maintainer: Chunhong Zhao

en: landscape land-use urban-morphology austin land-dynamics

en: Land use dynamics in Austin since 1992

en: The present dataset is part of the published scientific paper Zhao C, Weng Q, Hersperger A M. Characterizing the 3-D urban morphology transformation to understand urban-form dynamics: a case study of Austin, Texas, USA. Landscape and urban planning, 2020, 203:103881. The overall objective of this paper is to understand urban form dynamics in the Austin metropolitan area for the periods 2006–2011 and 2011–2016. The study also aims to understand to what extent the changes in the built environment (in terms of ‘efficient growth’ versus ‘inefficient growth’) from the 1990s to 2016 in the Austin metropolitan area corresponded with ‘compact and efficient growth’ planning policy documents. The UMT distribution can be found in the paper. The area of transitioning UMT was provided in Table 2 and Table 3 can be found in the Appendix of the paper. A protocol was developed to perform the content analysis of the strategic plans and gather the data. The detailed list of protocol items can be found in Appendix B of the paper. This study demonstrates the advantage of applying Lidar data to characterize 3-D urban morphology type (UMT) transition and understand its dynamics, which helps develop a comprehensive understanding of the urbanization process and provides a tool for planning intentions and policies evaluation on urban development over time. The UMT maps can be found in Appendix A of the paper. The Lidar point datasets and the 30 × 30 m National Land Cover Database (NLCD) are the two main data sources of UMT mapping. Lidar datasets were gathered from different projects that had been conducted and collected by state agencies and other organizations between 2007 and 2017. Table A1 in the appendix in the paper shows the accuracies and acquisition parameters of the Lidar projects from 2007 to 2017. Land use/cover dynamics in Austin metropolitan area dataset provides Land use/cover patterns in the years 1992, 2001, 2004, 2006, 2008, 2011, 2013, 2016 with a spatial resolution of 30 meters. Since NLCD 1992 used a different classification system for the urban land classes, we first reclassified the NLCD 1992 using a customized Arcpy package.

austin

display_name: austin

land-dynamics

display_name: land-dynamics

land-use

display_name: land-use

landscape

display_name: landscape

urban-morphology

display_name: urban-morphology

en: Land use/cover dynamics in Austin metropolitan area since 1992


automatic-detection-of-avalanches

maintainer: Matthias Heck

title_for_slug: automatic-detection-of-avalanches

en: snow hidden-markov-model seismic avalanche-activity monitoring

state: active

type: dataset

en: Results and Scripts

media_type: application/zip

en: This zip package contains the classification results, coherence results, reference data set, python scripts used for the classification and the start and end times for the pre-processed continuous seismic data. A further readme file is also include for more detailed information.

format: ZIP

mimetype: application/zip

en: This dataset contains the results obtained by an automatic classification using hidden Markov models of a continuous seismic dataset. To avoid long computational times, we reduced the seismic data using pre-processing step. The start and end times of the windows used for the classification are also included in this dataset. Furthermore, an avalanche reference data set is included and the python scripts used to perform the processing steps and the classification.

avalanche-activity

display_name: avalanche-activity

hidden-markov-model

display_name: hidden-markov-model

monitoring

display_name: monitoring

seismic

display_name: seismic

snow

display_name: snow

educ

fr: Éducation, culture et sport

de: Bildung, Kultur und Sport

en: Education, culture and sport

it: Istruzione, cultura e sport

envidat

fr: EnviDat: le portail de données environnementales

de: EnviDat: das Umwelt-Datenportal

en: EnviDat: the Environmental Data Portal

it: EnviDat: il portale dei dati ambientali

fr: EnviDat est le portail de données du WSL; il offre un accès uniformisé et réglementé aux données de surveillance et de recherche en matière d’environnement. Ce portail est capable d’héberger et de publier des ensembles de données précieuses et uniques, qui sont partagées aux quatre coins de la planète. Ce faisant, EnviDat favorise la recherche et contribue à l’avancement des sciences environnementales.

