maintainer: Mathias Bavay

en: air-pressure stillberg dew-point-temperature relative-humidity soil-temperature precipitation-sum treeline wind-direction shortwave-radiation air-temperature wind-speed snow-depth

en: The Davos Stillberg meteorological data (Stillberg_meteo_v1.1.zip) consists of timeseries from five meteorological stations operated at the Stillberg treeline ecological research site. Metadata are provided in the folder 'Stillberg_meteo_metadata' and the data in the folder 'Stillberg_meteo_data' with subfolders for the three quality levels 'raw_standardized', ‘raw_edited’, and ‘filtered’.

en: The Davos Stillberg meteorological data (Stillberg_meteo_v1.zip) consists of timeseries from five meteorological stations operated at the Stillberg treeline ecological research site. Metadata are provided in the folder 'Stillberg_meteo_metadata' and the data in the folder 'Stillberg_meteo_data' with subfolders for the three quality levels 'raw_standardized', ‘raw_edited’, and ‘filtered’.

en: The Davos Stillberg meteorological data (Stillberg_meteo_v2.0.zip) consists of timeseries from five meteorological stations operated at the Stillberg treeline ecological resea...

en:
 Background information
The Stillberg ecological treeline research site is located in the transition zone between the relatively humid climate of the Northern Alps and the continental climate of the Central Alps. In 1975, 92,000 seedlings of the high-elevation conifer species *Larix decidua* Mill. (European larch), *Pinus cembra* L. (Cembran pine), and *Pinus mugo* ssp. *uncinata* (DC.) Domin (mountain pine) were systematically planted across an area of 5 hectares along an elevation gradient of about 150 metres, with the aim to develop ecologically, technically, and economically sustainable afforestation techniques at the treeline to reduce the risk of snow avalanches. In the course of time, additional research aspects gained importance, such as the ecology of the treeline ecotone under global change. Alongside the ecological long-term monitoring of the afforestation, several meteorological stations have recorded local meteorological conditions at the Stillberg research site. Here, we provide the Davos Stillberg meteorological timeseries of five stations from 1975 (01-01-1975), the year of the afforestation establishment, until the end of the year 2022 (31-12-2022).

 Station description
The five meteorological stations were all installed at the same location (46°46′25.015″N 9°52′01.792″E) at 2090 m a.s.l., in the lower part of the afforestation area. In general, the five stations were operated sequentially (Stillberg_meteo_metadata_stations_v1.csv). However, there are some overlapping time periods when more than one station was operated in parallel. The stations have recorded environmental parameters, such as air and soil temperature, dew point temperature, air pressure, relative humidity, wind direction and velocity, radiation, precipitation, and snow depth (Stillberg_meteo_metadata_parameters_v1.csv). The meteorological measurements were recorded hourly from 1975 until 1996 and have been recorded in 10-minute intervals since 1997.

 Data description
We processed the Davos Stillberg meteorological timeseries with the MeteoIO meteorological data pre-processing library (Bavay & Egger, 2014). Data files are provided for each station and quality level separately and named according to the station (see ‘Stillberg_meteo_metadata_stations_v1.csv’). From the raw data in their original formats, we generated three data quality levels: raw standardized (folder ‘raw_standardized’), edited (folder ‘raw_edited’) and filtered (folder ‘filtered’). The processing level is indicated in the headers of the data files. The whole processing protocol is described in a set of human-readable configuration files that are used by MeteoIO to generate the required data quality levels. This improves long-term reproducibility (Bavay et al., 2022), as the data could be regenerated in the future, even using a completely different software, to account for additional data points or to introduce new data corrections. The first quality level (raw standardized) is generated by parsing the original data files and interpreting them in order to convert all data points to a common format and meteorological parameter naming scheme, while excluding unreadable or duplicated data lines. The generated data files are derivatives of CSV files, with a standardised header that contains the metadata that are necessary to interpret and use the data (use metadata) and to populate a data index (search metadata). The latter is a textual implementation of the Attribute Convention for Data Discovery (ACDD) metadata standard (Attribute Convention for Data Discovery 1-3, 2022). The second quality level (edited) builds on the raw data by performing low-level data editing, such as removing some data periods that are known to be unusable (often based on maintenance records or anecdotal evidence) or applying undocumented calibration factors (for example, when there seems to be an obvious offset on a measured parameter for a period between two documented maintenance operations). The third quality level is generated by applying statistical filters on the data (per station and per meteorological parameter) to exclude presumably wrong values. We did not perform gap filling, as no single strategy could be relied upon that would work best for all possible data usage scenarios.

air-pressure

display_name: air-pressure

air-temperature

display_name: air-temperature

dew-point-temperature

display_name: dew-point-temperature

precipitation-sum

display_name: precipitation-sum

relative-humidity

display_name: relative-humidity

shortwave-radiation

display_name: shortwave-radiation

soil-temperature

display_name: soil-temperature

stillberg

display_name: stillberg

treeline

display_name: treeline

wind-direction

display_name: wind-direction

wind-speed

display_name: wind-speed

en: Long-term meteorological station Stillberg, Davos, Switzerland at 2090 m a.s.l.


photogrammetric-drone-data-schurlialp

maintainer: Yves Bühler

title_for_slug: photogrammetric-drone-data-schurlialp

en: photogrammetry drone-data uav orthophoto wingtra dsm

state: active

type: dataset

en: Data Access

en:
- 10 cm DSM
- 10 cm HS
- 3 cm orthophoto
- original RGB images
- Agisoft Metashape Processing Report

All of the products are also available as a cloud optimized geotiff.

format: SERVICE

en: The data was collected on 16.04.2021 and on 28.05.2021 with a Wingtra Gen II and a Sony RX1 II RGB sensor to obtain snow depth and distribution data. Following the data collection, the data was processed with Agisoft Metashape. A 10cm DSM, a 10cm snow depth raster, a 3mm orthophoto and the original drone images are available for download.

drone-data

display_name: drone-data

dsm

display_name: dsm

orthophoto

display_name: orthophoto

photogrammetry

display_name: photogrammetry

uav

display_name: uav

wingtra

display_name: wingtra

educ

fr: Éducation, culture et sport

de: Bildung, Kultur und Sport

en: Education, culture and sport

it: Istruzione, cultura e sport

envidat

fr: EnviDat: le portail de données environnementales

de: EnviDat: das Umwelt-Datenportal

en: EnviDat: the Environmental Data Portal

it: EnviDat: il portale dei dati ambientali

fr: EnviDat est le portail de données du WSL; il offre un accès uniformisé et réglementé aux données de surveillance et de recherche en matière d’environnement. Ce portail est capable d’héberger et de publier des ensembles de données précieuses et uniques, qui sont partagées aux quatre coins de la planète. Ce faisant, EnviDat favorise la recherche et contribue à l’avancement des sciences environnementales.

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

de: EnviDat ist das Datenportal der WSL für einen einheitlichen und verwalteten Zugang zu Umweltdaten aus Monitoring- und Forschungsprojekten. Auf dem Portal können Datensätze gehostet und veröffentlicht werden. Durch die weltweite Bereitstellung einzigartiger und wertvoller Datensätze leistet EnviDat einen Beitrag zur Forschung im Bereich der Umweltwissenschaften.

it: EnviDat è il portale dati del WSL che fornisce un accesso unificato e gestito ai dati di monitoraggio ambientale e di ricerca. Il portale ha la capacità di ospitare e pubblicare serie di dati preziosi e unici che vengono condivisi in tutto il mondo. Così facendo, EnviDat promuove la ricerca e contribuisce al progresso della scienza ambientale.

political_level: other

wsl

capacity: public

type: organization

approval_status: approved

key: guid

key: uri

value: Envidat Harvester

en: Photogrammetric Drone Data Schürlialp


maintainer: EnviDat Support

en: land-use-change urbanization modeling land-use statistical-model landscape-services switzerland

en: Scripts for Assessing potential landscape service trade-offs driven by urbanization in Switzerland

media_type: application/zip

en:
Scripts ordered by their main purpose within sequential folders in this ReadMe marked with

Within the folders the capital letters refer to the parallel or sequential use of the scripts; scripts here in ReadMe are marked with

 00_Function Scripts
 Functions.r
Script containing several functions for analyzing statistical models: cohen.kappa, meva.table, D2, max-Tss, plot-TSS

 Service_functions.R
Script containing functions for calculating all services and returning sums (and median for bd and rec) as well as rasters

 01_Data Preparation
 A_AS_raster_preparation.R
Preparation of the land use rasters for the years 1985, 1997, and 2009 based on the original Arealstatistik (AS/ASCH); Assigning our categories and assining new values to all "construction sites" for calibrating the models
For model projection starting point (2009) and for service calculations (all ASCH years) the "other" categories were assigned to the land use categories based on dominant neighbor, so that there were no empty cells
Creation of water & mountainous area raster that stayed stable throughout the projections
Creation of MFH raster (2009), to have as base for all new projection years, as this category never becames any other

 B_Factors_preparation.R
Preparation of the factor rasters that were used to calculate service values per cell (see Table 2): LWfactor, Transportation, Vol, Rivers, Lakes, slope, TWW, Hazard_risk

 B_Predictors_preparation.R
Preparation of the raster of the predictors used for calibrating (ASCH years) and projecting (stable) the transition models that do not depend on the land use categories: Temperature (ASCH years), solar radiation (stable), Public transportation access (stable), Elevation (stable), Workers density (ASCH years), Population change (ASCH transitions)

 B_Regions_preparation.R
Preparation of bioregions as raster to be used to mask asxxxx later to calculated services and land use area just for one region

 C_Pred_proj.R
Projecting the dynamic predictors into the future for projecting the land use transitions with the model: Linear extrapolations for workers densities and population; more detailed extrapolation of temperature (based on data for all stations that matched between the temp table we used for the calibration period and the projections from CS2M, and then making a spatial interpolation for all years based on the interpolation of temperature for all years per station)

 02_Model calibration
 A_Bioreg_pred_corr.R
Calculating correlation between the predictors for each bioregion and land use category, Output are those with too high correlation so that one predictor can be removed from transitions were both predictors occur

 A_trans_numbers_bioreg.R
Calculate transition numbers for each bioregion to decide which transitions to primarily consider

 B_Bioreg_ext_eval.R
Calculating TSS based on the external evaluation for the bioregion transitions that happened often enough to try to model them (calibration data: 85-97, evaluation data: 97-09)

 B_Bioreg_int_eval.R
Calculating TSS based on the internal evaluation for the bioregion transitions that happened often enough to try to model them (calibration data: 70%, evaluation data: 30%)

