated based on vapour pressure (assuming total pressure equals partial pressure of water) in °C
* smplX_mm: 				positon of measurement spot, x dimension in mm
* smplY_mm: 				positon of measurement spot, y dimension in mm
* smplZ_mm: 				positon of measurement spot, z dimension in mm
* sealingTemp:				temperature at base of sample manipulator
* lastModifiedDatestr: 		time and date when data aquisition was finished
* sample: 					sample description

en: Processed data as shown in Figure 4 of publication. X-ray energy in eV in column one, electron count intensity in arb. units in column 2.

en: Near Ambient Pressure partial Auger-Meitner electron yield X-ray absorption spectra and photon flux data. X-ray energy in eV in column 1, analyzer electron count intensity in arb. units in column 2.

en: Data are compiled that have been used to demonstrate the impact of high water partial pressure on X-ray absorption spectra of ice.

atmosphere

display_name: atmosphere

chemistry

display_name: chemistry

ice

display_name: ice

laboratory-study

display_name: laboratory-study

snow-atmosphere-interactions

display_name: snow-atmosphere-interactions

educ

en: Education, culture and sport

en: An ice oxygen K-edge NEXAFS spectroscopy data set on gas-phase processing


en: chilling spongy-month budburst hatch phenology

en: Phenology and performance/preference tests Data

en:
-"Synchronex_Cuttings_Pheno.txt" provides the budburst date ('Stage 2') of each twig of the six studies species in the four different temperature treatments ("ambient", "a+5"=Ambient +5°C, 'Greenhouse-5'= Greenhouse at temperature >5°C, 'Greenhouse_10' = Greenhouse at temperature >10°C); 'Success' give the percentage of buds within the twig that succeeded to reach at least stage 2 during the experiment.

'Synchronex-Gypsy.txt' provides the number of eggs that have hatched at each monitoring date (Day of the year in columns); "DOY_hatch_1" corresponds to the first DOY when at least one egg has hatched; "Replicate_egg_mass" correspond to the egg mass replicate (1 to 5)

'PerformanceTest_GypsyMoth.txt' provides the biomass in mg of the caterpillars fed with fresh leaves of each tested tree species during one week. "Fresh_alive" is the biomass of only the living caterpillars after 1 week and "Freshpermoth" corresponds the weight per living caterpillar (Fresh alive/Nalive)

'PreferenceTest_All_species.txt' provides the total surface of leaf disc of each tested tree species remaining after exposing 5 caterpillars to these leaves during 24H. "Total_area" is the surface of the disc of each species measured after 24h exposed to the spongy moth first instars. For each species 'control' means the surface of the disc after 24H without any exposure to the larvae. 'EatenPercent correspond to the percentage surface loss compared to the control.

en: Temperature data Spongy moth experiment

en:
4 files with hourly temperature recorded at the height of buds in each of the four temperature treatments:
- Winter6: greenhouse where temperature was kept >6°C over winter
- Winter10: greenhouse where temperature was kept >10°C over winter
- OTC_Ambient: Open Top Chamber at Ambient temperature
- OTC_Warm: Open Top Chamber at +3.5°C warmer temperature

en: 3 R-Scripts used for the analyses of the temperature, phenology and performance/preference tests

en:
The files correspond to the data and R-script used for the analyses of the following paper "Feasting on the ordinary or starving for the exceptional: phenological synchrony between spongy moth and budburst of European trees in a warmer climate" published in Ecology and Evolution by Vitasse et al. 2023.
There are three zip files corresponding to the Temperature data, phenology/preference/performance tests and R-Scripts for the analyses.

Input data:
'Synchrony_Cuttings_Pheno.txt':

budburst

display_name: budburst

chilling

display_name: chilling

hatch

display_name: hatch

phenology

display_name: phenology

spongy-month

display_name: spongy-month

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Synchrony between spongy moth hatching and leaf phenology of temperate trees


maintainer: Florian Lustenberger

en: hydrology engineering estimation-methods flood decision-making

en:
(English version below)
Ziel dieser Faktenblätter ist es Informationen zu den Schätzmethoden, Hinweise zur Parametrisierung und eine grobe Einschätzung der Güte der Resultate in übersichtlicher Form bereitzustellen. Ein zeitaufwändiges Zusammensuchen dieser Informationen aus unterschiedlichen Quellen entfällt daher weitgehend. Die Bearbeitenden sollen damit in der Lage sein, sich innerhalb weniger Minuten die wichtigsten Hintergrundinformationen zu jeder der vorgestellten Methoden in Erinnerung zu rufen. Der Leitfaden unterstützt bei der Plausibilisierung und bei der Mittelung der Ergebnisse der einzelnen Schätzmethoden zu einem repräsentativen Endergebnis. Vorausgesetzt wird Grundwissen und Erfahrung in der Thematik.
Der Leitfaden führt die Fachperson anhand eines Entscheidungsbaums in acht Schritten durch den Arbeitsablauf und unterstützt mit einem Fragenkatalog bei der Plausibilisierung der Ergebnisse.
Auf den Faktenblättern sind für jede Schätzmethode alle relevanten Informationen stichwortartig und grafisch übersichtlich auf einer DIN-A4 Seite zusammengefasst. Jedes Faktenblatt ist einheitlich gegliedert.
The aim of these fact sheets is to provide information on the flood estimation methods, notes on their parameterization and a rough assessment of the quality of the results in a clear form. A time-consuming research for this information from different sources is therefore largely eliminated. The users should be able to recall the most important background information on each of the methods presented within a few minutes. The guide provides support in checking plausibility and averaging the results of the individual estimation methods to produce a representative final result. Basic knowledge and experience in the subject are assumed.
The guide leads the expert through the workflow in eight steps using a decision tree and supports the plausibility check of the results with a list of questions.
On the fact sheets, all relevant information for each estimation method is summarized with key words and graphics on one DIN A4 page. Each fact sheet has a standardized structure.

decision-making

display_name: decision-making

engineering

display_name: engineering

estimation-methods

display_name: estimation-methods

flood

display_name: flood

hydrology

display_name: hydrology

en: Faktenblätter und Leitfaden für Hochwasserschätzmethoden in der Praxis


maintainer: Axel Volkwein

en: trajectory field-test mass-movements rockfall experiment experiments field-tests natural-hazards field-data

en: Block trajectories recorded from local positioning system

en: This file contains more than 80 rockfall trajectories projected onto the terrain, i.e. the positions of the single blocks over time during the single tests that were recorded by the local positioning system with about 10Hz. It contains the detected positions as well as a smoothened path (see Volkwein et al., Geosciences, 2018). The table also contains the derived velocities and accelerations along the slope (attention: these accelerations are the once that occur during an impact).

en: These data contain the point clouds obtained from laser scanning the test slope and the six test blocks used for the experiments. The coordinates of the slope are given in CH-1903 format. The coordinates of the block point clouds are kept in a lokal x/y/z coordinate system.

en: Overview of all tests

en:
This table gives an overview on all tests performed including
- block used
- start & end position
- number of jumps
- etc.
-

en: Jumps and impacts

en: This table contains data of more than 2200 of each jumps and impacts of the test blocks on a grassy slope. It gives there durations in combination with acting accerlartions and the rotational speed of the blocks. The data were retrieved using the block internal accelerometer and rotation sensors. The combination of these data with the measurement from the local positioning system allows the deduction of jump lengths, slope gradient etc.

en:
In summer 2014, 6 rock blocks between 20 and 80kg have been thrown in total 111 times down a slope at the Swiss Oberalppass close to the village Tschamut. The slope was mainly covered by grass and its lower part was flat and large enough to provide natural runouts of the single trajectories.

An extensive measurement program has been set up to measure the block trajectories: With surveyor's instruments the slope and the six used rock blocks were scanned and the start and end positions of each test were recorded. During the single events two cameras filmed the trajectories. A special sensor device located within the blocks recorded the acting accelerations and rotational speeds over time. Further, the device emitted a Wifi signal that got detected from eight receivers around the slope. Based on this signal the block position has been recorded over time.