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

de: EnviDat ist das Datenportal der WSL für einen einheitlichen und verwalteten Zugang zu Umweltdaten aus Monitoring- und Forschungsprojekten. Auf dem Portal können Datensätze gehostet und veröffentlicht werden. Durch die weltweite Bereitstellung einzigartiger und wertvoller Datensätze leistet EnviDat einen Beitrag zur Forschung im Bereich der Umweltwissenschaften.

it: EnviDat è il portale dati del WSL che fornisce un accesso unificato e gestito ai dati di monitoraggio ambientale e di ricerca. Il portale ha la capacità di ospitare e pubblicare serie di dati preziosi e unici che vengono condivisi in tutto il mondo. Così facendo, EnviDat promuove la ricerca e contribuisce al progresso della scienza ambientale.

political_level: other

wsl

capacity: public

type: organization

approval_status: approved

key: guid

key: uri

value: Envidat Harvester

en: Automatic detection of avalanches


maintainer: Ueli Reber

en: bgb policy-documents policy-analysis text-corpus switzerland biodiversity environmental--policy

en: Replication files

format: SERVICE

en:
 Introduction

The ZIP file contains all data and code to replicate the analyses reported in the following paper.

Reber, U., Fischer, M., Ingold, K., Kienast, F., Hersperger, A. M., Grütter, R., & Benz, R. (2022). Integrating biodiversity: A longitudinal and cross-sectoral analysis of Swiss politics. *Policy Sciences*. [https://doi.org/10.1007/s11077-022-09456-4](https://doi.org/10.1007/s11077-022-09456-4)

If you use any of the material included in this repository, please refer to the paper. If you use (parts of) the text corpus, please also refer to the sources used for its compilation listed below. The content of the texts may not be changed.

 Data folder

The data folder contains the following files.

* _corpus.parquet_: Text corpus of Swiss policy documents
* _dict_de.csv_: Biodiversity dictionary (German)
* _dict_fr.csv_: Biodiversity dictionary (French)
* _dict_it.csv_: Biodiversity dictionary (Italian)
* _topic_labels.csv_: labels/codes for policy sectors
* _topics.csv_: labels/codes for policy sectors

The corpus and the dictionary were compiled by the authors specifically for this project. The labels/codes for policy sectors are based on the [coding scheme](http://ws-old.parlament.ch/affairs/topics) of the Swiss Parliament.

 Text corpus

The text corpus consists of 439,984 Swiss policy documents in German, French, and Italian from 1999 to 2018. The corpus was compiled from the following source between 2020-10-01 and 2021-01-31.

* Transcripts and parliamentary businesses (e.g. questions, motions, parliamentary initiatives) via the [Web Services (WS)](https://www.parlament.ch/de/%C3%BCber-das-parlament/fakten-und-zahlen/open-data-web-services) provided by the Swiss Parliament
* The official compilation of federal legislation ("Amtliche Sammlung", AS) via [opendata.swiss](https://opendata.swiss/de/dataset/official-compilation-of-federal-legislation-bs-as-1947-2018) provided by the Swiss Federal Archives (SFA)
* The federal gazette ("Bundesblatt") via [fedlex.admin.ch](https://www.fedlex.admin.ch/de/fga/index)
* Decisions of federal courts via [entscheidsuche.ch (ES)](https://entscheidsuche.ch/)

The corpus is stored in a single data frame to use with R saved as [PARQUET](https://parquet.apache.org/) file (corpus.parquet). The data frame has the following structure.

* _text_id_: Unique identifier for each text (source information as prefix, e.g. "t_")
* _doc_type_: Document type (see coding scheme below)
* _branch_: Government branche (1 legislative, 2 executive, 3 judicative)
* _stage_: Stage of policy process (1 drafting, 2 introduction, 3 interpretation)
* _year_: Year of publication
* _topic_: Policy sector (coding scheme in separate file in data folder)
* _lang_: Language (de, fr, it)
* _text_: Text

The following list contains the coding scheme for the doc_type variable.