 C_Bioreg_TSS_analysis.R
Extracting TSS numbers from internal and external evaluation, calculating mean and median for each transition for each region for each evaluation method and saving as csv per region to be able to select only the transitions with high enough model performance

 D_Bioreg_Models_for_prediction.R
Calibration of the models that were then used to project land use transitions into the future; calibrated separately for each bioregion

 E_Residuals_trans_models.R
Calculation of Moran's I statistics to analyze the residuals of the land use transition models

 03_Projections
 A_Bioreg_Projections_run.R
Master script for: Extrapolaitng into the future with the regional models and then assembling for each time step to calculate new AS predictors; Several Outputs: txt file to test for NAs in Predictors, txt file with random seed number for sampling, txt file with times for calculation steps (check progress of script while running), csv sheet with projected transition frequencies, tif-rasters for every region and time step, pdf with raster plot for every region and time step

 04_Service calculation
 A_Bioreg_as_services.R
Calculate services per bioregion for years 1985, 1997, 2009

 A_Service_calculation_bioregions.R
Extracting service numbers(sums) per bioregions for all projection runs and storing them in a list of matrixes to be available for further plotting; can be run for swiss wide projections or regional ones

 05_Analysis
 A_Bioreg_ASCH_development.R
Extracting the occurrence of each category per region for all runs (first part), then for ASCH years, and then plotting them nicely; only works for regional projections

 A_Bioreg_Predictors_importanceD2.R
Calculating D2 for each transition and each considered predictor from bivariate models to get value of importance

 B_Bioreg_Pred_imp_analysis.R
Using calculated D2 to sort Predictors according to their importance for each transition

 A_Bioreg_Spatial_results_analysis.R
Plotting randomly sampled runs for ASCH and services to analyses their spatial development

 A_Bioreg_Transition_numbers_check_v1.R
Analyzing the frequency for all transitions for all regions and producing the point plots for each transition separately

 A_Bioreg_Transition_numbers_check_v2.R
Analyzing percentage and numbers of all transitions but plotting them per region and originating ASCH category

 B_Transition_Analysis.R
Further Analysis of transition numbers

 A_Service_analysis.R
Plotting of the service development for bioregions in several ways for analyzing

format: ZIP

mimetype: application/zip

en: Data for Assessing potential landscape service trade-offs driven by urbanization in Switzerland

en:
The provided folder structure follows the set up of the scripts.
Data is only provided when it has been fully produced by us, otherwise dummies are given.
For data that will be produced by one of the scripts, no dummies are given.
The folders may contain sub-folders, which would be filled if the scripts were all run

 00_Analysis_Data
Data produced throughout the process of the calibration and projection that is later needed for analysis

 01_Raw_Data
Primary data from external sources that were used to compile the rasters and numbers used during the calibration and projection of landscape transitions as well as service calculation

 02_Prepared_Data
Data that will be prepared for further use by scripts are put in here
Additionally it contains the parameter sheets for the transition predictors that we compiled

 03_Model_Data
 Model outputs
Folder were the projection models statistics will be saved
 Models
Folder into which the actual transition models will be saved
 Residuals
Folder into which data on models residuals will be saved for future use

 04_Projected_Data
The output of the projections will be saved into this folder

 05_Service_Data
Any service calculations will be saved in here

 06_Results_Analysis
Any Analysis plots and tables as well as intermediate data will be saved here in the respective sub-folder

en:
Data and scripts of publication:

Madleina Gerecke, Oskar Hagen, Janine Bolliger, Anna M. Hersperger, Felix Kienast, Bronwyn Price, Loïc Pellissier (2019) Assessing potential landscape service trade-offs driven by urbanization in Switzerland. Palgrave communications.

Contains land use projections for Switzerland and scripts and data for these projections as well as the calculation of landscape services.

Data Folder:
Contains sub-folder with the data necessary for this study (provided were no copyright issues, otherwise placeholders with descriptions), and folders where produced data may be stored

Scripts Folder:
Contains scripts organized into subfolders depending on their purpose

Note: Some abbreviations within the scripts and data are derived from German words and not English.

land-use

display_name: land-use

land-use-change

display_name: land-use-change

landscape-services

display_name: landscape-services

modeling

display_name: modeling

statistical-model

display_name: statistical-model

switzerland

display_name: switzerland

urbanization

display_name: urbanization

en: Land use projections and services for Switzerland


maintainer: Michael Nobis

en: automatic-detection artificial-intelligence plants computer-vision biological-invasions invasive-species

en: Detected occurrences of Senecio inaequidens along highways on the Swiss Plateau. The number of image tiles in which the species was recognized is shown (Fig. 25 in the report). Image coordinates of the middle and side strips can be displayed separately in the interactive map.

en: Detected occurrences of Ailanthus altissima along highways on the Swiss Plateau. The number of image tiles in which the species was recognized is shown (Fig. 23 in the report). Image coordinates of the middle and side strips can be displayed separately in the interactive map.

en: Detected occurrences of Senecio inaequidens along highways on the Swiss Plateau. To reduce false-positives, only images in which the species was recognized in at least three of 16 image tiles are considered as occurrences (Fig. 40 in the report). Image coordinates of the middle and side strips can be displayed separately in the interactive map.

en: Detected occurrences of Ailanthus altissima along highways on the Swiss Plateau. To reduce false-positives, only images in which the species was recognized in at least three of 16 image tiles are considered as occurrences (Fig. 38 in the report). Image coordinates of the middle and side strips can be displayed separately in the interactive map.

en:
Transport infrastructure such as **highways** are important corridors for the spread of invasive species. In this project, an automated detection and mapping of **two invasive alien plant species** was developed and applied along highways in the **Swiss Central Plateau**, based on **artificial intelligence (AI, Deep Learning)**. The two target species are **tree of heaven *(Ailanthus altissima)*** and **narrow-leaved ragwort *(Senecio inaequidens)***.
The data is part of the project report and shows the mapping results in **interactive maps**. Technically speaking, these are **self-contained HTML files** that can be displayed with standard web browsers. To reduce the file size, the downloads are provided in zip format.
**Report**: [https://www.mobilityplatform.ch/de/research-data-shop/product/1690](https://www.mobilityplatform.ch/de/research-data-shop/product/1690)
**Project**: [https://www.wsl.ch/en/projects/automated-detection-of-invasive-alien-plants-along-highways/](https://www.wsl.ch/en/projects/automated-detection-of-invasive-alien-plants-along-highways/)

artificial-intelligence

display_name: artificial-intelligence

automatic-detection

display_name: automatic-detection

biological-invasions

display_name: biological-invasions

computer-vision

display_name: computer-vision

invasive-species

display_name: invasive-species

plants

display_name: plants

en: Automated detection of invasive alien plants along highways


maintainer: Matthias Haeni

en: meteorology wind-speed meteo climate-change long-term swiss-forest-lab par relative-humidity precipitation temperature

en: Data plot of the forest station (OTB)

media_type: application/pdf

en: Data overview for air temperature, relative humidity, precipitation, PAR, wind speed.

format: PDF

mimetype: application/pdf

en: Site photo of the forest station (OTB)

en: Site photo of the forest station from above (viewing downwards the slope).

mimetype: image/jpeg

en: Data plot of the field station (OTF)

en: Forest station data (OTB)

media_type: text/csv

en: Data file.

format: CSV

mimetype: text/csv

en: Site photo of the field station (OTF)

en: Site photo of the field station from below (viewing upwards the slope).

en: Site aerial photo (Othmarsingen)

en: Site aerial photo from both Othmarsingen stations. Source: Google. 2016. Site aerial photo from both Othmarsingen stations. Retrieved November 11, 2016, from https://www.google.ch/maps

en: Field station data (OTF)

en: High quality meteorological data are needed for long-term forest ecosystem research, particularly in the light of global change. The long-term data series published here comprises almost 20 years of measurements for two meteorological stations in Othmarsingen in Switzerland where one station is located within a natural deciduous forest stand (OTB) with European beech (_Fagus sylvatica_; 120-140 yrs) and lime trees (_Tilia sp._; 120-140 yrs) as dominant tree species. A second station is situated in the very vicinity outside of the forest (field station, OTF). The meteorological time series are presented in hourly time resolution of air temperature, relative humidity, precipitation, photosynthetically active radiation (PAR) and wind speed. Othmarsingen is part of the Long-term Forest Ecosystem Research Programme (LWF) established and maintained by the Swiss Federal Research Institute WSL.

climate-change

display_name: climate-change

long-term

display_name: long-term

meteo

display_name: meteo

meteorology

display_name: meteorology

par

display_name: par

precipitation

display_name: precipitation

relative-humidity

display_name: relative-humidity

swiss-forest-lab

display_name: swiss-forest-lab

temperature

display_name: temperature

wind-speed

display_name: wind-speed

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: Othmarsingen, Switzerland: Long-term forest meteorological data from the Long-term Forest Ecosystem Research Programme (LWF), from 1996 onwards


en: drifting-snow snowmicropen antarctica mass-flux meteorological-data terrestrial-laser-scanning

en: README

media_type: text/plain

en: Describes the dataset in detail

format: TXT

mimetype: text/plain

en: Dataset

en: Links to the dataset

en:
This dataset contains the data acquired during the expedition to Princess Elisabeth Antarctica Station in December 2016 and January 2017. The dataset consits of meterorological data, drifting snow mass flux data, SnowMicroPen data and Terrestrial Laser Scanning data.

Please refer to the README for more information about the data.