The dataset contains all data that were gathered through above field campaign.

experiment

display_name: experiment

experiments

display_name: experiments

field-data

display_name: field-data

field-test

display_name: field-test

field-tests

display_name: field-tests

mass-movements

display_name: mass-movements

natural-hazards

display_name: natural-hazards

rockfall

display_name: rockfall

trajectory

display_name: trajectory

en: Repetitive trajectory testing in Tschamut 2014


maintainer: Izabela Bujak-Ozga

en: stream-water catchment-data solutes hydrogen-isotopes oxygen-isotopes catchment groundwater

en: This document provides a detailed description of the hydrochemical dataset, including, among other things, an overview of the dataset content, an explanation of the column headers, a description of the locations where samples were collected, and an explanation of the abbreviations used in the dataset.

en: This dataset includes mean concentrations of solutes (Calcium, Iron, Magnesium, Sodium, Potassium, Boron, Nitrate, Sulfate, and Chloride) and stable isotope values (hydrogen and oxygen) in water molecules. These were measured in precipitation, groundwater, soil water, and surface water samples collected from the Haute-Mentue catchment in Switzerland during Spring and Fall 2022. Detailed information is available in the accompanying documentation (documentation_for_the_hydrochemical_data_collected_during_spring_fall_2022_in_the_haute-mentue_catchment.pdf).

en: The dataset contains hydrochemical data collected from spring to fall 2022 in the Haute-Mentue catchment, Switzerland. This hydrochemical data includes solute concentrations and stable isotopes of oxygen and hydrogen in water molecules, measured in streamwater, soil water, groundwater, and rainfall samples. Samples were collected during eight rainfall events with higher temporal resolution (hourly) as well as at lower resolution between events. A detailed description of the dataset is provided in the documentation.

catchment

display_name: catchment

catchment-data

display_name: catchment-data

groundwater

display_name: groundwater

hydrogen-isotopes

display_name: hydrogen-isotopes

oxygen-isotopes

display_name: oxygen-isotopes

solutes

display_name: solutes

stream-water

display_name: stream-water

educ

en: Education, culture and sport

en: Hydrochemical Data Collected during Spring-Fall 2022 in the Haute-Mentue Catchment


maintainer: Rebecca Mott

en: dischmex snow-patch patchy-snow-covers turbulent-sensible-heat-fluxes eddy-covariance-measurements

en: Gletschboden setup

media_type: image/png

en: Background map based on data © 2014/2016 swisstopo (JD100042)

format: PNG

mimetype: image/png

en: Eddy-covariance measurement with an ultrasonic anemometer (CSAT3, Campbell Scientific Inc.) in 3.2 m on a daily basis.

en: Eddy-covariance measurement with an ultrasonic anemometer (DA-600, Kaijo-Denki) in 0.3 m on a daily basis.

en: Eddy-covariance measurement with an ultrasonic anemometer (R.M. Young Company) in 0.7 m.

en: Eddy-covariance measurement with an ultrasonic anemometer (CSAT3, Campbell Scientific, Inc.) in 2.2 m.

en: Eddy-covariance measurement with an ultrasonic anemometer (R.M. Young Company) in 3.3 m.

en: Eddy-covariance measurement with an ultrasonic anemometer (CSAT3, Campbell Scientific, Inc.) in 2.6 m.

en: Eddy-covariance measurement with an ultrasonic anemometer (R.M. Young Company) in 3.5 m.

en: Output explanation

en: Eddy-covariance measurement with an ultrasonic anemometer (CSAT3, Campbell Scientific Inc.) in 1.7 m on a daily basis.

en:
This dataset contains eddy-covariance measurements in the ablation period of 2014-2016. Measurements were taken from two turbulence towers over a long-lasting snow patch, which are 5 m apart from each other (2014 and 2015). The turbulence towers were equipped with two YOUNG ultrasonic anemometers mounted 0.7 m (in 2014) and 3.3 m (in 2015) above snow-free ground, two ultrasonic anemometers (CSAT3, Campbell Scientific, Inc.) mounted at 2.6 m (in 2014) and 2.2 m (in 2015) above snow-free ground and one anemometer (DA-600, Kaijo Denki) mounted at 0.3 m above snow surface.

The measurement setup changed in 2016 and includes a measurement above the snow-free ground in upwind direction (Swiss coordinates: 790191/176689). The measurement tower is equipped with one ultrasonic anemometer (CSAT3, Campbell Scientific, Inc.) in 3.3 m above the snow-free ground. Additionally, one measurement tower is installed above the long-Lasting snow patch and equipped with the same setup as 2015.

Turbulence data were sampled at a frequency of 20 Hz. The processing of the data to quality controlled fluxes has been done with the Biomicrometeorology flux software (Thomas et al., 2009). The program applies plausibility tests and a despiking test after Vickers and Mahrt (1997) on the measured data. The routine further applies a time-lag correction and considers the deployment (e.g. the sonic azimuth). A frequency response correction (Moore, 1986) is done and a three-dimensional rotation is performed. Finally, quality assurance/quality control (QA/QC) flags after Foken et al., (2004) are issued and fast Fourier transform power and co-spectra are calculated. The change in snow height is considered in the post-processing for every measurement day. The turbulence data were averaged to 30 minute intervals.

dischmex

display_name: dischmex

eddy-covariance-measurements

display_name: eddy-covariance-measurements

patchy-snow-covers

display_name: patchy-snow-covers

snow-patch

display_name: snow-patch

turbulent-sensible-heat-fluxes

display_name: turbulent-sensible-heat-fluxes

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: DISCHMEX - Impact of extreme land-surface heterogeneity on micrometeorology over spring snow-cover


maintainer: Michael Lehning

en: weissfluhjoch paleoclimate post-depositional-processes natural-tracer snow sublimation latent-heat stable-water-isotopes

en: Weather

en: Meteorological data, snow height measurement, and SNOWPACK simulations covering the different field campaigns.

en: Stable water isotopes in snow

en: Stable water isotopes in snow measurements

en: Stable water isotopes in vapor

en:
Stable water isotopes in vapor measurements. Processed (calibrated) and raw data for February - June 2017. Raw data for January and February 2020.
For the time in between July 2017 and April 2020, raw vapor isotopic measurements are available, but no calibrations were performed during that time. For data delivery, please contact one of the authors.
This folder also contains the post-processing scripts for stable water isotopes in vapor measurements.

en:
Details on the data collected during the different field campaigns and available in this dataset.
Information on the sampling procedure of the snow isotopes samples.

en: Details about the different folders

en:
Notice: Changes to the dataset are still possible. Please do not use this dataset until the final publication with a DOI. Contact the authors if you have questions about this.

This dataset contains measurements of stable water isotopes in snow and vapor on the Weissfluhjoch from different field campaigns (Winter 2017 (Trachsel, 2019), January 2020, December 2020, and March 2021 (Sadowski et al., 2022).
Snow profiles and surface samples are available at different frequencies for each campaign. Please see "Data_description.pdf" for details.