* 101: Federal gazette // Draft for public consultation ("Vernehmlassungsverfahren")
* 102: Federal gazette // Explanation of draft for parliament ("Botschaft")
* 103: Federal gazette // Strategy, action plan
* 104: Federal gazette // Federal council decree ("Bundesratsbeschluss")
* 105: Federal gazette // (Simple) Federal decree ("(Einfacher) Bundesbeschluss")
* 106: Federal gazette // General decree ("Allgemeinverfügung")
* 107: Federal gazette // Treaty ("Übereinkommen")
* 108: Federal gazette // Treaty ("Abkommen")
* 109: Federal gazette // Draft for parliament ("Entwurf")
* 110: Federal gazette // Report ("Bericht")
* 111: Federal gazette // Report of parliamentary comission ("Bericht")
* 112: Federal gazette // Report of federal council ("Bericht")
* 201: Parl. businesses // Submitted text
* 202: Parl. businesses // Reason text
* 203: Parl. businesses // Federal council response
* 204: Parl. businesses // Initial situation
* 205: Parl. businesses // Proceedings
* 301: Parl. transcripts // Speech of MP
* 302: Parl. transcripts // Speech of federal council
* 401: Federal legislation // Legal text of the official compilation (law, ordinances, etc.)
* 501: Court decisions // Federal Supreme Court
* 502: Court decisions // Federal Criminal Court
* 503: Court decisions // Federal Administrative Court

 Code folder

The code folder contains all R code for the analyses. The files are numbered chronologically.

* _1_classifier_training.R_: Training of classifiers for classification of policy sectors
* _2_classifier_application.R_: Classification of documents in corpus
* _3_dictionary_application.R_: Biodiversity indexing of documents in corpus
* _4_stm_truncation.R_: Truncation of indexed documents to keep only relevant parts
* _5_stm_translation.R_: Translation of FR and IT documents to DE
* _6_stm_model.R_: Preprocesssing and structural topic model
* _7_plots.R_: Plots and numbers as included in the paper

The code/functions folder contains custom functions used in the scripts, e.g. to support topic model interpretation.

Package versions and setup details are noted in the code files.

 Contact

Please direct any questions to Ueli Reber (ueli.reber@eawag.ch).

bgb

display_name: bgb

biodiversity

display_name: biodiversity

environmental--policy

display_name: environmental--policy

policy-analysis

display_name: policy-analysis

policy-documents

display_name: policy-documents

switzerland

display_name: switzerland

text-corpus

display_name: text-corpus

en: Replication files for "Integrating biodiversity: A longitudinal and cross-sectoral analysis of Swiss politics"


maintainer: Matthias Haeni

en: par meteo relative-humidity long-term temperature climate-change swiss-forest-lab meteorology precipitation wind-speed

en: Site aerial photo (Jussy)

en: Site aerial photo from both Jussy stations. Source: Google. 2016. Site aerial photo from both Jussy stations. Retrieved November 11, 2016, from https://www.google.ch/maps

mimetype: image/jpeg

en: Forest station data (JUB)

media_type: text/csv

en: Data file.

format: CSV

mimetype: text/csv

en: Data plot of the field station (JUF)

en: Data plot of the forest station (JUB)

media_type: application/pdf

en: Data overview for air temperature, relative humidity, precipitation, PAR, wind speed.

format: PDF

mimetype: application/pdf

en: Site photo of the forest station (JUB)

en: Site photo of the forest station from the side.

en: Site photo of the field station (JUF)

en: Site photo of the field station from the side.

en: High quality meteorological data are needed for long-term forest ecosystem research, particularly in the light of global change. The long-term data series published here comprises almost 20 years of measurements for two meteorological stations in Jussy in Switzerland where one station is located within a natural broad-leaved forest stand (JUB) with sessile oak (_Quercus petrea_; 90 yrs), aspen (_Populus tremula_; 60 yrs) and European hornbeam (_Carpinus betulus_; 60 yrs) as dominant tree species. A second station is situated in the very vicinity outside of the forest (field station, JUF). The meteorological time series are presented in hourly time resolution of air temperature, relative humidity, precipitation, photosynthetically active radiation (PAR) and wind speed. Jussy is part of the Long-term Forest Ecosystem Research Programme (LWF) established and maintained by the Swiss Federal Research Institute WSL.

climate-change

display_name: climate-change

long-term

display_name: long-term

meteo

display_name: meteo

meteorology

display_name: meteorology

par

display_name: par

precipitation

display_name: precipitation

relative-humidity

display_name: relative-humidity

swiss-forest-lab

display_name: swiss-forest-lab

temperature

display_name: temperature

wind-speed

display_name: wind-speed

en: Jussy, Switzerland: Long-term forest meteorological data from the Long-term Forest Ecosystem Research Programme (LWF), from 1997 onwards


maintainer: Ionut Iosifescu Enescu

en: reproducibility open-source hpc jupyter-notebooks open-science research-data-management open-data

en: Open Science Support @ WSL (Poster)

en:
This poster was originally created for the swissuniversities Open Science Action Plan: Kick-Off Forum, and showed to the audience on 17.10.2019. It illustrates how the environmental data portal EnviDat provides the tools for fostering Open Science and Reproducibility of scientific research at WSL.