This dataset is the basis of the following publication:

Sommer, C. G., Wever, N., Fierz, C., and Lehning, M.: Wind-packing of snow in Antarctica, The Cryosphere Discuss., https://doi.org/10.5194/tc-2018-36, in review, 2018.

antarctica

display_name: antarctica

drifting-snow

display_name: drifting-snow

mass-flux

display_name: mass-flux

meteorological-data

display_name: meteorological-data

snowmicropen

display_name: snowmicropen

terrestrial-laser-scanning

display_name: terrestrial-laser-scanning

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Expedition to Princess Elisabeth Antarctica Station, 2016/2017


en: environmental-dna marine curacao coral-reefs fish-composition fish teleo caribbean-region edna

en: Data access

en:
Fish taxonomic, functional and phylogenetic composition variations recovered from eDNA metabarcoding along the coast of Curacao

In February 2020, we collected a total of 20 water samples, from 10 stations, with two filtration replicates per station, in the two investigated coastal areas. Each station consisted of a transect of 2 km at an overall constant distance from the coast. We recorded the GPS coordinates at the start and end of the transect, which we used to map the transect positions. We conducted eDNA sampling by using a filtration device composed of an Athena® peristaltic pump (Proactive Environmental Products LLC, Bradenton, Florida, USA; nominal flow of 1.0 L/min), a VigiDNA® 0.20 μM cross-flow filtration capsule (SPYGEN, le Bourget du Lac, France) and disposable sterile tubing for each filtration capsule. We performed two filtration replicates in parallel on each side of a boat, at each station, for 30 min corresponding to a volume of ~30 L of water filtered by each capsule. At the end of each filtration, the water inside the capsules was emptied, and we filled the capsules with 80 ml of CL1 Conservation buffer (SPYGEN, le Bourget du Lac, France) and stored at room temperature. We followed a strict contamination control protocol in both field and laboratory stages (Valentini et al., 2016). Each water sample processing included the use of disposable gloves and single-use filtration equipment to avoid any risk of contamination. Libraries were prepared with ligation using the MetaFast protocol (Fasteris).

caribbean-region

display_name: caribbean-region

coral-reefs

display_name: coral-reefs

curacao

display_name: curacao

edna

display_name: edna

environmental-dna

display_name: environmental-dna

fish

display_name: fish

fish-composition

display_name: fish-composition

marine

display_name: marine

teleo

display_name: teleo

en: Environmental DNA Marine Curacao 2020


maintainer: Joan Casanelles Abella

en: osmia-bicornis trap-nest zurich osmia-cornuta plant-pollinator-interactions paris cavity-nesting-bees hylaeus-communis urban-ecology antwerp tartu dna-metabarcoding chelostoma-florisomne poznan

en: Explanation data variables

en: Larval food composition

en: Information on the study sites

en: For each site, IDs, city, coordinates, structure where trapnest was attahced and height of the trapnest is provided

en: Urbanization poses threats and opportunities for the biodiversity of wild bees. A main gap relates to the food preferences of wild bees in urban ecosystems, which usually harbour large numbers of plant species, particularly at the larval stage. This data sets describes the larval food of four wild bee species (i.e. Chelostoma florisomne, Hylaeus communis, Osmica bicornis and Osmia cornuta) and three genera (i.e. Chelostoma sp., Hylaeus sp, and Osmia sp.) common in urban areas in five different European cities (i.e. Antwerp, Paris, Poznan, Tartu and Zurich). This data results from a European-level study aimed at understanding the effects of urbanization on biodiversity across different cities and citiscapes, and a Swiss project aimed at understanding the effects of urban ecosystems in wild bee feeding behaviour. Wild bees were sampled using standardized trap-nests in 80 sites (32 in Zurich and 12 in each of the remaining cities), selected following a double gradient of available habitat at local and landscape scales. Larval pollen was obtained from the bee nests and identified using DNA metabarconding. The data provides the plant composition at the species or genus level of the different bee nests of the studied species in the studied sites of the five European cities. For Hylaeus communis, this is the first study in reporting larval food composition.

antwerp

display_name: antwerp

cavity-nesting-bees

display_name: cavity-nesting-bees

chelostoma-florisomne

display_name: chelostoma-florisomne

dna-metabarcoding

display_name: dna-metabarcoding

hylaeus-communis

display_name: hylaeus-communis

osmia-bicornis

display_name: osmia-bicornis

osmia-cornuta

display_name: osmia-cornuta

paris

display_name: paris

plant-pollinator-interactions

display_name: plant-pollinator-interactions

poznan

display_name: poznan

tartu

display_name: tartu

trap-nest

display_name: trap-nest

urban-ecology

display_name: urban-ecology

zurich

display_name: zurich

en: Larval food composition of four wild bee species in five European cities


en: fungi urban-ecology fungal-pathogen birds urban biodiversity insects urban-biodiversity

en: Data tables including individual bird data with biometry, prey species from faecal samples, and fungi species from swab samples.

format: XLS

en:
We captured birds in urban parks and peri-urban forests in the cities of Lugano and Zurich. The urban sites were located in an urban forest (Lugano) and in a cemetery (Zurich), and the bird assemblages were comparable with those of the surrounding forests.
We captured individual birds during sessions lasting multiple days using mist-nets, concentrating the activities within 3-4 hours after sunrise and before sunset. We extracted birds from nets using single-use nitrile gloves and gently wiped their body parts with a dry foam swab MW940 (Medical Wire & Equipment), which was then placed in a screw-capped tube (2 ml), which was previously filled with 1 ml ethanol puriss. (Sigma-Aldrich) under sterile conditions.Then, we marked each bird with an alphanumeric leg band, identified the species, determined the sex and age whenever possible, measured for relevant biometrics (e.g. wing chord), the amount of body fat and pectoral muscle (i.e. body condition), and weighed.
Afterwards, we placed each bird in a disposable paper bag within a cotton bag that ensured respiration and left it for few minutes in a safe and calm place to allow for defecation and the collection of faecal samples. The faecal sample was collected from insectivorous and omnivorous birds, and few granivorous birds that are known to occasionally eat invertebrates, such as the house sparrow Passer domesticus.
After releasing the bird, we stored the faecal sample in a screw-capped tube (2 ml), which was previously filled with 1 ml ethanol puriss. (Sigma-Aldrich) under sterile conditions. We wore single-use nitrile gloves and used sterile toothpicks to collect solid samples. The tubes were initially stored in the refrigerator during the field campaign and no later than seven days after collection at -20°C until prepared for DNA extraction.
DNA extraction and library preparation was performed at WSL Phytopathology facilites, Sequencing was performed at Lausanne Genomic Technologies Facility (University of Lausanne; [https://wp.unil.ch/gtf/](https://wp.unil.ch/gtf/)) on an AVITI benchtop sequencing system (Element Biosciences). Bioinformatics was performed at the Genetic Diversity Center (ETH Zurich) using a custom pipeline.

biodiversity

display_name: biodiversity

birds

display_name: birds

fungal-pathogen

display_name: fungal-pathogen

fungi

display_name: fungi

insects

display_name: insects

urban

display_name: urban

urban-biodiversity

display_name: urban-biodiversity

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: Urban bird capture data with prey species and fungal community


en: snow-stratigraphy wet-snow-avalanche avalanche snow-instability snow climate-projections climate-change dry-snow-avalanche

en: Projections of avalanche activity

en: contains one file per IMIS station that indicates the daily probability for the occurrence of dry- or wet-snow avalanches in the vicinity of the respective station for each day during the time period 1.12.1981-31.05.2099 (months December to May) and all climate model chains and RCP scenarios.

en: SNOWPACK settings

en: contains .ini and .sno file indicating the settings used to drive SNOWPACK with the climate scenarios

en: Climate scenarios .smet

en: contains one .smet file per combination of station, climate model chain and RCP scenario. Each .smet file contains the downscaled meteorological data (time span 1.9.1981-31.8.2099) that was used to drive the SNOWPACK simulations.

en:
This data set includes 21st century projections of dry- and wet-snow avalanche activity for seven sites in the Swiss Alps as well as the downscaled climate scenarios and SNOWPACK configuration files used to produce these projections. The methods used to produce these data are described in the research article:
Mayer, S., Hendrick, M., Michel, A., Richter, B., Schweizer, J., Wernli, H., and van Herwijnen, A.: Changes in snow avalanche activity in response to climate warming in the Swiss Alps, EGUsphere, 2024, 1-32, https://doi.org/10.5194/egusphere-2024-1026, 2024.
We used downscaled climate projections to drive the snow cover model SNOWPACK and evaluated future dry- and wet-snow avalanche occurrences in the vicinity of seven automatic weather stations from the IMIS network using machine learning models trained with observed records of avalanche activity. Projections are available for three different emission scenarios (Representative Concentration Pathways, RCP2.6, RCP4.5 and RCP8.5) and eight climate model chains from the CH2018 ensemble. The output of the model chain is given by a daily probability for dry- or wet-snow avalanche occurrences. These probabilities can then be used to classify a day as a dry- and wet-snow avalanche day (AvD) or non-avalanche day.

avalanche

display_name: avalanche

climate-change

display_name: climate-change

climate-projections

display_name: climate-projections

dry-snow-avalanche

display_name: dry-snow-avalanche

snow

display_name: snow

snow-instability

display_name: snow-instability

snow-stratigraphy

display_name: snow-stratigraphy

wet-snow-avalanche

display_name: wet-snow-avalanche

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.


en: graubunden climate-change switzerland snow alpine3d-simulations

en: Simulation data

en: Reference data as well as the 2050 and 2099 scenarios for ARPEGE and ETHZ other RCMs available on demand)

en: Configuration file

en:
This is the simulation dataset from _"Response of snow cover and runoff to climate change in high Alpine catchments of Eastern Switzerland"_, M. Bavay, T. Grünewald, M. Lehning, Advances in Water Resources 55, 4-16, 2013

A model study on the impact of climate change on snow cover and runoff has been conducted for the Swiss Canton of Graubünden. The model Alpine3D has been forced with the data from 35 Automatic Weather Stations in order to investigate snow and runoff dynamics for the current climate. The data set has then been modified to reflect climate change as predicted for the 2021-2050 and 2070-2095 periods from an ensemble of regional climate models.

The predicted changes in snow cover will be moderate for 2021-2050 and become drastic in the second half of the century. Towards the end of the century the snow cover changes will roughly be equivalent to an elevation shift of 800 m. Seasonal snow water equivalents will decrease by one to two thirds and snow seasons will be shortened by five to nine weeks in 2095.

Small, higher elevation catchments will show more winter runoff, earlier spring melt peaks and reduced summer runoff. Where glacierized areas exist, the transitional increase in glacier melt will initially offset losses from snow melt. Larger catchments, which reach lower elevations will show much smaller changes since they are already dominated by summer precipitation.

graubunden

display_name: graubunden

switzerland

display_name: switzerland

en: Alpine3D simulations of future climate scenarios for Graubunden


maintainer: Maria Elvira Murazzi

en: nanoplastic 13c-labelling uptake forest-trees polystyrene

en: Nanoplastic in forests experiment

en:
Data embargoed until August 2022, and it will be provided upon request

-  excel file containing: two working sheets (leaf supply and root supply experiment) with a table with the values 13C-nanopolystyrene in the different tissues of the two forest tree species; graph showing the differences between controls and treatments of 13C-nanopolystyrene enrichment for each tissue of each forest tree species; ANOVA table showing significant values after having exposed the tree species to 13C-nanopolystyrene

en:
The fate of plastic in the environment is of global concern, because its production recently has
increased strongly and it accumulates in terrestrial and aquatic ecosystems. Although some knowledge on
its role in aquatic and terrestrial ecosystems was gained in the recent decade, hitherto very little is known
about the impact of micro and nanoplastics in forest ecosystems.