Scripts and SNOWPACK simulations used in (Trachsel, 2019) and (Sadowski et al., 2022) are also provided.

latent-heat

display_name: latent-heat

natural-tracer

display_name: natural-tracer

paleoclimate

display_name: paleoclimate

post-depositional-processes

display_name: post-depositional-processes

snow

display_name: snow

stable-water-isotopes

display_name: stable-water-isotopes

sublimation

display_name: sublimation

weissfluhjoch

display_name: weissfluhjoch

educ

en: Education, culture and sport

en: Stable Water Isotopes in snow and vapor on the Weissfluhjoch


en: snow-temperature weissfluhjoch snowmicropen water-front snow-stratigraphy ice-layers

en: WFJ_ICE_LAYERS dataset

en: README

media_type: text/plain

format: TXT

mimetype: text/plain

en: The WFJ_ICE_LAYERS dataset contains multi-instrument snowpack measurements at high temporal resolution, which enable to monitor the formation of deep ice layers due to preferential water flow, at the Weissfluhjoch research site, Davos, Switzerland. It covers the winter 2016/2017, with a focus on the early melting season. This dataset includes traditional snowpack profiles (weekly resolution, 15/11/2016-29/05/2017), SnowMicroPen penetration resistance profiles (daily resolution, 01/02/2017-19/04/2017), snow temperatures measured at different heights in the snowpack (half-hourly resolution, 01/03/2017-15/04/2017) and the water front height derived from an upward-looking ground penetrating radar (3-hour resolution, 04/03/2017-08/04/2017). The measurements are complemented by initialization files for SNOWPACK model simulations with the ice reservoir parameterization at Weissfluhjoch for the winter 2016/2017.

ice-layers

display_name: ice-layers

snow-stratigraphy

display_name: snow-stratigraphy

snow-temperature

display_name: snow-temperature

snowmicropen

display_name: snowmicropen

water-front

display_name: water-front

en: WFJ_ICE_LAYERS: Multi-instrument data for monitoring deep ice layer formation in an alpine snowpack


en: extreme-events potential-evapotranspiration megadrought drought multi-year-drought chelsa precipitation

en: Standardised Precipitation Evapotranspiration Index (SPEI)

en: Global monthly layers of the Standardized Precipitation Evapotranspiration Index (SPEI) a 30 arcsec (~1km) spatial resolution

en: Standardized Precipitation Index (SPI)

en: Global monthly layers of the Standardized Precipitation Index (SPI) a 30 arcsec (~1km) spatial resolution

en: Kernel Normalized Difference Vegetation Index Anomaly (QKNDVI)

en: Global annual layers of the the kernel normalized difference vegetation index anomaly (qkndvi) at a 1/12° (~10km) spatial resolution.

en: Technical documentation document including the variable names, units, scaling, offset, and background.

en: Multiyear meteorological droughts (MYMD10) statistics - Description

en: Description of column names, and units of the fields contained in the dataset "Multiyear meteorological droughts (MYMD10) statistics".

en: Statistics of the multiyear meteorological droughts, containing the ID, duration, area, and empirical ranking of the droughts.

en: Multiyear meteorological droughts (MYMD) statistics - Description

en: Description of column names, and units of the fields contained in the dataset "Multiyear meteorological droughts (MYMD) statistics".

en:
Multiyear meteorological droughts (MYMD10) statistics
Statistics of the multiyear meteorological droughts, containing the ID, duration, area, and empirical ranking of the droughts, and the anomalies in kNDVI

en: Global annual layers of the multiyear meteorological droughts (MYMD) at a 1/12° (~10km) spatial resolution

en: Global annual layers of the multiyear meteorological droughts (MYMD) at a 1/24° (~5km) spatial resolution

en:
The dataset consists of the standardized precipitation (SPI) and the standardized precipitation evapotranspiration index (SPEI) index with a 30 arcsec (~1km) horizontal resolution.
Data for precipitation rates (pr) and potential evapotranspiration (pet) are taken from CHELSA V2.1 (https://doi.org/10.16904/envidat.228.v2.1). Both data sets are monthly time series from 1980 to 2018 at 30 arcsec. and have the unit of kg m-2 month-1. SPEI is a more reliable measure of drought than SPI as it additionally considers the effect of potential evapotranspiration. Potential evapotranspiration (pet) is the amount of water per area per time that can evaporate at the soil surface or be transpired by plants in absence of water supply limitations. SPEI effectively estimates for a given location how the climatic water balance, i.e., the difference between precipitation rate (pr) and potential evapotranspiration (pet), relates to the long-term mean. Here, pet was calculated with the Penman-Montheith approach, assuming surface conductance of a reference crop of 12 cm height following the definition of the Food and Agriculture Organization of the United Nations (FAO), originating from CHELSA-BIOCLIM+ database (https://www.doi.org/10.16904/envidat.332). To obtain global time series of SPEI, in each pixel the frequency distribution of water balance estimates (pr-pet) is approximated with a log-logistic probability distribution function. We calculate monthly SPEI using a 12-month memory and approximate the parameters of the log-logistic probability distribution based on the time series from 1980-2018. Such a 12-month time window is suitable to capture long-term drought events that are long enough to impose substantial impacts on agriculture, hydrology, and ecosystems while ones at shorter time scales would be more appropriate to detect short-term drought. For each month, SPEI is calculated considering the respective water-balance value and the values of the eleven preceding months. Here we use SPEI-12 in December to represent the overall water-balance condition of the respective year. The resulting SPEI data has a horizontal resolution of 130 arcsec (~1km). The calculation of SPI and SPEI is done in R with the package SPEI (https://www.doi.org/10.32614/CRAN.package.SPEI).

chelsa

display_name: chelsa

drought

display_name: drought

extreme-events

display_name: extreme-events

megadrought

display_name: megadrought

multi-year-drought

display_name: multi-year-drought

potential-evapotranspiration

display_name: potential-evapotranspiration

precipitation

display_name: precipitation

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: High resolution global standardized drought indices


maintainer: Athanasios Nenes

en: supersaturation raclets cloud-droplets weissfluhjoch ccn dmt-ccn-chamber hygroscopicity cloud-modeling sigma-w

en: CCN data Weissfluhjoch

en:
In-situ CCN measurements were conducted between February 24 and March 8 2019 at Weissfluhjoch. The data file contains:

* Date and time (DD/MM/YYYY hh:mm:ss) in UTC
* Filtered CCN number concentrations (in cmˉ³) measured at 6 discrete supersaturations (SS) ranging from 0.09% to 0.74%. The name of each CCN column is indicative of the SS developed within the instrument.
* Instrument characteristics such as sample temperature (in °C) and pressure (in mbar)
* A code that refers to the reason of filtering.

Missing or filtered CCN values are indicated by "-999", while a declaration of each "Error_code" can be found in the following list:

_Error_code_:

0000: Measurements without error

1000: Period of transient operation after a supersaturation change

2000: Sharp change (decrease) in the room temperature housing the instrument, which induces a reset in column temperature

3000: Irregular values in the room temperature housing the instrument

9999: Missing data

mimetype: text/csv

en: Predicted cloud droplet number concentrations Weissfluhjoch

en:
In-situ measurements of aerosol size distributions along with updraft velocities collected from a wind Doppler Lidar are coupled with a state-of-the art droplet activation parameterization (Morales and Nenes, 2014) to determine the cloud droplet number and maximum in-cloud supersaturation that can potentially form over the Weissfluhjoch station between February 24 and March 8 2019. For this, a hygroscopicity parameter of 0.25 is assumed, according to the CCN-derived values. The data file contains:

* Date and time (DD/MM/YYYY hh:mm:ss) in UTC
* The wind-lidar derived standard deviation of updraft velocities (sigma-w) in m/s, used to apply the parameterization employing a single characteristic velocity (Morales and Nenes, 2010)
* The maximum predicted cloud parcel supersaturation (Smax%)
* The total in-situ aerosol number concentration (Naer) in cmˉ³, measured by the SMPS
* The predicted cloud droplet numbers (Nd) in cmˉ³
* The activation fraction (%)

en: Hygroscopicity parameter Weissfluhjoch

en:
The aerosol hygroscopicity parameter is derived combining the CCN and SMPS size distribution data collected between February 24 and March 8 2019 at Weissfluhjoch. The data file contains:

* Date and time (DD/MM/YYYY hh:mm:ss) in UTC
* The instrument supersaturation (SS%)
* The calculated hygroscopicity parameter (kappa)
* The calculated critical dry diameter of the particles (Dcr) in nm.

Missing values are indicated by "-999".

en:
Cloud Condensation Nuclei (CCN) data: A Droplet Measurement Technologies (DMT) single-column continuous-flow streamwise thermal gradient chamber (CFSTGC; Roberts and Nenes, 2005) was deployed at the measurement site Weissfluhjoch (2700 m a.s.l., LON: 9.806475, LAT: 46.832964) to record the in-situ CCN number concentrations between February 24 and March 8 2019 for different supersaturations (SS). To account for the difference between the ambient (~735 mbar) and the calibration pressure (~800 mbar), the SS reported by the instrument is adjusted by a factor of 0.92. The CFSTGC was cycled between 6 discrete SS values ranging from 0.09% to 0.74%, producing a full CCN spectrum every hour. The raw CCN measurements are filtered to discount periods of transient operation and whenever the room temperature housing the instrument changed sufficiently to induce a reset in column temperature. Additional information can be found in Section 2.1.2 [here](https://acp.copernicus.org/preprints/acp-2020-1036/).