Supporting open science is a highly relevant user requirement for EnviDat and for implementing FAIR (Findability, Accessibility, Interoperability and Reusability) principles at dataset level.
EnviDat encourages WSL scientists to complement data publication with a complete description of research methods and the inclusion of the open source software, code or scripts used for processing the dataset or for obtaining the published results. By openly publishing open software (e.g. as Jupyter notebooks) alongside research data sets, researchers can contribute to mitigate reproducibility issues.

EnviDat also promotes and supports, where possible and practical, the publication of software as Jupyter notebooks. Jupyter notebooks provide a solution for improved documentation and interactive execution of open code in a wide range of programming languages (Python, R, Octave/Matlab, Java or Scala). These programming languages are widely used in environmental research at WSL and well supported by the Jupyter-compatible kernels. We have sucessfully interfaced EnviDat-hosted notebooks with the WSL High-Performance Computing (HPC) Linux Cluster through a JupyterHub/JuypterLab beta installation on the HPC cluster implemented in close collaboration with the WSL IT-Services.
For existing software that cannot be easily migrated to Jupyter Notebooks, the Open Science and Reproducibility is assisted by containerisation. We have proven that several Singularity containers can successfully run on WSL's HPC cluster.

Finally, the researchers can upload the data/results complemented by code (e.g. as Jupyter Notebooks, or Singularity containers) and any additional documentation in EnviDat. Consequently, they will receive a DOI for the entire dataset, which they can reference in their science paper in order to publish a more reproducible research.

_License_: This poster is released by WSL and the EnviDat team to the public domain under a Creative Commons 4.0 CC0 "No Rights Reserved" international license. You can reuse this poster in any way you want, for any purposes and without restrictions.

hpc

display_name: hpc

jupyter-notebooks

display_name: jupyter-notebooks

open-data

display_name: open-data

open-science

display_name: open-science

open-source

display_name: open-source

reproducibility

display_name: reproducibility

research-data-management

display_name: research-data-management

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Open Science Support at the Swiss Federal Research Institute WSL. The EnviDat Concept


maintainer: EnviDat Support

en: snow-mechanics snow microstructure x-ray-tomography compression-experiments

en: Snowmicroquakes Data

en: Compression experiments, X-ray images and simulation data with supplemented README file

en:
When snow is compressed with a certain speed, micro-snowquakes are triggered in the porous structure of bonded crystals. The present dataset covers uniaxial compression experiments of snow at different strain rates and concurrent X-ray tomography imaging documenting this feature.

The experiments were conducted in a micro-compression stage operated in the X-ray tomography scanner in the SLF cold laboratory. The dataset comprises the compression force data of 17 compression experiments, the 3D image data from 4 X-ray tomography scans and the results of numerical simulations.

compression-experiments

display_name: compression-experiments

microstructure

display_name: microstructure

snow

display_name: snow

snow-mechanics

display_name: snow-mechanics

x-ray-tomography

display_name: x-ray-tomography

en: Compressive stick slip and snow-micro-quakes


digitizing-historical-plague

maintainer: Christian Ginzler

title_for_slug: digitizing-historical-plague

en: palaeo-epidemiology plague-mapping plague-inventory yersinia-pestis historical-plague black-death bubonic-plague plague-outbreaks

en: We present newly digitized data on 6,929 plague outbreaks that occurred between 1347 and 1900 AD across Europe. The data base on an inventory initially published 1976. For georeferencing the information of Tele Atlas 2009 was used. The coordinates are in the reference systems ETRS89 and WGS84.