The aim of this pioneering project was to explore if nanoplastics are taken up by forest trees species
through leaves or roots. In greenhouse experiments, we exposed leaves or roots of seedling of two forest
trees species to solutions with highly 13C-labelled polystyrene nanoparticles (13C-nPS, 99 atom%) and
examined if they were incorporated in different above- and belowground tissues.

Treated part of the trees for both species showed significant 13C-enrichment, indicating that trees take up nanoparticles. However, the overall 13C signal strength in tissues that were not exposed to the 13C label remained low (Δδ13C<1‰) and was confined to a few seedlings, leaving it ambiguous whether nanoplastic transport occurs or not.

We acknowledge that the new method developed might be not sensitive enough to unequivocally detect
mechanisms of nanoplastic uptake and transport at environmentally realistic concentrations.

forest-trees

display_name: forest-trees

nanoplastic

display_name: nanoplastic

polystyrene

display_name: polystyrene

uptake

display_name: uptake

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: Nanoplastics in forests: Exploring the effects of nanoplastics on forest soils and tree physiology (NanoPlast)


maintainer: Camille Albouy

en: environmental-dna mitochondrial-dna barcoding actinopterygii teleo-primers atlantic-ocean 12s

en: This file contains the metadata associated with each 12 s mitochondrial sequence.

en: This file contains the metadata associated with each scientific survey

en: This file contains the 12s mitochondrial sequences for the Atlantic fishes collected on a French scientific survey (Evhoe) for stock assessment.

en:
Mitochondrial tree based on the 12s sequences obtained for altantic fish.
This data represent the maximum likelihood phylogenetic tree allowing to assess 1) the clustering of the different sequences generated in
this study and their closest sequences recovered through a MegaBLAST on GenBank, 2) the robustness of the clades and 3) the
phylogenetic dissimilarities through the branch length of the tree among the different sequences. This tree was built with IQtree2
using the best substitution model found by modelFinder. The robustness of the node was evaluated using 1000 ultra-fast bootstrap
(node information indicated on the right of the /) and SH-aLRT procedures (node information indicated on the left of the /), using a hillclimbing nearest neighbor interchange (NNI) search to reduce the risk of overestimating branch supports with ultra-fast Bootstrap
caused by too severe model violations.

en: This file contains the Teleo Barcode for the Atlantic fishes collected during a French scientific survey (Evhoe) for stock assessment.

en:
The global biodiversity crisis driven by anthropogenic pressures significantly threatens marine ecosystems functioning. The rate of climate change and the impacts of anthropogenic pressures outpacing the capabilities of our observation tools, stresses the need to develop new methods to assess these rapid modifications. Environmental DNA (eDNA; DNA traces released by organisms) metabarcoding has emerged as a non-invasive method that has been widely developed over the last decade. Thanks to a large spatio-temporal coverage, high detection of rare species and its time and cost effectiveness, eDNA metabarcoding represents a promising biomonitoring tool. However, capturing fish diversity using eDNA requires a high-quality genetic reference database, which we are currently still lacking. For the South European Atlantic shelf area, we estimated that only 41% of the fish species present were recorded in the available eDNA reference databases. Improving reference databases can notably rely on opportunistic sampling enabling the reporting of sequences for new species. Therefore, the data provided here consists of barcoding 95 species of ray-finned and cartilaginous fishes over the 12S mitochondrial DNA gene. We generated 168 12S barcodes from fishes that were sampled in the Bay of Biscay (Northeast Atlantic, France) between 2017 and 2019. We also provided the “Teleo” barcode associated with a specific 12S region for each individual. In addition to the sequences, we provided for each individual the taxonomy, the details associated with the barcode (Genbank accession number, chromatograms), a photograph, as well as 5 ecomorphological measures and 11 life-history traits. These traits document several functions such as dispersion, diet, habitat use, and position in the food web. Furthermore, we provided the metadata of each sampling site (date, station, sampling hour, gear, latitude, longitude, depth) and environmental variables measured in situ (conductivity, salinity, water temperature, water density, air temperature).
This data set is highly valuable to improve the Northeast Atlantic eDNA genetic database, thus helping to better understand the effects of environmental forcing in the Bay of Biscay, a transition zone housing mixed assemblages of boreal, temperate and subtropical fish species susceptible to display variability in functional traits to adapt to changing conditions.

actinopterygii

display_name: actinopterygii

atlantic-ocean

display_name: atlantic-ocean

barcoding

display_name: barcoding

environmental-dna

display_name: environmental-dna

mitochondrial-dna

display_name: mitochondrial-dna

teleo-primers

display_name: teleo-primers

en: ATLFISHREF A 12S mitochondrial reference dataset for metabarcoding Atlantic Fishes frequently caught during scientific surveys in the Bay of Biscay


modeling-snow-failure-with-dem

title_for_slug: modeling-snow-failure-with-dem

en: snow snow-avalanche discrete-element-modelling snow-failure snow-micro-mechanics

en: Read-me

en: The read-me file contains a description of all the data provided in the zip file.

en: Python file

en: Python file to reproduce the figures in Bobillier et al. (2019)

mimetype: text/x-python

en: Dataset

en: The zip file contains the data underlying the figures presented in Bobillier et al. (2019). The figures can be reproduced with the python file, which is also provided.

en: This data set includes the modeling results described in the research article by Bobiller et al. (2020). All the figures in the article can be reproduced with the data provided.

discrete-element-modelling

display_name: discrete-element-modelling

snow-avalanche

display_name: snow-avalanche

snow-failure

display_name: snow-failure

snow-micro-mechanics

display_name: snow-micro-mechanics

envidat

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Modeling snow failure with DEM


maintainer: Esther Frei

en: afforestation stillberg treeline mountain-forest long-term-experiment

mimetype: application/x-zip-compressed

en:
 Background information

The Stillberg ecological treeline research site in the Swiss Alps was established in 1975, with the aim to develop ecologically, technically, and economically sustainable reforestation techniques at the treeline to reduce the risk of snow avalanches. In the course of time, additional research aspects gained importance, such as the ecology of the treeline ecotone under global change. Long-term monitoring of the large-scale high-elevation afforestation has generated data about tree growth, survival, and vitality. In addition, detailed characteristics of the microsite conditions of the research were conducted. Besides providing a scientific basis and practical guidelines for high-elevation afforestation, this research has contributed to a comprehensive understanding of ecological processes in the treeline ecotone.

 Experiment description

The Stillberg afforestation experiment was established in 1975 by planting 92,000 seedlings of *Larix decidua*, *Pinus cembra* and *Pinus mugo* ssp. *uncinata* in the alpine treeline ecotone. The afforestation site is located on a northeast-facing slope with steep, topographically highly structured terrain and covers elevations from 2075 to 2230 m a.s.l. The afforestation site was divided into 4052 square plots of 3.5 × 3.5 m, arranged in a regular species-alternating pattern over the whole area. Each plot contained 25 trees of one species (1350 plots per species), and the seedlings were systematically planted 70 cm apart. The trees have been monitored since 1975. Specifically, tree mortality was assessed annually from 1975 until 1995 and has been documented every ten years since then, with surveys in 2005 and 2015 (the next survey is due in 2025). Height of the surviving trees was measured in 1975, 1979, 1982, 1985, 1990, 1995, 2005, and 2015. In 1995, 2005, and 2015, drivers of tree vitality were assessed for a subset of trees per plot. Additionally, an extensive set of environmental parameters characterizing microsite conditions of the afforestation area were recorded before and after the planting of the trees.

 Data description

The five datasets from the afforestation experiment comprise ecological and environmental data from the main afforestation experiment in five datasets with accompanying metadata (Stillberg_afforestation_all_metadata.xlsx). All data and metadata files are bundled in a ZIP-file (Stillberg_afforestation_v1.zip). In particular, a first dataset contains environmental data characterising microsite conditions of the 4000 plots with regard to soil, topography, vegetation and microclimatic conditions (Stillberg_afforestation_plot_data_v1.csv; Stillberg_afforestation_plot_metadata_v1.csv. In each plot, the natural tree regeneration was assessed by counting seedings of several tree species in 2005 and 2015 (Stillberg_afforestation_regeneration_data_v1.csv; Stillberg_afforestation_regeneration_metadata_v1.csv). Furthermore, specific information about each of the 92’000 planted trees of the tree species is available (Stillberg_afforestation_tree_parameter_data_v1.csv; Stillberg_afforestation_tree_parameter_metadata_v1.csv). Survival data for each of the 92’000 individual trees can be found in a separate dataset (Stillberg_afforestation_tree_survival_data_v1.csv; Stillberg_afforestation_tree_survival_metadata_v1.csv). Tree growth and vitality parameters are available for all trees from 1995, and for subsets of trees for 2005 and 2015 (Stillberg_afforestation_tree_measurements_data_v1.csv; Stillberg_afforestation_tree_measurements_metadata_v1.csv).

afforestation

display_name: afforestation

long-term-experiment

display_name: long-term-experiment

mountain-forest

display_name: mountain-forest

stillberg

display_name: stillberg

treeline

display_name: treeline

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: Long-term afforestation experiment at the Alpine treeline site Stillberg, Switzerland


maintainer: Rebecca Mott

en: terrestrial-laser-scanning riegl-vz6000 snow-ablation-rates patchy-snow-covers tls

en: Snowmask 2014

en: Digital Elevation Modell 2016

en: Gletschboden test site

en: Digital Elevation Modell 2015

en: Snowmask 2015

en: Digital Elevation Modell 2014

en: Snowmask 2016

en: We recorded snow ablation maps with a terrestrial laser scanner (TLS, Riegl-VZ6000) at the Gletschboden area. The TLS position is located approximately 30 vertical meters above the Gletschboden area at a northerly exposed slope. In total 44 TLS measurement sets have been conducted in three consecutive years 2014-2016 (2014: 13 measurements; 2015: 17 measurements; 2016: 14 measurements). The TLS system has a single-point measurement frequency of 300 kHz and a beam divergence of 0.007°. This set-up allows a horizontal resolution of approximately 0.01 m in 100 m distance to the TLS position. One scan of the Gletschboden area lasts approximately 15 minutes. The travel time from the laser scanner towards the surface is recorded and afterwards converted into a point cloud of distances. 5 reflectors located at the Gletschboden area and in the closer surroundings were additionally scanned during each measurement to transform the point cloud from the scanner own coordinate system into Swiss coordinates. Additionally, orthophotos have been created by using pictures recorded from the TLS in order to provide snow mask maps. Snow and bare ground can be distinguished by the RGB color information of the orthophoto. Cells with blue band information greater than 175 were categorized as snow and all cells with values smaller or equal 175 were categorized as bare ground.

patchy-snow-covers

display_name: patchy-snow-covers

snow-ablation-rates

display_name: snow-ablation-rates

terrestrial-laser-scanning

display_name: terrestrial-laser-scanning

tls

display_name: tls

en: DISCHMEX - High-resolution daily snow ablation rates in an Alpine environment


maintainer: Océane Hames

en: snow-transport openfoam arctic-sea-ice antarctica snow-deposition mosaic

en: Snowdrift measurements around Neumayer Station III

en: Files containing the topographical data barometrically measured in June 2009 around the German Antarctic Research station Neumayer III. Those measurements are compared to the snowBedFoam simulations to assess the ability of the model to reproduce real snow distribution observations.

en:
OpenFOAM-2.3.0. scripts containing the implemented Eulerian-Lagrangian snow transport model.