Hygroscopicity data: The CCN number concentration measurements were directly related to the size distribution and total aerosol concentration data measured by the Scanning Mobility Particle Size Spectrometer (SMPS) instrument at the same station (https://www.envidat.ch/dataset/aerosol-data-weissfluhjoch) to infer the particles hygroscopicity parameter (kappa). For each SMPS scan, the particles critical dry diameter (Dcr) is estimated by integrating backward the SMPS size distribution, until the aerosol number matches the CCN concentration observed for the same time period as the SMPS scan. Assuming the particle chemical composition is internally mixed, the kappa is determined from Dcr and SS, applying Köhler theory. Additional information can be found in Section 2.2 [here](https://acp.copernicus.org/preprints/acp-2020-1036/).

Predicted cloud droplet numbers: Droplet calculations are carried out with the physically based aerosol activation parameterization of Morales and Nenes (2014), employing the “characteristic velocity” approach of Morales and Nenes (2010). Aerosol size distribution observations required to predict the cloud droplet numbers and maximum in-cloud supersaturation are obtained from the SMPS instrument deployed at Weissfluhjoch. The required vertical velocity measurements are derived from the wind Doppler Lidar (https://www.envidat.ch/dataset/lidar-wind-profiler-data) deployed at Davos Wolfgang and are extracted for the altitude of interest, being 1100 m above ground level for Weissfluhjoch. Additional information can be found in Section 2.3 [here](https://acp.copernicus.org/preprints/acp-2020-1036/).

ccn

display_name: ccn

cloud-droplets

display_name: cloud-droplets

cloud-modeling

display_name: cloud-modeling

dmt-ccn-chamber

display_name: dmt-ccn-chamber

hygroscopicity

display_name: hygroscopicity

raclets

display_name: raclets

sigma-w

display_name: sigma-w

supersaturation

display_name: supersaturation

educ

en: Education, culture and sport

en: CCN, hygroscopicity, predicted cloud droplet numbers Weissfluhjoch


en: concur landscape-planning urban-planning urban-landscape land-change

en:
Book of abstracts from the virtual conference "From Plans to Land Change: Dynamics of Urban Regions"

Cities and urban regions are among the most dynamic land-use systems in the world, with dramatic consequences for the provision of ecosystem services and the livelihood of people. Planning is a multifaceted activity with extensive experience in the management of these urbanization processes. However, our understanding of planning’s contribution to shaping urban land use, form and structure is still incomplete, with serious consequences for the efficacy of urban planning and land change models.

This international conference aims to bring together the community of scholars working on planning evaluation and urban modelling. The participants are offered the opportunity to present their current research and to discuss how theoretical developments, data sources, comparative studies and modelling approaches might advance the field.

The conference was financially supported by the CONCUR project and sustained by Swiss Federal Research Institute WSL.

concur

display_name: concur

land-change

display_name: land-change

landscape-planning

display_name: landscape-planning

urban-landscape

display_name: urban-landscape

urban-planning

display_name: urban-planning

en: From Plans to Land Change: Dynamics of Urban Regions. Book of Abstracts


figures-perspective-urban-beekeeping

maintainer: Joan Casanelles

title_for_slug: figures-perspective-urban-beekeeping

en: hymenoptera insects diversity-distributions urban-beekeeping urban-ecology wildbees

en: R script for the figures V2

en: R script for the figures

format: OCTET

en: Proportion urban honeybees and wildbees

en:
The dataset contains the proportion of wildbees and honeybees in the different studies obtained from the literature review.
Article_ID: ID for each article
DOI
Authors
Year: publication year
Duration sampling (years): numerical
Start_sampling: numerical, date
End_sampling: numerical, date
Continent
Country
N. cities: number of cities sampled in the article. Numerical.
City
Sampling type: categorical. Levels: active (e.g., Hand-netting); passive (e.g., pantraps. trap-nests); both (combination of passive and active methods).
Sampling methodology: categorical. Levels: direct observations, hand-netting, pantraps, interception traps, vane traps.
Number sites: total number of study sites.
Abundance honeybees: number of honeybees recorded
Abundance wild bees: number of wildbees recorded
Total bees: total number of bees recorded.
Proportion honeybees: Abundance of honeybees / Total number of bees
Proportion wildbees: Abundance of wildbees / Total number of bees

en: Proportion honeybees and wildbees

en: Outdated, use the new resource "Propotion urban honeybees and wildbees"

en: DEPRECATED. Data growth urban beekeeping

en: DEPRECATED. Distirbution beehives among beekeepers

en: The dataset contains the number of beehives per registered beekeeper ID (annonymised) in four Swiss cities (Bern, Lausanne, Geneve, Zurich).

en: NDVI values within 3 buffers  in hives in Zurich

en:
The dataset contains the average NDVI values around beehives in Zurich at three spatial scales (250, 500 and 1000 m). It contains 3 columns_
- buffer: indicating the spatial scale
- ID: hive ID (annonymised)
- mean.NDVI: mean NDVI value

en: Coordinates studied cities

en: Coordinates (LatLon format) of the cities where data from urban bee ecology studies was used.

en: Data rank-abundance distribution urban bees

en: Outdated, use the new resource

en: Results literature review

en:
 The file shows the results from the literature review. Briefly, we searched papers using google scholar search engine using the following query: (“WILD BEE OR WILDBEE”)(“URBAN” OR “CITY”), and limited the time span from 2010-2023. The search query returned 200 candidate papers. In addition, we complemented the candidate papers from the literature research performed by Ferrari & Polidori (2022), adding 22 additional candidate papers. To select papers, we checked that (1) were conducted in urban areas; (2) sampled the whole bee community; (3) provided data on abundance of wildbees; (4) provided data on honeybees; and (5) provided individual abundance data of each wild bee species.
The dataset contains the following:
-Article_ID: ID for the specific article in the form "A1", "A2"..."An"
- Title: of the article
- Year: of publication
- Journal: of publication
- Publisher:
- Link: link to the publication
- DOI: when applicable
- Total abundance wild bees reported: was the total number of collected bees reported? Logical (Y/N)
- Honey bee abundance reported: was thenumber of honeybees collected reported? 	Logical (Y/N)
- Abundance per wild bee species: was the number of wildbee species sampled provided? Logical (Y/N)
- Select proportion: paper selected to calculate the proportion of honeybees and wildbees.
- Select RAD: paper selected to compute the rank-abundance distribution diagram
Comment: comments on the papers, data availability, etc.

en: R script for the figures V1

en: Deprecated version of the R script

en: Local overheating values within 3 buffers in hives in Zurich

en:
The dataset contains the average overheating values around beehives in Zurich at three spatial scales (250, 500 and 1000 m). It contains 4 columns:
- buffer: indicating the spatial scale
-ID: hive ID (annonymised)
- mean.overwarming: mean overheating value, expressed in degrees Kelvin
-mena.overwarming.cor = transformed values do degrees Celsius

en: Data growth urban beekeeping

en:
The dataset contains the data of the growth of urban beekeeping in different cities.
For each city in a given year, it contains the following:
Continent.
Country.
City: the name of the city
Year: the year when the information was collected
Area: of the city
Total N. beekeepers: when available, the estimated number of beekeepers in that city for that given year
Total N. hives: when available, the estimated number of beehives in that city for that given year
Density: the total number of hives divided by the city area
Reference: the source of the information.

en: Distribution beehives among beekeepers

en: The dataset contains the number of beehives per registered beekeeper ID (annonymised) in four Swiss cities (Bern, Lausanne, Geneve, Zurich) and Paris.

en: Species-abundance data

en:
Abundance data at the species level per used dataset for the rank abundance distribution (RAD).
40 datasets used.