black-death

display_name: black-death

bubonic-plague

display_name: bubonic-plague

historical-plague

display_name: historical-plague

palaeo-epidemiology

display_name: palaeo-epidemiology

plague-inventory

display_name: plague-inventory

plague-mapping

display_name: plague-mapping

plague-outbreaks

display_name: plague-outbreaks

yersinia-pestis

display_name: yersinia-pestis

en: Digitizing historical plague


maintainer: Joan Casanelles Abella

en: plant-pollinator-interactions antwerp paris zurich tartu urban-ecology chelostoma-florisomne trap-nest osmia-cornuta poznan osmia-bicornis dna-metabarcoding hylaeus-communis cavity-nesting-bees

en: Information on the study sites

en: For each site, IDs, city, coordinates, structure where trapnest was attahced and height of the trapnest is provided

en: Explanation data variables

en: Larval food composition

en: Urbanization poses threats and opportunities for the biodiversity of wild bees. A main gap relates to the food preferences of wild bees in urban ecosystems, which usually harbour large numbers of plant species, particularly at the larval stage. This data sets describes the larval food of four wild bee species (i.e. Chelostoma florisomne, Hylaeus communis, Osmica bicornis and Osmia cornuta) and three genera (i.e. Chelostoma sp., Hylaeus sp, and Osmia sp.) common in urban areas in five different European cities (i.e. Antwerp, Paris, Poznan, Tartu and Zurich). This data results from a European-level study aimed at understanding the effects of urbanization on biodiversity across different cities and citiscapes, and a Swiss project aimed at understanding the effects of urban ecosystems in wild bee feeding behaviour. Wild bees were sampled using standardized trap-nests in 80 sites (32 in Zurich and 12 in each of the remaining cities), selected following a double gradient of available habitat at local and landscape scales. Larval pollen was obtained from the bee nests and identified using DNA metabarconding. The data provides the plant composition at the species or genus level of the different bee nests of the studied species in the studied sites of the five European cities. For Hylaeus communis, this is the first study in reporting larval food composition.

antwerp

display_name: antwerp

cavity-nesting-bees

display_name: cavity-nesting-bees

chelostoma-florisomne

display_name: chelostoma-florisomne

dna-metabarcoding

display_name: dna-metabarcoding

hylaeus-communis

display_name: hylaeus-communis

osmia-bicornis

display_name: osmia-bicornis

osmia-cornuta

display_name: osmia-cornuta

paris

display_name: paris

plant-pollinator-interactions

display_name: plant-pollinator-interactions

poznan

display_name: poznan

tartu

display_name: tartu

trap-nest

display_name: trap-nest

urban-ecology

display_name: urban-ecology

zurich

display_name: zurich

en: Larval food composition of four wild bee species in five European cities


en: wind precipitation radiation temperature-profiles atmospheric-conditions

en: DATA ACCESS

en: This data access is outdated and has been replaced with an updated version (see description).

en: Latest data from Stillberg climate station

en: This dataset is outdated and has been replaced with an updated version (see description).

en: Site photo 3

en: This site photo is outdated and has been replaced with an updated version (see description).

en: Overview plot

media_type: image/png

en: This overview plot is outdated and has been replaced with an updated version (see description).

format: PNG

en: Site photo 1

en: README

media_type: text/plain

en: This description is outdated and has been replaced with an updated version (see description).

format: TXT

en: STB2 CSV

en: Site photo 2

en:
 Important
This EnviDat entry is outdated. The most recent, usable version of the data can be found under the new EnviDat entry "Long-term meteorological station Stillberg, Davos, Switzerland at 2090 m a.s.l.." The entry can be found under this link <https://www.envidat.ch/#/metadata/meteo-stillberg> and with this DOI <https://doi.org/10.16904/envidat.396>.