The code file provided here is not updated. The most recent version of the script can be found on the WSL/SLF GitLab repository: https://gitlabext.wsl.ch/atmospheric-models/snowbedfoam-v1-0.git

en: Neumayer III simulations

en:
Snow distribution results around Neumayer Station III obtained for the sensitivity analysis and comparison to measurements. The file contains several sub-folders, namely:
-COMP: simulation output for the comparison to measurements;
-FLOW: simulation output for the study of wind forcing impact;
-simulation_exampleCase: example case of a snowBedFoam simulation with the reference Neumayer Station mesh;
-SNOW: simulation output for the study of snow properties impact;
-STRUCT: simulation output for the study of structure properties impact.

en: Paper Draft

en: This is the initial draft of the paper where the snowBedFoam 1.0. results are tested against Terrestrial Laser Scan (TLS) measurements of snow dynamics on Arctic sea ice (MOSAiC expedition). It highlights the numerical limitations of our model as well as the measurement uncertainties, which may occur in such extreme environments.

en: MOSAiC Met City preliminary (Level 2) wind data

en:
Extract from the preliminary MOSAiC atmospheric data (Level 2) for the time period 6th to 13th of November, 2019.
This data was used to set up the fluid forcing parameters in the snowBedFoam simulations on MOSAiC sea ice. It is being published in this repository with the kind permission from Matthew Shupe and his team.
The final processed and quality controlled version of this dataset (Level 3) has not been published yet. A complete reference will be added in this description once it is released.

en:
OpenFOAM-5.0 scripts containing the implemented Eulerian-Lagrangian snow transport model.
The code file provided here is not updated. The most recent version of the script can be found on the WSL/SLF GitLab repository: https://gitlabext.wsl.ch/atmospheric-models/snowbedfoam-v1-0.git

en:
snowBedFoam 1.0. is a snow transport solver implemented in the computational fluid dynamics software OpenFOAM. It is adapted from the standard multi-phase flow solver DPMFoam for application in snow-influenced environments.
To simulate aeolian snow transport, snowBedFoam 1.0. handles coupled Eulerian–Lagrangian phases, which involve a finite number of particles (snow) spread in a continuous phase (air). The snow erosion and deposition are modelled through physics-based equations similar to the ones employed in the well-established LES-Lagrangian Stochastic Model (Comola and Lehning, 2017 ; Sharma et al., 2018 ; Melo et al., 2022). This modelling approach is computationally intensive and thus adapted to simulate snow movement and distribution on small scale terrain.
First, snowBedFoam 1.0. was applied to topographical data collected on Arctic sea ice during the MOSAiC expedition (Clemens-Sewall, 2021). Together with atmospheric data from the MOSAiC Met City (Shupe et al., 2021) used for the fluid forcing, the model was able to accurately simulate the zones of erosion and deposition of snow along a complex ice ridge structure (Hames et al., 2022).
Second, snowBedFoam 1.0. was used to simulate the snow distribution around the German Antarctic research station Neumayer Station III. The effect of snow properties, fluid forcing and aerodynamic structures on the snow accumulation were assessed.
snowBedFoam 1.0 was implemented in 2 different OpenFOAM versions, namely OpenFOAM-2.3.0 and OpenFOAM-5.0. The latter offers more options for turbulence models and boundary conditions. The fundamental model equations were not changed from one implementation to the other, thus both still correspond to snowBedFoam 1.0. The two branches are called snowBedFoam-v1-2.3.0 (OpenFOAM-2.3.0) and snowBedFoam-v1-5.0 (OpenFOAM-5.0). The core codes of snowBedFoam 1.0. are directly accessible on the WSL/SLF GitLab repository (more details in the Resources section).

antarctica

display_name: antarctica

arctic-sea-ice

display_name: arctic-sea-ice

mosaic

display_name: mosaic

openfoam

display_name: openfoam

snow-deposition

display_name: snow-deposition

snow-transport

display_name: snow-transport

envidat

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: snowBedFoam: an OpenFOAM Eulerian-Lagrangian solver for modelling snow transport


maintainer: EnviDat

en: csv nead metadata-convention meteorological-data-format research-data-management

en: PyNEAD (future reference implementation)

en: MeteoIO (future reference implementation)

format: HTML

mimetype: text/html

en: NEAD on GitHub

media_type: text/html

en: NEAD syntax v0.1 (EBNF)

en:
Important note: From 2025 the NEAD format is being transformed into the interoperable CSV (iCSV) format, a formalized and standardized evolution of the NEAD format. Furthermore, iCSV should be backwards compatible with NEAD. More information on the new iCSV format will be linked here in due time.

Acknowledgement: The NEAD format includes NetCDF metadata and is proudly inspired by both SMET and NetCDF formats. NEAD is designed as a long-term data preservation and exchange format.

The NEAD specifications were presented at the "WMO Data Conference 2020 - Earth System Data Exchange in the 21st Century" (Virtual Conference).

-----------------------

Summary:
The Non-Binary Environmental Data Archive (NEAD) format is being developed as a generic and intuitive format that combines the self-documenting features of NetCDF with human readable and writeable features of CSV. It is designed for exchange and preservation of time series data in environmental data repositories.

License: The NEAD specifications are released to the public domain under a Creative Commons CC0 "No Rights Reserved" international license. You can reuse the information contained herein in any way you want, for any purposes and without restrictions.

csv

display_name: csv

metadata-convention

display_name: metadata-convention

meteorological-data-format

display_name: meteorological-data-format

nead

display_name: nead

research-data-management

display_name: research-data-management

educ

en: Education, culture and sport

en: EnviDat: the Environmental Data Portal

en: Non-Binary Environmental Archive Data (NEAD) format


en: measurements soil-texture lwc glide-snow-avalanche soil soil-classification matric-potential alpine

en: Daily averaged values used for the direct fitting

en: Complete list of the van Genuchten parameter values for each soil and method

en: Hydrus files used for the inverse fitting

en: Texture data of the soil locations

en: Coordinates of each soil location, location of the snow profiles, and location of the snow liquid water content measurements

en: Detailed information of each file in the dataset

en: The dataset contains measured values of soil liquid water content, matric potential, and soil texture of 40 soil samples in Davos, Switzerland. The measurements were used for determining van Genuchten parameter values through fitting of water retention curves, pedotransfer functions, and inverse fitting with Hydrus-1D.

alpine

display_name: alpine

glide-snow-avalanche

display_name: glide-snow-avalanche

lwc

display_name: lwc

matric-potential

display_name: matric-potential

measurements

display_name: measurements

soil

display_name: soil

soil-classification

display_name: soil-classification

soil-texture

display_name: soil-texture

en: Soil measurements of Seewer Berg and Davos


maintainer: Alec van Herwijnen

en: snow-mechanics microstructure snow slab-avalanche strength depth-hoar

en: Experimental Data: Contains results of the compression experiments and microstructural parameters.

en:
CT Reference Data: Contains sample names, positions, evaluated regions and microstructural parameters based on data from the RHOSSA and MOSAiC campaigns.
MOSAiC:
https://mosaic-portal.org/data/open-mcs/vessel/polarstern/sn_microct/sn_microct/exdata/
https://doi.org/10.1594/PANGAEA.952794
RHOSSA:
https://doi.org/10.16904/envidat.151

en: Time series data: Contains the CT data of upper slab, weak layer and lower slab used to evaluate the temporal evolution within the artificial samples.

en: Parent sample variability: Contains the CT data used to estimate the parent sample variability.

en:
This repository hosts the experimental data accompanying our publication, “On the compressive strength of weak snow layers of depth hoar,” featured in the Journal of Glaciology.

-Compressive Strength Data:
Measurements of the compressive strength for 92 artificially grown weak snow samples.
-Microstructural CT Data:
CT-derived microstructural information for each sample, including:
Density
Specific surface area
Connectivity density
Correlation lengths
Anisotropy
-Additional CT Data:
Parent Sample Variability: CT data used to assess the variability of the parent samples.
Temporal Evolution: CT data capturing the evolution within the artificial weak layers.
Reference Data: Information on the reference CT data sourced from the RHOSSA and MOSAiC campaigns.

depth-hoar

display_name: depth-hoar

microstructure

display_name: microstructure

slab-avalanche

display_name: slab-avalanche

snow

display_name: snow

snow-mechanics

display_name: snow-mechanics

strength

display_name: strength

envidat

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.


en: prokaryotes soil-microbiome microbial-biodiversity latitudinal-gradient soil-mulitfunctionality fungi

en: Metadata, soil properties and soil microbial functions for each sites across the European gradient.

en: 16S_Han et al_EUgradient.xlsx

en: Diversity of prokaryotes (16S gene sequencing) containing: 1) ASV (Amplicon Sequence Variants) table: abundance of ASV in each sample and 2) Taxonomy table: taxonomic classification of each ASV.

en: ITS_Han et al_EUgradient.xlsx

en: Diversity of fungi (ITS region sequencing) containing: 1) ASV (Amplicon Sequence Variants) table: abundance of ASV in each sample and 2) Taxonomy table: taxonomic classification of each ASV.

en: The diversity and network complexity of prokaryotic and fungal communities and their relationships with soil multifunctionality (SMF) – an integrative index for C-, N- and P-cycling functions – was investigated along a 3,000-km latitudinal transect across Europe (37° to 62°N), spanning biomes from Mediterranean drylands, temperate to boreal forests.

fungi

display_name: fungi

latitudinal-gradient

display_name: latitudinal-gradient

microbial-biodiversity

display_name: microbial-biodiversity

prokaryotes

display_name: prokaryotes

soil-microbiome

display_name: soil-microbiome

soil-mulitfunctionality

display_name: soil-mulitfunctionality

educ

en: Education, culture and sport

en: EnviDat: the Environmental Data Portal

en: Soil microbial diversity and multifunctionality across European biomes


en: meteorology wind-speed meteo climate-change long-term swiss-forest-lab par relative-humidity precipitation temperature

en: Site aerial photo (Schänis)

en: Site aerial photo from both Schänis stations. Source: Google. 2016. Site aerial photo from both Schänis stations. Retrieved November 11, 2016, from https://www.google.ch/maps

en: Data plot of the field station (SCF)

en: Data overview for air temperature, relative humidity, precipitation, PAR, wind speed.