en:
Data and code from the perspective paper "When honeybees comes to town"
The .r file provides the code to generate the figures.
In addition, this repository contains the data for the figures 1-3.
For Figure 4, part of the data is confidential, Please, refer to the contacts provided:
- For the distribution of hives in Zurich (2018): https://www.zh.ch/de/gesundheitsdirektion/veterinaeramt.html
- For the overheating map of Zurich: Prof. Dr. Eberhard Parlow / Stadt Zurich (https://www.zh.ch/de/umwelt-tiere/umweltschutz/umweltpraxis/definitionsseite/2012/68/zup068_2012_a0030_klimaanalyse-pdf.html)

diversity-distributions

display_name: diversity-distributions

hymenoptera

display_name: hymenoptera

insects

display_name: insects

urban-beekeeping

display_name: urban-beekeeping

urban-ecology

display_name: urban-ecology

wildbees

display_name: wildbees


maintainer: Stephan Zimmermann

en: calcium potassium magnesium fagus-orientalis-lipsky biogeochemical-cycling

en: Concentrations of Ca, Mg, K, and Na in throughfall, litterflow and soil solution of a Hyrcanian forst in Northern Iran

en:
Throughfall, litterflow and soil solution were sampled during one whole year under five Oriental beech trees in a mixed Hyrcanian beech forest. The amounts of Ca2+, Mg2+, K+ and Na+ in these fluxes were calculated based on their concentrations and the sampled volumes, and subsequently compared with the respective fluxes in the rainfall and soil solution of an adjacent forest gap.
In addition six soil profiles, one close to every single tree and one in the forest gap, were analyzed for pH, CaCO3, organic matter and texture.

biogeochemical-cycling

display_name: biogeochemical-cycling

calcium

display_name: calcium

fagus-orientalis-lipsky

display_name: fagus-orientalis-lipsky

magnesium

display_name: magnesium

potassium

display_name: potassium

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Base cation dynamics in an Oriental beech forest


maintainer: Yves Bühler

en: dsm uav snow-depth-mapping wingtra photogrammetry drone-data orthophoto

en: Data Access

en:
- DSM (10 cm resolution)
- Ortho (3 cm resolution)
- HS (10 cm resolution)
- original RGB drone images
- Agisoft Metashape Processing Report

All products are also available as a cloud optimized geotiff.

en: To map and assess snow depth on different dates, 9 flights were conducted in the winter season of 2020/21 at the Latschüelfurgga in Davos. The data was captured with a Sony RX1R II mounted on a Wingtra drone and was processed with the Agisoft Metashape software. High-resolution DSMs, orthomosaics and snow height rasters, as well as the original RGB images from each flight are available.

drone-data

display_name: drone-data

dsm

display_name: dsm

orthophoto

display_name: orthophoto

photogrammetry

display_name: photogrammetry

snow-depth-mapping

display_name: snow-depth-mapping

uav

display_name: uav

wingtra

display_name: wingtra

en: Photogrammetric Drone Data Latschuelfurgga


en: mountains climate-indicators european-alps meteorological-data climate-change europe forest-fire climate fire indicator-values

en: Data access

en: This dataset contains the Fire Weather Index for Hydrological Bavaria from 1980 - 2099 as stated in the paper "Climate change impacts on regional fire weather in heterogeneous landscapes of Central Europe" published in Natural Hazards and Earth System Sciens (NHESS) 2023. The dataset contains daily Fire Weather Index values for all 50 members (subfolders of the dataset) of the CRCM5-LE (11 km spatial resolution) from 1980 to 2099 over the domain of Hydrological Bavaria. Please cite this dataset as the publication: Miller, J., Böhnisch, A., Ludwig, R., & Brunner, M. I. (2023). Climate change impacts on regional fire weather in heterogeneous landscapes of Central Europe. Natural Hazards and Earth System Sciences Discussions, 1-25. doi: 10.5194/nhess-2023-51.

climate

display_name: climate

climate-change

display_name: climate-change

climate-indicators

display_name: climate-indicators

europe

display_name: europe

european-alps

display_name: european-alps

fire

display_name: fire

forest-fire

display_name: forest-fire

indicator-values

display_name: indicator-values

meteorological-data

display_name: meteorological-data

mountains

display_name: mountains

en: Fire Weather Index for Hydrological Bavaria from 1980-2099 derived from the 50 member CRCM5-LE


intratrait

maintainer: Christian Rixen

title_for_slug: intratrait

en: climate-change plant-traits cold-adapted-plants neighbour-interactions elevation-gradient elevation-range

en: Plant trait data along elevation gradients on mountains

en:
This data set was used to test whether species specialized to high elevations or with narrow elevational ranges show more conservative (i.e. less variable) trait responses across their elevational distribution, or in response to neighbours, than species from lower elevations or with wider elevational ranges. We did so by studying intraspecific trait variation of 66 species along 40 elevational gradients in four countries (Switzerland, Australia, New Zealand, China) in both hemispheres. As an indication of potential neighbour interactions that could drive trait variation, we also analysed plant species’ height ratio, its height relative to its nearest neighbour.
The following traits and parameters were measured and are available in this data set:
As an indication of plant stature, we measured vegetative and generative height, where vegetative height was distance from soil to highest vegetative leaf and generative height was distance to the highest point on the reproductive shoot. As a measure of reproductive investment, we noted the presence of flowers on the randomly chosen individuals (see below). As a measure of individual and genet basal area, we measured individual plant and patch diameters, in two dimensions (along the largest diameter and perpendicular to it). In clonal plant species, plant diameter was equivalent to an individual rosette, whereas patch diameter referred to the whole genet and could represent the size of a tuft, tussock or cushion. For genera with more singular growth forms (e.g., some Gentiana species) plant and patch diameter were the same. The two diameter measurements were made at right angles, allowing estimates of patch and plant areas to be calculated as an ellipse (i.e., area = 0.5 a 0.5 b Π). All traits were measured on ten randomly selected individuals per site. Flower count data was considered in a binary fashion on a per individual basis (because for some species individuals only produce one flower when flowering) so that the presence or absence of flower(s) was a nominal value between 0 and 10 for each species at each site. We then collected at least three leaves (up to 30 for small and light leaves) from each of the first three individuals selected from each species for determination of leaf dry matter content (LDMC) and specific leaf area (SLA). For calculations of LDMC and SLA, fresh leaves were scanned on a flatbed scanner to determine leaf area. Leaves were then weighed on a balance to a precision of +/- 0.001g, prior to being air dried and reweighed with a balance to a precision of +/- 0.0001g. LDMC was calculated by dividing dry leaf mass by fresh leaf mass. SLA was calculated by dividing leaf area by dry leaf mass. Additionally, within an area of 10 cm diameter around the target individual, we determined the tallest neighbouring species and measured its vegetative and generative height, and estimated the percent cover of the target species, other vegetation, rock, and bare soil.
For more details see Rixen et al. 2022, Journal of Ecology.

cold-adapted-plants

display_name: cold-adapted-plants

elevation-gradient

display_name: elevation-gradient

elevation-range

display_name: elevation-range

neighbour-interactions

display_name: neighbour-interactions

plant-traits

display_name: plant-traits

en: intratrait


maintainer: Thorsten Bartels-Rausch

en: laboratory-study polar cryosphere arctic sea-salt-aerosol antartic snow

en: Experimental results of uptake coefficient vs. temperature and ozone concentration

en:
Data to Figure 3: Measured uptake coefficients as a function of temperature at 5E12 molecules per cm3 ozone concentration.

Data to Figure 6: Measured uptake coefficients at different temperatures as a function of gas- phase ozone concentration.

en: Experimental Results: Uptake coefficients vs. temperature and ozone concentration

en:
* Final Data to Figure 3: Uptake coefficients as a function of temperature at 5E12 molecules per cm3 ozone concentration.
* Final Data to Figure 6: Uptake coefficients at different temperatures as a function of gas- phase ozone concentration.