atmospheric-conditions

display_name: atmospheric-conditions

precipitation

display_name: precipitation

radiation

display_name: radiation

temperature-profiles

display_name: temperature-profiles

wind

display_name: wind

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Long-term meteorological and snow station at 2090 m a.s.l., Stillberg, Davos, Switzerland (1975 - present)


maintainer: Anita C Risch

en: climate anthropogenic-management microbial-respiration nutrient-addition soil-properties microbial-biomass-carbon herbivore-exclusion

en: Risch et al. GEB_data.xlsx

en:
Study sites and experimental design
We collected data from 23 sites that are part of the Nutrient Network Global Research Cooperative (NutNet, https://nutnet.umn.edu/). The mean annual air temperature (MAT) across these sites ranged from -4 to 22°C, mean annual precipitation (MAP) from 252 to 1592 mm, and elevations from 6 to 4261 m above sea level (Fig 1a, Supplementary Table S1), hence cover a wide range of climatic conditions under which grasslands occur (Fig 1b). Soil organic C concentrations ranged between 0.8 to 7.8%, soil total N concentrations between 0.1 and 0.6%, and the soil C:N ratio between 9.1 and 21.5. Soil clay content spanned from 3.0 to 35%, and soil pH from 3.4 to 7.6 (Supplementary Table S2).
At each site, the effects of nutrient addition and herbivore exclusion were tested via a randomized-block design (Borer et al., 2014). Three blocks with 10 treatment plots each were established at each site, except for the site at bldr.us (only two blocks). Each of these 10 plots was randomly assigned to a nutrient or fencing treatment. An individual plot was 5 x 5 m, divided into four 2.5 x 2.5 m subplots. Each subplot was further divided into four 1 x 1 m square sampling plots, one of which was set aside for soil sampling (Borer et al., 2014). Plots were separated by at least 1 m wide walkways. We collected soil samples from four different treatments for this study: (i) untreated control plots (Control), (ii) herbivore exclusion plots (Fence), (iii) plots fertilized with N, P, K, plus nine essential macro and micronutrients (NPK), and (iv) plots with simultaneous fertilizer addition and herbivore exclusion (NPK+Fence). The experiments were established at different times in the past, with years of treatment different among sites (2 – 9 years since start of treatment; Supplementary Table S1). For the nutrient additions, all sites applied 10 g N m-2 each year as time-release urea; 10 g P m-2 yr-1 as triple-super phosphate; 10 g K m-2 yr-1 as potassium sulfate. A micro-nutrient mix (Fe, S, Mg, Mn, Cu, Zn, B, Mo, Ca) was applied at 100 g m-2 together with K in the first year of treatments but not thereafter.
We excluded large vertebrate herbivores (Fence) by fencing two plots, one with and one without NPK additions, within each block. The fences excluded all aboveground mammalian herbivores with a body mass of over 50 g (Borer et al., 2014). At most sites, the fences were 180 cm high, and the fence contained a wire mesh (1 cm holes) for the bottom 90 cm with a 30 cm outward-facing flange stapled to the ground to exclude burrowing animals. Climbing and subterranean animals may potentially still access these plots (Borer et al., 2014). For slight modifications in fence design at a few sites see Supplementary Table S3. Most sites only had wild herbivores, although four sites were also grazed by domestic animals (Supplementary Table S1).