en: Forest station data (SCB)

en: Data file.

en: Site photo of the forest station (SCB)

en: Site photo of the forest station from below (viewing upwards the slope).

en: Further details on the data repository

en: Meta data documentation.

en: Field station data (SCF)

en: Site photo of the field station (SCF)

en: Site photo of the field station from above (viewing downwards the slope).

en: Data plot of the forest station (SCB)

en: High quality meteorological data are needed for long-term forest ecosystem research, particularly in the light of global change. The long-term data series published here comprises almost 20 years of measurements for two meteorological stations in Schänis in Switzerland where one station is located within a natural mixed forest stand (SCB) with European beech (_Fagus sylvatica_; 130-150 yrs), European silver fir (_Abies alba_; 130-150 yrs) and European ash (_Fraxinus excelsior_; 130-150 yrs) as dominant tree species. A second station is situated in the very vicinity outside of the forest (field station, SCF). The meteorological time series are presented in hourly time resolution of air temperature, relative humidity, precipitation, photosynthetically active radiation (PAR) and wind speed. Schänis is part of the Long-term Forest Ecosystem Research Programme (LWF) established and maintained by the Swiss Federal Research Institute WSL.

climate-change

display_name: climate-change

long-term

display_name: long-term

meteo

display_name: meteo

meteorology

display_name: meteorology

par

display_name: par

precipitation

display_name: precipitation

relative-humidity

display_name: relative-humidity

swiss-forest-lab

display_name: swiss-forest-lab

temperature

display_name: temperature

wind-speed

display_name: wind-speed

en: Schänis, Switzerland: Long-term forest meteorological data from the Long-term Forest Ecosystem Research Programme (LWF), from 1998 onwards


en: snowpack avalanche-forecast avalanche snow snow-stability-evaluation

en: Stability tests

en: Stability tests including csv-files with CT, ECT and PST experiments for each year and each field site.

en: README

en: README file explaining data structure and content

en: SNOWPACK simulations

en: This dataset contains all SNOWPACK simulations, including input files, setup and output files.

en: Manually observed snow profiles

en: Manually observed snow profiles as csv-files containing depth [cm], thickness [cm], density [kg m-3], hand hardness, first grain type, second grain type, first grain size [mm], and second grain size [mm] of each layer.

en: Extracted data

en: Extracted data contain validation and results published in Richter et al. (2019).

en:
To validate the critical crack length as implemented in the snow cover model SNOWPACK, PST experiments were conducted for three winter seasons (2015-2017) at two field site above Davos, Switzerland. This dataset contains manually observed snow profiles and stability tests. Furthermore, corresponding SNOWPACK simulations are included.
These data were analyzed and results were published in Richter et al. (2019).

Please refer to the Readme file for further details on the data.

These data are the basis of the following publication:
Richter, B., Schweizer, J., Rotach, M. W., and van Herwijnen, A.: Validating modeled critical crack length for crack propagation in the snow cover model SNOWPACK, The Cryosphere, 13, 3353–3366, https://doi.org/10.5194/tc-13-3353-2019, 2019.

avalanche

display_name: avalanche

avalanche-forecast

display_name: avalanche-forecast

snow

display_name: snow

snow-stability-evaluation

display_name: snow-stability-evaluation

snowpack

display_name: snowpack

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Validating and improving the critical crack length in SNOWPACK


en: sdms precipitation frost-change-velocity aridity ground-temperature soil

en: Mean annual temperature modified from CHELSA

media_type: image/tiff

en: Frost change frequency modified from CHELSA

format: TIFF

en: Soil clay content modified from SoilGrids

en: Precipitation seasonality from CHELSA

en: Soil organic carbon content modified from SoilGrids

en: Soil pH modified from SoilGrids

en: Precipitation of driest quarter modified from CHELSA

en: Mean diurnal range modified from CHELSA

en: The dataset contains seven environmental layers (average annual temperature, aridity [annual precipitation divided by annual potential evapotranspiration], frost change frequency, precipitation in the driest quarter, mean diurnal temperature range, and precipitation seasonality) modified from CHELSA (https://chelsa-climate.org/) and three soil layers (soil organic matter content, pH water, and clay content) modified from SoilGrids (https://soilgrids.org/).

aridity

display_name: aridity

frost-change-velocity

display_name: frost-change-velocity

ground-temperature

display_name: ground-temperature

sdms

display_name: sdms

soil

display_name: soil

en: Environmental layers for SDM simulations (GDPlants)


maintainer: Nander Wever

en: snow-depth precipitation-amount air-temperature wind-speed shortwave-radiation longwave-radiation wind-direction snow-ice-temperature humidity

en: Version 2

en:
Deprecated version. Release notes:

Bug fix: in v1, incoming radiation components were taken from WFJ_Gipfel station, instead of WFJ Versuchsfeld.

en: SNOWPACK ini file (new syntax)

en: This ini-file can be used to run SNOWPACK simulations with the WFJ data set, using the new MeteoIO Filter, Generator and Interpolation syntax.

en: Version 5

en:
Deprecated version. Release notes:

Update: using the incoming and outgoing short- and longwave radiation data from the new processing chain from 2010 onwards, filling also data gaps in pre-2010 data.

Update: dataset extended to 2016-10-04T00:30

Update: refreshing data originating from MeteoSwiss (particularly precipitation)

en: Version 1

en:
Deprecated version. Release notes:

First release of dataset.

en: Version 3

en:
Deprecated version. Release notes:

Bug fix: in version 2, the undercatch correction was not applied correctly

Bug fix: in version 2, snow lysimeter data was missing for extended periods of time

Update: dataset extended to 2016-01-02T00:30

Update: refreshing data originating from MeteoSwiss (particularly precipitation)

en: Version 7 (current)

en:
Release notes:

Bug fix: in previous versions, snow lysimeter data from September 2010 onwards was erroneously reported for UTC+2, instead of UTC+1 (i.e., reported one hour later than should have been).

Update: dataset extended to 2017-07-11T00:30.

en: All versions

en: Undercatch correction

en: This document describes how the undercatch correction for the Weissfluhjoch measurement site was determined.

en: SNOWPACK sno file

en: This sno-file can be used to run SNOWPACK simulations with the WFJ data set, using version 3.4.0 or higher.

en: Version 4

en:
Deprecated version. Release notes:

Update: dataset extended to 2016-09-02T00:30

Update: refreshing data originating from MeteoSwiss (particularly precipitation)

en: Version 6

en:
Deprecated version.

Release notes:

- Missing ISWR for 2009-09-30 and 2010-04-30 has been replaced by data from WFJ Gipfel

This dataset is the basis for the Weissfluhjoch dataset in ESM-SnowMIP (doi: http://dx.doi.org/10.16904/16).

en: SNOWPACK ini file (old syntax)

en: This ini-file can be used to run SNOWPACK simulations with the WFJ data set, using version 3.4.0 or higher.

en:
Dataset of meteorological and snowpack measurements from the automatic weather station at Weissfluhjoch, Davos, Switzerland, suitable for driving snowpack models. The dataset contains standard meteorological measurements, and additionally snowpack runoff data from a snow lysimeter. Where possible, data is quality checked and missing data are replaced from backup sensors from the measurement site itself, or (in only a few cases) from the MeteoSwiss weather station at 470 m distance and 150 m above the measurement site.

Publication
Wever, N., Schmid, L., Heilig, A., Eisen, O., Fierz, C., and Lehning, M. Verification of the multi-layer SNOWPACK model with different water transport schemes. 2015. The Cryosphere. Volume 9. 2271-2293. http://dx.doi.org/10.5194/tc-9-2271-2015.

air-temperature

display_name: air-temperature

humidity

display_name: humidity

longwave-radiation

display_name: longwave-radiation

precipitation-amount

display_name: precipitation-amount

shortwave-radiation

display_name: shortwave-radiation

snow-depth

display_name: snow-depth

snow-ice-temperature

display_name: snow-ice-temperature

wind-direction

display_name: wind-direction

en: WFJ_MOD: Meteorological and snowpack measurements from Weissfluhjoch, Davos, Switzerland


en: crack-propagation numerical-simulations crack-speed weak-layer field-data dry-snow-avalanche

format: OCTET

en: Video analyze data cross slope

en: Field data PST <30deg

en: DAM data slope terrain

en: Field data PST >30deg

en: MPM data slope terrain

en: Video analyze data up-slope

en: DEM data flat terrain

en: MPM data flat terrain

en:
Compilation of normalized crack-propagation speeds (expressed as a fraction of the slab shear-wave speed).
The dataset contains crack-propagation speeds from DEM simulations (79 flat and 6 tilted; Bobillier et al., 2024), MPM simulations (48 flat and 191 tilted; Trottet et al., 2022), and field measurements: PSTs (222 data points, including 192 from low-angle terrain < 30°; van Herwijnen et al., 2016) and avalanche-video analyses (6 cross-slope and 5 down-slope speeds; Trottet et al., 2022).
The dataset also includes Python scripts that generate the relative-frequency distribution of the compiled, normalized crack-propagation speeds.
Bobillier, G., Bergfeld, B., Dual, J., Gaume, J., van Herwijnen, A., 55 and Schweizer, J.: Numerical investigation of crack propagation regimes in snow fracture experiments, https://doi.org/10.1007/s10035-024-01423-5 2024
Trottet, B., Simenhois, R., Bobillier, G., Bergfeld, B., van Herwijnen, A., Jiang, C. F. F., and Gaume, J.: Transi- 55 tion from sub-Rayleigh anticrack to supershear crack propagation in snow avalanches, Nat. Phys., 18, 1094–1098, https://doi.org/10.1038/s41567-022-01662-4, 2022.
van Herwijnen, A., Gaume, J., Bair, E. H., Reuter, B., Birkeland, K. W., and Schweizer, J.: Estimating the effective elastic modulus and specific fracture energy of snowpack layers from field experiments, J. Glaciol., 62, 997–1007, https://doi.org/10.1017/jog.2016.90, 2016a.