The average ozone uptake coefficients of the three cycles between the bypass and the flow tube per repeat is taken as the mean uptake coefficient for each experiment. Gamma was corrected for gas phase diffusion limitation following the Cooney–Kim– Davis (CKD) method52 (see supporting material of publication for details).

en: The reaction of ozone with bromide in polar regions results in the formation of reactive bromide species with impacts on ozone budget and the oxidative capacity of the lower atmosphere. Here, we present a data investigating the temperature dependence of bromide oxidation by ozone using a coated wall flow tube reactor coated with an aqueous mixture of citric acid and sodium bromide, a proxy for sea salt aerosol in snow or the free troposphere. Thus study shows the effect of of organic species at relatively mild temperatures between the freezing point and eutectic temperature as typical for Earth's cryosphere.

antartic

display_name: antartic

arctic

display_name: arctic

cryosphere

display_name: cryosphere

laboratory-study

display_name: laboratory-study

polar

display_name: polar

sea-salt-aerosol

display_name: sea-salt-aerosol

snow

display_name: snow

educ

en: Education, culture and sport

en: Kinetic experiments on the oxidation of bromide by ozone from 289-245 K.


maintainer: Irmi Seidl

en: renewable-energy switzerland energy-cooperatives community-energy cooperatives

en: Raw date (SPSS)

en: Raw data in sav. format (SPSS). For comprehension of the data and variable structure, please consult the modified questionnaire with variable names.

en: Codebook

en: Description of variable attributes and valid n

mimetype: application/pdf

en: Raw data (.csv)

en: Raw data in csv. format. For comprehension of the data and variable structure, please consult the codebook and the modified questionnaire with variable names.

en: Questionnaire with variable names

en: Modified questionnaire with variable names for each item. Should be used together with the data files (.csv or .sav) to reconstruct the data and variable structures.

en:
 Topic of Survey
The data at hand on energy cooperatives in Switzerland were collected in 2016 as part of the project "Collective financing of renewable energy projects in Switzerland and Germany" of the National Research Programme 71 "Managing Energy Consumption". The cooperatives were surveyed on their organizational structure, their activities in electricity and heat generation, their finances, the political context and their assessments of the future.

 Survey Method
The survey was targeted at all energy cooperatives in Switzerland (this is the basic population). The Swiss Commercial Register was searched for cooperatives and specific keywords in order to determine this basic population and collect addresses. This search in May 2016 resulted in a total of 304 energy cooperatives, to which a questionnaire was sent in July 2016. A pre-test with 8 persons had been carried out before the questionnaire was sent out. The questionnaire was provided in German and French. It was sent by mail and an attached letter referred to a link for the digital version if preferred. The online version was designed with the software "Sawtooth". After three weeks, a first, and after six weeks a second reminder letter was sent to those cooperatives that had not yet completed the questionnaire. The returned hardcopy questionnaires were manually entered into the database and then combined with the electronic data from the online survey. In the course of the survey, the total population was reduced from 304 to 289: in 4 cases the survey was not deliverable, 4 cooperatives had dissolved, 6 were not actually energy cooperatives, 1 case had recently changed its legal form. With a response rate of 47%, the final data set comprises 136 responses (from 77 digital and 59 hardcopy questionnaires). However, not all 136 of the returned questionnaires were filled out completely. We checked for answers that seemed contradictory or incomprehensible. If an error could be clearly identified and the correct answer derived, the answer was adjusted, otherwise the answer was replaced by "missing data".

 Anonymization
Participating cooperatives have been assured that their information will be kept confidential and will only be made public anonymously. For this reason, the data have been anonymized in in order to prevent any identification of individual cooperatives.

 How to Use the Data
* The data are available in CSV and SPSS (sav.) format.
* A codebook and a modified version of the used questionnaire are provided to illustrate the data and variable structure. In the questionnaire, the variable names are assigned to the corresponding questions. In the codebook, further information on these variables (valid n, answer categories) can be found. This information (of the codebook) is already integrated in the SPSS file.

 Current Embargo on Data
These data are currently under embargo and will only be released when the project is completed (not before 2020).

#Additional Information
* The used questionnaire is provided in German and French.
* Descriptive results of the survey were published in a WSL report: https://www.dora.lib4ri.ch/wsl/islandora/object/wsl:18943

community-energy

display_name: community-energy

cooperatives

display_name: cooperatives

energy-cooperatives

display_name: energy-cooperatives

renewable-energy

display_name: renewable-energy

switzerland

display_name: switzerland

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Energy Cooperatives in Switzerland: Survey Results // Energiegenossenschaften in der Schweiz: Befragungsergebnisse


en: remote-sensing switzerland force sentinel-2 raster-processing

media_type: image/tiff

en: An example of the index EVI for one of the generated 30 by 30 km tiles located around the city of Zürich. The values are multiplied by 10.000. The date of the image is 24.07.2018.

format: TIFF

en: Parameter file that defined all the parameters for processing the Sentinel-2 Level 2 imagery

en:
We processed Sentinel-2 images from 2017 to 2023 for Switzerland with the Software FORCE (Frantz 2019). The respective parameter files can be found here: [Github](https://github.com/TLKoch/Sentinel-2_CH). All the images consist of several TB and therefore, access will be granted upon request.
The available bands (in spatial reference system EPSG 3035) are the following:
*Red, Green, Blue, NIR, Red-Edge-1, Red-Edge-2, Red-Edge-3, SWIR-1, SWIR-2*
The available indices (in spatial reference system EPSG 3035) are the following:
*CCI, CIRE, NDWI/NDMI, NDVI, EVI*
Further indices might be provided upon request.

 Processing
After downloading Level 1 data for the 14 Sentinel-2 tiles covering Switzerland (T31TGN, T32TLT, T32TMT, T32UMU, T32TNT, T32TPT, T31TGM, T32TLS, T32TMS, T32TNS, T32TPS, T32TLR, T32TMR, T32TNR) with an estimated cloud cover of less than 80 \%, we processed the data further with FORCE v. 3.7.8-12.
FORCE was used for radiometric correction, including atmospheric and topographic corrections using the digital elevation model from Copernicus Land Monitoring Service (EU-DEM v. 1.1), with a 25 m spatial resolution, a bidirectional reflectance distribution function (BRDF) correction, and an adjacency effect correction. For cloud masking, the improved Fmask algorithm with buffers of 300 m for clouds, 90 m for shadows, and 30 m for snow were used (Frantz et al. 2018; Zhu et al. 2015). All bands were resampled using cubic convolution to 10 m spatial resolution. Shadows, low and poor illumination as well as saturation were masked out. The co-registration of all images was made with monthly composites of near-infrared Landsat Collection 2 images from 2014 to 2021 (Rengarajan et al. 2020;Rufin et al. 2021). With this the geometric consistency improved. The processed images are available in tiles of 30 by 30 km.

 Example images
Uploaded is an example of the index EVI for one of the generated 30 by 30 km tiles located around the city of Zürich. The values are multiplied by 10.000. The date of the image is 24.07.2018.

force

display_name: force

raster-processing

display_name: raster-processing

remote-sensing

display_name: remote-sensing

en: Sentinel-2 imagery of Switzerland


en: atlantic-region metabarcoding fish-composition actinopterygii teleo chondrichthyes bayofbiscay edna

en: Data access

en:
Environmental DNA complements scientific trawling in surveys of marine fish biodiversity (Dataset 2019)
In October 2019 we chose 15 sites from the 2019 EVHOE survey for eDNA sampling. The French international EVHOE bottom trawl survey is carried out annually during autumn in the BoB to monitor demersal fish resources. At each site, we sampled seawater using Niskin bottles deployed with a circular rosette. There were nine bottles on the rosette, each of them able to hold ∼5 l of water. At each site, we first cleaned the circular rosette and bottles with freshwater, then lowered the rosette (with bottles open) to 5 m above the sea bottom, and finally closed the bottles remotely from the boat. The 45 l of sampled water was transferred to four disposable and sterilized plastic bags of 11.25 l each to perform the filtration on-board in a laboratory dedicated to the processing of eDNA samples. To speed up the filtration process, we used two identical filtration devices, each composed of an Athena® peristaltic pump (Proactive Environmental Products LLC, Bradenton, Florida, USA; nominal flow of 1.0 l min–1 ), a VigiDNA 0.20 μm filtration capsule (SPYGEN, le Bourget du Lac, France), and disposable sterile tubing. Each filtration device filtered the water contained in two plastic bags (22.5 l), which represent two replicates per sampling site. We followed a rigorous protocol to avoid contamination during fieldwork, using disposable gloves and single-use filtration equipment and plastic bags to process each water sample. At the end of each filtration, we emptied the water inside the capsule that we replaced by 80 ml of CL1 conservation buffer and stored the samples at room temperature following the specifications of the manufacturer (SPYGEN, Le Bourget du Lac, France). We processed the eDNA capsules at SPYGEN, following the protocol proposed by Polanco-Fernández et al., (2020). We performed library preparation and sequencing at Fasteris (Geneva, Switzerland). Specifically, we prepared four libraries using the MetaFast protocol (a ligation-based method) and sequenced them separately. We carried out paired-end sequencing using a MiSeq sequencer (2 × 125 bp, Illumina, San Diego, CA, USA) on two MiSeq Flow Cell Kits (v3; Illumina), following the manufacturer’s instructions. We analysed the sequence reads using the OBITools package (http://metabarcoding.org/obitools; Boyer et al., 2016), following the protocol described by Valentini et al. (2016).
Data content:
	* rawdata/: contains the raw reads for each individual sample. One archive contains the paired-end reads specified by the _R1 or _R2 suffix as well as individually tagged PCR replicates (if available) together with an archive containing all extraction and PCR blank samples of the library. Reads have been demultiplexed using cutadapt but not trimmed, individual demultiplexing tags and primers remain present in the sequences.
	* taxadata/: contains the table with all detected taxonomy for each sample after bioinformatic processing (see Polanco et al. 2020 for details; https://doi.org/10.1002/edn3.140) and associated field metadata.
	* metadata/: contains two metadata files, one related to the data collected in the field for each filter, and the second related to the sequencing process in the lab (including the tag sequence, library name, and marker information for each sample)

actinopterygii

display_name: actinopterygii

atlantic-region

display_name: atlantic-region

bayofbiscay

display_name: bayofbiscay

chondrichthyes

display_name: chondrichthyes

edna

display_name: edna

fish-composition

display_name: fish-composition

metabarcoding

display_name: metabarcoding

teleo

display_name: teleo

educ

en: Education, culture and sport

en: Environmental DNA Marine France Evhoe 2019


radar-wind-profiler-davos-wolfgang

maintainer: Maxim Hervo

title_for_slug: radar-wind-profiler-davos-wolfgang

en: radar wolfgangpass wind-direction raclets wind-speed

en: Radar Wind Profiler Data

en: A Vaisala Lap3000 was installed at Davos Wolfgang to record wind profiles. The time format is number of days fom January 0, 0000 in UTC with a 10 minute resolution.

en: The RADAR wind profiler from Meteoswiss was installed at Davos Wolfgang (LON: 9.853594, LAT: 46.835577) and measured from 2171 m above sea level to 11079 m, with a temporal resolution of 10 minutes.

raclets

display_name: raclets

radar

display_name: radar

wind-direction

display_name: wind-direction

wind-speed

display_name: wind-speed

wolfgangpass

display_name: wolfgangpass

en: RADAR Wind profiler Davos Wolfgang


maintainer: EnviDat Support

en: life-history-traits natural-enemies urban-ecology hymennoptera wasps urbanization richness bees hymenoptera cities performance-traits cavity-nesting

en: Information on the study sites

en: For each site, the IDs, city, coordinates, structure where the trapnest was attached and height is provided

en: Performance traits and life-history traits

en:
It contains the data of two performance traits (survival and parasitism) and two life-history traits (sex ratio and number of offspring per nest for the hosts) at the nest level.

We assessed performance traits, i.e. survival and parasitism, at the individual cell level. Specifically, for each cell within a nest, we noted whether the cell was alive or dead (survival), and whether it had a parasite or not (parasitism). Further, we calculated the parasitism rate as the number of cells with a parasite divided by the total number of cells. Concerning life-history traits, we calculated the total number of brood cells per nest as the total number of brood cells within a single nest, regardless of whether the larvae were dead, alive or parasitized. Finally, we used the probability that a femalehost emerged from a given cell as a proxy for the sex ratio. To do so, we first identified the sex of the individual hosts. Then, we noted it in a binary way to indicate whether the host was a female or not. We could identify the sex of all hatched hosts. Further, because CNBW first lay females and then males, on some occasions we could also identify the host sex in dead and parasitized cells, that is, when we had already identified the sex of the preceding and the following cells.

en: Taxonomic metrics on CNBW

en:
The data contains at the site level the species richness of cavity-nesting bees and wasps. It also contains site level estimates of the life-history traits and the performance traits.

We calculated species richness, abundance, and number of nests of the hatched hosts separately for bees and wasps. We calculated the abundance of hatched hosts as the number of brood cells where an individual emerged, i.e. the total number of brood cells minus the number of parasitized cells and the number of cells with no emergence for reasons other than parasitism.

City codes: An =Antwerp, Pa = Paris; Po = Poznan; Ta =Tartu; Zu= Zurich

en: Predictors of the study

en: Taxonomic metrics on the natural enemies

en: It contains the species richness and the abundance of natural enemies per site.

en:
 Background
Urban ecosystems are associated with socio-ecological conditions that can filter and promote taxa. However, the strength of the effect of ecological filtering on biodiversity could vary among biotic and abiotic factors. Here, we provide the data used to investigate the effects of habitat amount, temperature, and host-enemy biotic interactions in shaping communities of cavity-nesting bees and wasps (CNBW) and their natural enemies. To do so, we installed trap-nests in 80 sites distributed along urban intensity gradients in 5 European cities (Antwerp, Paris, Poznan, Tartu and Zurich). We quantified the species richness and abundance of CNBW hosts and their natural enemies, as well as two performance traits (survival and parasitism) and two life-history traits (sex ratio and number of offspring per nest for the hosts).
The dataset contains:
* The taxonomic metrics on CNBW
* The taxonomic metrics on the natural enemies from CNBW
* The life-history traits and performance traits

bees

display_name: bees

cavity-nesting

display_name: cavity-nesting

cities

display_name: cities

hymennoptera

display_name: hymennoptera

hymenoptera

display_name: hymenoptera

life-history-traits

display_name: life-history-traits

natural-enemies

display_name: natural-enemies

performance-traits

display_name: performance-traits

richness

display_name: richness

urban-ecology

display_name: urban-ecology

urbanization

display_name: urbanization

wasps

display_name: wasps

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Community structure, life-history traits and performance traits of urban cavity-nesting bees annd wasps


en: frost-change-velocity sdms ground-temperature precipitation aridity soil

en: Mean annual temperature modified from CHELSA

en: Mean diurnal range modified from CHELSA

en: Soil clay content modified from SoilGrids

en: Precipitation of driest quarter modified from CHELSA

en: Precipitation seasonality from CHELSA

en: Soil pH modified from SoilGrids

en: Frost change frequency modified from CHELSA

en: Soil organic carbon content modified from SoilGrids

en: The dataset contains seven environmental layers (average annual temperature, aridity [annual precipitation divided by annual potential evapotranspiration], frost change frequency, precipitation in the driest quarter, mean diurnal temperature range, and precipitation seasonality) modified from CHELSA (https://chelsa-climate.org/) and three soil layers (soil organic matter content, pH water, and clay content) modified from SoilGrids (https://soilgrids.org/).

aridity

display_name: aridity

frost-change-velocity

display_name: frost-change-velocity

ground-temperature

display_name: ground-temperature

precipitation

display_name: precipitation

sdms

display_name: sdms

soil

display_name: soil

educ

en: Education, culture and sport

en: Environmental layers for SDM simulations (GDPlants)


maintainer: Giulia Francesca Azzurra Donati

en: ecological-corridors integrated-modelling circuit-theory human-dominated-landscapes biodiversity urban-spatial-planning

en: Amphibian breeding sites of national importance - cantons of Aargau and Zürich

en: Amphibian breeding sites of national importance (focal nodes) in the cantons of Aargau and Zürich, 30x30 m resolution, binarised ascii format.