crack-propagation

display_name: crack-propagation

crack-speed

display_name: crack-speed

dry-snow-avalanche

display_name: dry-snow-avalanche

field-data

display_name: field-data

numerical-simulations

display_name: numerical-simulations

weak-layer

display_name: weak-layer

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Compilation of normalized  crack propagation speeds


maintainer: Markus Schlegel

en: metabarcoding monitoring air-sampling spore-dispersal environmental-dna

en: Data files and analysis scripts (Version 1)

en: This ZIP archive contains the data and source code necessary to reproduce the analyses for the manuscript "A case study on the application of spore sampling for the monitoring of fungi". Please refer to README.pdf inside the archive for more information.

en: Data files and analysis scripts (Version 2)

en: This ZIP archive contains the data and source code necessary to reproduce the analyses for the manuscript "A case study on the application of spore sampling for the monitoring of macrofungi". Please refer to README.pdf inside the archive for more information.

en:
Resources associated with the manuscript *A case study on the application of spore sampling for the monitoring of macrofungi* ([Schlegel et al. 2024](https://doi.org/10.1111/1755-0998.13941)).
Airborne environmental DNA (eDNA) monitoring of fungi was evaluated on a species-rich grassland site. Extensive fruiting body surveys yielded 29 waxcap and clavarioid species, 19 of which were also detectable in air eDNA. The analysis indicates that spores of locally occurring fruiting bodies were detected, in addition to a large diversity of common fungal species, while rare and threatened species were under-represented in the air.
*Version 1* of the dataset was submitted during the review phase. *Version 2* contains minor changes and clarifications, and is up to date with the [published supplement](https://onlinelibrary.wiley.com/action/downloadSupplement?doi=10.1111%2F1755-0998.13941&file=men13941-sup-0001-AppendixS1.pdf) of the study.
The contents of the ZIP archive:
* analysis scripts in [R-Markdown](https://rmarkdown.rstudio.com) format, including the rendered PDF output with figures and tables (*analysis* directory)
* eDNA sample metadata (*amplicon_meta*) and results of the amplicon clustering (*amplicon_data*) and the source code of the pipeline (*amplicon_pipeline*)
* positions of all fruiting body groups found in the surveys (3838 GPS points) (*surveys*)
* positions of the spore traps, taxonomy of studied grassland fungi and red-list species, and many more resources
Please refer to `README.pdf` inside the archive for a complete description of the file structure and information on how to reproduce the analyses.

air-sampling

display_name: air-sampling

environmental-dna

display_name: environmental-dna

metabarcoding

display_name: metabarcoding

monitoring

display_name: monitoring

spore-dispersal

display_name: spore-dispersal

en: Supporting information for case study on the application of spore sampling for the monitoring of macrofungi


maintainer: Manuel R. Popp

en: photo testing vascular-plants species-observations plant-species

en:
Zipped directory containing approximately 5'600 photographs of vascular plants from the Swiss flora, taken at 153 sampling locations. Sampling locations were assigned a TypoCH habitat type.
Folder structure:
 - Each folder represents a plant population, defined by the same species, sampling date, and location.
 - Higher-level directories organize populations observed within the same sampling plot.
Naming convention:
Each image is names img_<index>_<plant organ>.jpg whereby <index> is the number of the photograph within the folder. For each observed population, images have consecutive integers as index. <plant organ> is a single letter indicating the depicted part(s) of the plant:
b = bark
i = inflorescense
f = infructescense
s = several parts
v = vegetative parts

en:
This data set contains roughly 5600 photographs of plants and plant parts from 153 sites recorded in all major biogeographic regions of Switzerland using smartphone cameras. Image names contain a letter referring to depicted plant parts: b = bark, i = inflorescence, f = infructescense, s = several parts, v = vegetative parts.
Photos are grouped in folders by observation (individual or population), i.e., photos in the same folder are of the same species, observed at the same time and sampling plot. At a higher organisational level, these folders are grouped by sampling plot (usually 3×3 m in open areas and 10×10 m in forests). The main folder contains metadata including taxon name, sampling time and location, as well as the TypoCH habitat type encoded as integers.
This data set accompanies the following publication:
Popp, M. R., Zimmermann, N. E. & Brun, P. Evaluating the use of automated plant identification tools in biodiversity monitoring—a case study in Switzerland. _Ecological Informatics_ **103316** (2025) doi:[10.1016/j.ecoinf.2025.103316](https://doi.org/10.1016/j.ecoinf.2025.103316).

photo

display_name: photo

plant-species

display_name: plant-species

species-observations

display_name: species-observations

testing

display_name: testing

vascular-plants

display_name: vascular-plants

en: Photos of vegetative and reproductive parts of 560 vascular plant species taken in all biogeographic regions of Switzerland


maintainer: Stephan Zimmermann

en: mass-balance sustainability nutrient soil beech

en: With this study, our aim was to estimate the nutrient fluxes relevant for assessing nutrient sustainability as accurately as possible and to calculate nutrient balances for alternative forest management scenarios. Furthermore, we tested whether mapping units from existing geologic maps can serve as a basis for forest practitioners to estimate nutrient sustainability or whether more detailed data is needed. Positive fluxes include deposition and weathering, while negative fluxes include losses due to leaching and nutrient removal through timber harvesting in the balance. Weathering and leachate losses were modeled with a geochemical model. The SwissStandSim model was used to simulate the biomass growth under different harvesting and silvicultural strategies, allowing sustainability to be assessed for each nutrient at a given intensity of use. This assessment was made per rotation period of 100 years based on two criteria: i) nutrient supply; and ii) total stocking volume.

beech

display_name: beech

mass-balance

display_name: mass-balance

nutrient

display_name: nutrient

soil

display_name: soil

sustainability

display_name: sustainability

en: Nutrient sustainability in beech forests


maintainer: Achille Capelli

en: swe gps liquid-water-content gnss lwc snow snow-water-equivalent

en: GNSS derived SWE, LWC and HS from Klosters (1210 m a.s.l. ,46°51’49’’N, 9°53’17’’E) for the two winters 2018-20

en: Daily data from Küblis at 820 m a.s.l. (46°54’48’’N, 9°46’54’’E) for the two winters 2018-2020. These data were processed to daily values from the other data files.

en: Daily data for the site Weissfluhjoch at 2540 m a.s.l (46°49’47’’ N, 9°48’34’’E) for the two winters 2018-2020. These data were processed to daily values from the other data files.

en: Snow profiles data for the site Weissfluhjoch at 2540 m a.s.l (46°49’47’’ N, 9°48’34’’E) for the two winters 2018-2020.

en: GNSS derived SWE, LWC and HS from Küblis at 820 m a.s.l. (46°54’48’’N, 9°46’54’’E) for the two winters 2018-20

en: GNSS derived data for Laret at 1510 m a.s.l. (46°50’2’’N, 9°52’17’’E) for the two winter 2018-2020.

en: Daily observer data from Küblis at 820 m a.s.l. (46°54’48’’N, 9°46’54’’E) for the two winters 2018-2020.

en: Snow and meteo data from automatic sensors from Klosters (1210 m a.s.l. ,46°51’49’’N, 9°53’17’’E) for the two winters 2018-2020.

en: Snow profiles data from Klosters (1210 m a.s.l. ,46°51’49’’N, 9°53’17’’E) for the two winters 2018-2020.

en: Snow and meteo data from automatic sensors from Küblis at 820 m a.s.l. (46°54’48’’N, 9°46’54’’E) for the two winters 2018-2020.

en: Manual profiles

en: Data of the traditional manual profiles for the locations Weissfluhjoch, Klosters and Küblis. For the location of Küblis there are no traditional manual profile data. We provided the data as both PDF and .CAAML format (See https://niviz.org/ or http://caaml.org/Schemas/V5.0/Profiles/SnowProfileIACS/CAAMLv5_SnowProfileIACS.pdf). Moreover, we added LWC and density profiles when available (all locations).

en: GNSS derived SWE, HS, and LWC for the site Weissfluhjoch at 2540 m a.s.l (46°49’47’’ N, 9°48’34’’E) for the two winters 2018-2020.

en: Snow and meteo data from automatic sensors for Laret at 1510 m a.s.l. (46°50’2’’N, 9°52’17’’E) for the two winter 2018-2020.

en: Daily observer data from automatic sensors from Klosters (1210 m a.s.l. ,46°51’49’’N, 9°53’17’’E) for the two winters 2018-2020.

en: Daily data for Laret at 1510 m a.s.l. (46°50’2’’N, 9°52’17’’E) for the two winters 2018-2020. These data were processed to daily values from the other data files.

en: Profile data for Laret at 1510 m a.s.l. (46°50’2’’N, 9°52’17’’E) for the two winter 2018-2020.

en: Daily observer data for the site Weissfluhjoch at 2540 m a.s.l (46°49’47’’ N, 9°48’34’’E) for the two winters 2018-2020.

en: Daily data from Klosters (1210 m a.s.l. ,46°51’49’’N, 9°53’17’’E) for the two winters 2018-2020. These data were processed to daily values from the other data files.

en: Webcam images

en: Webcam images showing some typical differences in the snow conditions at the four sites (Küblis, Klosters, Laret and Weissfluhjoch) for two time periods (14-18.3.2019 and 27.1-11.2.2020). Both time periods included a precipitation event with partial rain-on–snow occurring at the lower locations.

en: Snow and meteo data from automatic sensors for the site Weissfluhjoch at 2540 m a.s.l (46°49’47’’ N, 9°48’34’’E) for the two winters 2018-2020.

en: Snow profiles data from Küblis at 820 m a.s.l. (46°54’48’’N, 9°46’54’’E) for the two winters 2018-2020.

en: This database contains GNSS derived snow water equivalent (SWE), liquid water content (LWC), and snow height (HS) and reference data collected during the two winter 2018-2020 at 4 sites Weissfluhjoch (2540 m asl, 46°49’47’’ N, 9°48’34’’E), Laret (1515 m asl, . 46°50’2’’N, 9°52’17’’E), Klosters (1200 m asl, 46°51’49’’N, 9°53’17’’E), and Küblis (815 m asl, 46°54’48’’N, 9°46’54’’E).

gnss

display_name: gnss

gps

display_name: gps

liquid-water-content

display_name: liquid-water-content

lwc

display_name: lwc

snow

display_name: snow

snow-water-equivalent

display_name: snow-water-equivalent

en: Snow water equivalent measurements with low-cost GNSS receivers along a steep elevation gradient in the East-ern Swiss Alps


maintainer: Michael Lehning

en: paleoclimate natural-tracer stable-water-isotopes weissfluhjoch post-depositional-processes snow latent-heat sublimation

en: Stable water isotopes in snow

en: Stable water isotopes in snow measurements

en: Weather

en: Meteorological data, snow height measurement, and SNOWPACK simulations covering the different field campaigns.

en: Details about the different folders

en:
Details on the data collected during the different field campaigns and available in this dataset.
Information on the sampling procedure of the snow isotopes samples.

en: Stable water isotopes in vapor

en:
Stable water isotopes in vapor measurements. Processed (calibrated) and raw data for February - June 2017. Raw data for January and February 2020.
For the time in between July 2017 and April 2020, raw vapor isotopic measurements are available, but no calibrations were performed during that time. For data delivery, please contact one of the authors.
This folder also contains the post-processing scripts for stable water isotopes in vapor measurements.

en:
Notice: Changes to the dataset are still possible. Please do not use this dataset until the final publication with a DOI. Contact the authors if you have questions about this.

This dataset contains measurements of stable water isotopes in snow and vapor on the Weissfluhjoch from different field campaigns (Winter 2017 (Trachsel, 2019), January 2020, December 2020, and March 2021 (Sadowski et al., 2022).
Snow profiles and surface samples are available at different frequencies for each campaign. Please see "Data_description.pdf" for details.

Scripts and SNOWPACK simulations used in (Trachsel, 2019) and (Sadowski et al., 2022) are also provided.

latent-heat

display_name: latent-heat

natural-tracer

display_name: natural-tracer

paleoclimate

display_name: paleoclimate

post-depositional-processes

display_name: post-depositional-processes

stable-water-isotopes

display_name: stable-water-isotopes

sublimation

display_name: sublimation

weissfluhjoch

display_name: weissfluhjoch

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Stable Water Isotopes in snow and vapor on the Weissfluhjoch


maintainer: EnviDat Support

en: photovoltaic snow irradiance albedo energy mountain reflection

en: PV Data

en: Windows users use the 7-zip app to extract the zip-file.

en:
 Overview
The SUNWELL Modelling Environment is a combination of data and code that models electricity production from satellite-derived irradiance data and other spatial data sets for all of Switzerland. This ensemble accompanies the publication "The bright side of PV production in snow-covered mountains", published in the Proceedings of the National Academy of Science and reproduces all results and figures of. Code and resources are in their original form (with documentation). A new version with a more generalized application to PV modelling and with more flexibility in terms of input and output formats will be released in the coming months.

 Format
All code is written and has to be executed in Matlab. The input and output data sets are also in the Matlab-specific .mat format. Whenever publicly available, the original data is provided as geotif, .xlsx or other common format.
This is the case for:

- Digital Elevation Model (InputsFromMatlab/MSG/OriginalData/ASTERDEM),
- Landsurface cover type (InputsFromMatlab/MSG/OriginalData/CORINE),
- Population Density (InputsFromMatlab/MSG/OriginalData/popdensRaster,
- Electricity production from three of our validation sites (/Validation/WSL),
- Measured irradiance for two validation sites (/Validation/ASRB)
The ‘Metadata’ documents in the respective folders provide further information about the data sources and processing. Figures are produced either in .pdf or .png format.

 Structure
The central level of the SUNWELL environment holds the 5 Mains, which run the different modelling aspects of the paper; each code is documented separately. Additional code is located in the ‘DataProcessing’ and the ‘functions’ folder. Functions are called in the different Mains.

‘InputsFromMatlab’ contains the radiation and albedo input data sets in separate subfolders (SIS/SISDIR/ALB). The original data is not publicly available, but can be requested for research purposes free of charge. We provide a processed subset of the data set that was used to run the SUNWELL simulations. The MSG subfolder contains additional spatial input data sets.

‘Outputs’ contains the output files from the different mains (matching names, Main_CHallpixels.m  Prod_CHallpixels)

‘Publication_figures’ contains all individual figures from the PNAS publication, as well as the generating code (/code_plot) and the power point figures (/ppts) that provide the combined final figures.

‘Validation’ contains the data sets used in the model validation:

- Electricity production from three of our validation sites (/WSL),
- Measured irradiance for two validation sites (/ASRB)

Electricity production from a validation site at Lac des Toules in Wallis (/LDT), this data set was provided under an NDA and cannot be made publicly available.

Paper Citation:
 > _Annelen Kahl; Jérôme Dujardin; Michael Lehning (2018). Dataset on PV Production in Snow Covered Mountains. PNAS - Proceedings of the National Academy of Sciences. (in press)_

albedo

display_name: albedo

energy

display_name: energy

irradiance

display_name: irradiance

mountain

display_name: mountain

photovoltaic

display_name: photovoltaic

reflection

display_name: reflection


en: hydrological-simulations soil-moisture discharge prevah precipitation low-flow drought-2018

en: Shapefile of 307 catchments in Switzerland

en: Shapefile of 307 catchments for which simulations of precipitation, discharge, soil moisture, and low flow are provided. The OBJECTID entry corresponds to the data columns in the textfiles of the simulated data provided.

en: Discharge

en: Simulated discharge for the 307 medium-sized catchments. The first column provides the date in the format YYYYMMDD. One column corresponds to one catchment. Unit: mm/d.

en: Low-flow storage

en: Simulated low-flow storage for the 307 medium-sized catchments. The first column provides the date in the format YYYYMMDD. One column corresponds to one catchment. Unit: mm.

en: Soil moisture

en: Simulated plant-available soil moisture for the 307 medium-sized catchments. The first column provides the date in the format YYYYMMDD. One column corresponds to one catchment. Unit: mm.

en: Precipitation

en: Simulated precipitation for the 307 medium-sized catchments. The first column provides the date in the format YYYYMMDD. One column corresponds to one catchment. Unit: mm/d.

en: The dataset provides simulated 1) precipitation, 2) discharge, 3) soil moisture, and 4) low-flow simulations for 307 medium-sized catchments in Switzerland for the period 1981-2018. The data were simulated using the hydrological model PREVAH in its gridded-version. The simulated time series are provided at daily resolution. A detailed description of the modeling approach can be found in Brunner et al. 2019 submitted to NHESS.

discharge

display_name: discharge

hydrological-simulations

display_name: hydrological-simulations

low-flow

display_name: low-flow

precipitation

display_name: precipitation

prevah

display_name: prevah

soil-moisture

display_name: soil-moisture

en: Hydro-meteorological simulations for the period 1981-2018 for Switzerland


en: snow-cover alpine3d-simulations snow alpine-precipitation snow-hydrology alpine3d snow-distribution

en: ADS datasets and simulation inputs

en: The file contains the ADS datasets of snow depth and input data used for simulations.

en:
Dataset (Model input, snow distribution and validation) for the precipitation scaling paper, which should be cited along with the data set citation.

This data is useful for distributed hydrological modelling or other tasks that involve the study of snow distribution and precipitation in the high Alpine.

The format of the data is for Alpine3D (models.slf.ch) model runs but other models could be used, too.

Please cite:

_Vögeli, C., Lehning, M., Wever, N., Bavay M., 2016: Scaling Precipitation Input to Spatially Distributed Hydrological Models by Measured Snow Distribution., Front. Earth Sci. 4: 108. doi: 10.3389/feart.2016.00108._

Dataset is provided as a single zip file.
The archive contains two directories, the valuable distributed snow depth maps for the landscape Davos and the simulation input.
The archive also contains the file: "ReadMeMetadataDataSetPrecipitationScaling" which explains the data structure.

alpine-precipitation

display_name: alpine-precipitation

snow

display_name: snow

snow-cover

display_name: snow-cover

snow-distribution

display_name: snow-distribution

snow-hydrology

display_name: snow-hydrology

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Precipitation Scaling Data Set (Vögeli et al., Frontiers)


maintainer: Marco Moretti

en: urban-biodiversity urbanization bettergardens wild-bees beekeeping gardens honeybees zurich resource-availability pollinator-experiment city4bees urban-ecosystems

en: Response and predictors used for the SEMs

en:
Mean, standard deviation , minimum and maximum values of six functional traits. The data has the following structure:
- Bee_species: bee scientific name
- mean_trait: mean value
- sd_trait: standard deviation
_min_trait: minimum value
- max_trait: maximum value
- trait: the six traits used. ITD = Intertegular distance (mm); Pheno.duration = duration of the phenology; Pheno.start = start of the phenology; Pheno.end = end of the phenology; Rel.tongue.length= relative tongue length (mm); Daytime.activity = daily activity (h)
DistNichePart: functional dissimilarity in a multidimentional trait space defined by five traits between wild bee individuals of a wild bee species and the honeybee individuals. Values are at the species level.

en: Metadata for the predictor and response dataset

en:
The data contains the following columns:

  SiteID: numeric, the identity of the garden where the bee was sampled.
  Taxonname: character, species name
  Lecty: numeric discreet, a mesure of specialisation degree. Levels: 1 = monolectic; 2=oliolectic; 3=polilectic
  Pheno.start= numeric discreet, the starting week of the flying activity.
  Pheno.end= numeric discreet, the ending week of the flying activity.
  Pheno.duration=numeric discreet, Pheno.end - Pheno.start
  Daytime.activity = numeric continuous, individual-level measure of the day hour when the bee was sampled
  ITD = numeric continuous, individual-level measure of the InterTegular Distance, a metric of mobility in mm.
  Rel.tongue.length =numeric continuous, individual-level measure of the relative tongue length (Tongue length / ITD), a metric of specilaisation degree, in mm.

en: Metadata for the predictors and response dataset

en:
Cities are socio-ecological systems that filter and select species, thus establishing unique species assemblages and biotic interactions. Urban ecosystems can host richer wild bee communities than highly intensified agricultural areas, specifically in resource-rich urban green spaces such as allotment and family gardens. At the same time, urban beekeeping has boomed in many European cities, raising concerns that the fast addition of a large number of managed bees could deplete the existing floral resources, triggering competition between wild bees and honeybees. The data has been used to investigated the interplay between resource availability and the number of honeybees at local and landscape scales and how this relationship influences wild bee diversity.

This dataset contains the raw and processed data supporting the findings from the paper: "Low resource availability drives feeding niche partitioning between wild bees and honeybees in a European city".

The data contains:
1. Bee trait measurements at the species and individual-level of five functional traits.
2. The values of the feeding niche partitioning (functional dissimilarity to honeybees)
3. The predictors of resource availability and beekeeping intensity at local and landscape scales used in the modelling of the paper for the 23 experimental sites.

beekeeping

display_name: beekeeping

bettergardens

display_name: bettergardens

gardens

display_name: gardens

honeybees

display_name: honeybees

pollinator-experiment

display_name: pollinator-experiment

resource-availability

display_name: resource-availability

urban-biodiversity

display_name: urban-biodiversity

urban-ecosystems

display_name: urban-ecosystems

urbanization

display_name: urbanization

wild-bees

display_name: wild-bees

zurich

display_name: zurich

en: Niche partitioning between wild bees and honeybees