en: Binarized "green" and "grey" landcover data (Cantons of Aargau and Zürich)

en: "Green" landcover refers to lawns and vegetated urban surfaces such as, for example private gardens, public parks, cemeteries, green stripes along roadsides, etc. While "grey" landcover refers to impervious grounds such as roads, troittoirs, other impervious. Binarized maps, 30x30m resolution.

en: Amphibian whole life cycle predictors - 10m resolution

en:
Amphibian whole life cycle predictors include 6 variable types:
(1)	Topographic – slope [°]: derived from the Swiss Topographical Landscape model (swissTLM 3D 2015) at 2 m resolution (elevation uncertainty ± 0.5m) and, subsequently, aggregated to a median value;
(2)	Hydrologic: two predictors including nearest distance to water [m] (all water-related objects and rasterized lotic, lentic and reedbeds from the regional cadastral maps – AV: Daten der Amtliche Vermessung) and runoff coefficient [C] (between 0 and 1 relating amount of runoff to amount of precipitation, mapped AV: Daten der Amtliche Vermessung data against literature values for different land covers);
(3)	Edaphic – soil moisture variability (not available): can gathered from the spatial modelling of Ecological Indicator Values in Switzerland (Descombes et al., 2020) and resampled from 100m to 10m;
(4)	Vegetation: we calculated the median and standard deviation of the Normalized Difference Vegetation Index (NDVI) from all available cloud free Sentinel-2 pixels available between April and October for the years 2016 to 2019 (Drusch et al., 2012) and the median vegetation height [m] (not available) can gathered from Ginzler and Hobi (2015);
(5)	Land-use derived: includes three predictors, grassland density [grassland/cell] (not available) - can be gathered from Pazur et al. (2021), total grasslands area evaluated using a spatial weight matrix and a 250m neighborhood radius around each cell; urbanization [buildings/cell] – average building density for a 250m neighborhood around each cell based on the AV: Daten der Amtliche Vermessung ; and traffic intensity [vehicles/day] – average daily vehicle count (Nationales Personenverkehrsmodells);
(6)	Movement-ecology related: includes three predictors of proximity – nearest forest distance [m]; nearest rock-gravel and sandy area (RGS) distance [m] and nearest road distance [m] (considering any road type) – all calculated based on the AV: Daten der Amtliche Vermessung maps.

en: Amphibian species specific landscape resistance maps.

en: For each amphibian species we used the weighted average Ensemble model suitability map and converted it to a resistance map using an exponential decay function following (Duflot et al., 2018) using the species-specific mpa threshold previously computed (Preau et al., 2020). The function assigns a resistance value of 1,000 when habitat suitability equals zero, and a value of one when habitat suitability is greater than or equal to the binarization threshold. The exponential shape strengthens the barrier effect of less favorable areas.

en: Amphibian monitoring data

en: Processed amphibian occurrence data (2017-2019) in the cantons of Aargau and Zürich. The dataset includes information for the following species: _Alytes obstetricans_,_Bombina variegata_, _Bufo bufo_, _Hyla arborea_, _Ichtyosaura alpestris_, _Lissotriton helveticus_, _Lissotriton vulgaris_, _Rana temporaria_, _Salamandra salamandra_, and _Triturus cristatus_.

en: The data includes (1) amphibian occurrence data (2017-2019) for ten species across the cantons of Aargau and Zürich gathered from the Coordination Center for the Protection of Amphibians and Reptiles of Switzerland (http://www.karch.ch), (2) amphibian whole-life cycle environmental predictors (i.e. topographic, hydrologic, edaphic, vegetation, land-use derived, movement-ecology related), and (3) local urban "green" and "grey" landcover data which can be used to identify opportunities for Blue-Green Infrastructure (through green or grey transitions) in support of regional landscape connectivity.

biodiversity

display_name: biodiversity

circuit-theory

display_name: circuit-theory

ecological-corridors

display_name: ecological-corridors

human-dominated-landscapes

display_name: human-dominated-landscapes

integrated-modelling

display_name: integrated-modelling

urban-spatial-planning

display_name: urban-spatial-planning

en: Amphibian and urban-rural landscape data Swiss Lowlands


en: wetlands occupancy-models conservation connectivity landscape amphibians

en: Structural connectivity data

en: This file contains structural connectivity data (three different metrics), calculated based on all existing ponds in each year, in long format. See Readme v2.0 for details. Required to run Model code 2.

en: Covariate data 1

en: This file contains covariate data that does not change over time for 856 ponds: the region the pond is in, whether the pond is old or new (constructed since 1991), elevation, water surface area, fluctuations of the water table (yes, no), the percent forest cover in 100m radius around the pond, the area or large (>6m wide) roads in 1km radius around the pond.

en: Covariate data 2

en: This file contains covariate data that changes over time for 856 ponds in 21 years (long format): whether or not a pond exists in year _t_, the age of constructed ponds in year _t_, structural connectivity of the pond in year _t_.

en: Original raw data

en: This file contains the original raw monitoring data as provided by the canton of Aargau. Access is restricted and only considered upon request and in consultation with the canton of Aargau.

en: Model code

en: This R markdown file contains all code and descriptions necessary to load and format the provided data and to fit the dynamic occupancy models described in the associated publication, including JAGS code for the fitted models.

en: Readme

en: Description of methods and datasets. Version 1.

en: Model code 2

en: This R markdown file contains all code and descriptions necessary to load and format the provided data and to fit the dynamic occupancy models described in the second associated publication, including JAGS code for the fitted models.

en: Model code, description

en: This is the output of the R markdown file that provides JAGS model code and describes how to format the provided data and fit the dynamic occupancy models described in the associated publication, for a quick overview.

en: Potential population connectivity data

en: This file contains potential population connectivity data (three different metrics), calculated based on all existing and occupied ponds in each year, for each species, in long format. See Readme v2.0 for details. Required to run Model code 2.

en: Observation data

en: This file contains detection/non-detection data for the 12 amphibian species between 1999 and 2019 for 3 annual visits. Detectable denotes whether or not a visit j was made to pond i in year t. ObservedID gives a unique ID for the observer collecting the data during visit j to pond i in year t.

en: Model code 2, description

en: This is the output of the R markdown file Model code 2 that provides JAGS model code and describes how to format the provided data and fit the dynamic occupancy models described in the second associated publication, for a quick overview.

en: Readme, v 2.0

en: Description of methods and datasets. Version 2.0, including new datasets fro structural and potential population connectivity.

en:
In the canton of Aargau, hundreds of new ponds have been constructed since the 1990s to benefit declining amphibian populations. This dataset consists of monitoring data for all 12 pond-breeding amphibian species in the canton of Aargau from 1999 to 2019 in 856 ponds, and environmental variables that describe the ponds and the landscape surrounding the ponds. Species observation data is detection/non-detection data from repeat visits during survey years, during which all potentially suitable ponds in an area were surveyed. Environmental variables describing the ponds are whether the pond has been newly constructed since 1991 or not, pond age (if constructed), elevation a.s.l., the water surface area, and whether the water table fluctuates or not. Environmental variables describing the surroundings of the ponds are the percent area of forest within a circular buffer of radius 100m around the pond, the area of large (width ≥6m) roads within a circular buffer of radius 1km around the pond, as well as structural and potential population connectivity, quantified by three different metrics each.
The canton of Aargau is the owner of the monitoring data; the original datafile is only disclosed upon request and in consultation with the canton of Aargau.
The edited dataset contains cleaned observation data for the 12 amphibian species, as well as compiled and edited covariate data and code to fit dynamic occupancy models.

amphibians

display_name: amphibians

connectivity

display_name: connectivity

conservation

display_name: conservation

landscape

display_name: landscape

occupancy-models

display_name: occupancy-models

wetlands

display_name: wetlands

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Amphibian observation and pond data (Aargau, Switzerland)