Collection of soil samples, soil microbial respiration, microbial biomass, and other soil properties
Each of the 23 sites received a package containing identical material from the Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Switzerland to be used for sampling (Risch et al., 2015; Risch et al., 2019). We collected two soil cores of 5 cm diameter and 12 cm depth in each sampling plot and composited them to measure MR, MBC, and soil chemical properties (see below). An additional sample (5 x 12 cm) was collected to assess soil physical properties. This sample remained within a steel sampling core after collection and both ends were tightly closed with plastic caps to avoid disturbance. All soils were shipped cooled to the laboratory at (Location will be disclosed after manuscript acceptance) within a few days after collection. Soils were sampled roughly 6 weeks prior to peak biomass at each site during 2015 and 2016.
To assess MR (CO2 production) in a laboratory incubation experiment we weighed duplicate soil samples (8 g dry soil equivalent) into 50-ml Falcon tubes. No additional substrate (glucose, sugar) was added to these samples. We adjusted the soil moisture of each sample to 60% field capacity. We then placed a 15 ml plastic test tube (Semadeni 1701A) containing 7.25 ml 0.05 M NaOH over each soil sample. The test tube was fixed with a plastic rod so that it was not in contact with the soil sample. The Falcon tubes were then sealed with a screw cap and placed in an incubator under completely dark conditions at 20°C. The CO2 produced by microbial respiration was absorbed by the 0.05 M NaOH. For five weeks we measured the decrease in conductivity within the 0.05 M NaOH solution on a weekly basis with a Multimeter WTW Multi 3410 (WTW GmbH, Germany) and replaced the 0.05 M NaOH with fresh solution. We included Falcon tubes without soil samples in each incubation run as blanks to test if tubes were tight and no CO2 could enter or escape. We calibrated the relationship between conductivity reduction and NaOH absorbed as follows: 400 ml 0.05 M NaOH was placed in a beaker and its conductivity was measured with the multimeter. While stirring, air containing CO2 was blown into the solution for approximately one minute, which reacts with NaOH to form Na2CO3. After this process, conductivity was measured again. We then transferred 7.25 ml of the solution into a smaller beaker and added 1 ml of 0.1 M BaCl2 to precipitate Na2CO3 and then titrated the solution with 0.05 M HCl to determine the remaining NaOH. We then repeated these steps with the remaining solution a total of nine times and plotted the conductivities (y-axis) against the NaOH consumed (x-axis, Supplementary Fig S1). This regression line was used to infer the consumption of NaOH from the conductivity reduction in the incubation experiments and to calculate CO2 evolution during incubation. In addition, we determined the optimum concentration for the NaOH solution in series of preliminary experiments, so that the concentration was not too high to become insensitive, but also not too low so that not all NaOH reacts during incubation. We then calculated MR (mg CO2-C kg dry soil-1 h-1) as total amount of CO2 released over the 5 weeks divided by the duration of the entire incubation in hrs.
Soil microbial biomass carbon (MBC; mg C kg soil-1 ) was measured at the beginning of the experiment by measuring the maximal respiratory response to the addition of glucose solution (4 mg glucose per g soil dry weight dissolved in distilled water; substrate-induced respiration method) on approximately 5.5 g of soil (J. P. E. Anderson & Domsch, 1978; Nico Eisenhauer et al., 2018; Scheu, 1992). For this purpose we used an O2-micro-compensation apparatus (Scheu, 1992). More specifically, substrate-induced respiration was calculated from the respiratory response to D-glucose for 10 hr at 20°C. Glucose was added according to preliminary studies to saturate the catabolic enzymes of microorganisms (4 mg g soil-1 dissolved in 400 ml deionized water). The mean of the lowest three readings within the first 10 hrs (between the initial peak caused by disturbing the soil and the peak caused by microbial growth) was taken as maximum initial respiratory response (MIRR; ml O2 kg soil-1 h-1) and microbial biomass (mg C kg soil-1) was calculated as 38 x MIRR (Beck et al., 1997; Cesarz et al., 2022; Thakur et al., 2015).
The rest of the composited sample was dried at 65°C for 48 h, ground and sieved (2 mm mesh) to assess the soil pH, mineral soil total C and N and C:N ratio, and mineral soil organic C (Risch et al., 2019). The undisturbed sample was used to assess water holding capacity (WHC), bulk density (BD), and soil texture [sand, silt, clay; methods in (Risch et al., 2019)]. We used the percentage of sand and clay as an indicator of soil texture in this study. MAT (°C), MAP (mm) and temperature of the wettest quarter (°C) were obtained from www.worldclim.com (Fick & Hijmans, 2017; Hijmans, Cameron, Parra, Jones, & Jarvis, 2005). These variables were selected as they were found to be drivers of soil nutrient processes across these sites in earlier studies (Risch et al., 2020; Risch et al., 2019). Mean annual soil temperatures (MAST; °C) for the 0 to 5 cm soil layer were obtained for each site from the SoilTemp maps (J. Lembrechts et al., 2021; J. J. Lembrechts et al., 2022), global gridded modelled products of soil bioclimatic variables for the 1979-2013 period at a 1-km² resolution, based on CHELSA, ERA5 and in-situ soil temperature measurements.
Numerical calculations and statistical analyses
We calculated MMQ as MR/MBC. We corrected this measure using the average soil temperature of each site (MMQsoil). This temperature correction is necessary as incubation temperatures are usually much higher than site mean annual soil temperatures (see Xu et al. 2017). MMQsoil = MMQ x Q10(MAST – 20)/10, where Q10 was assumed to be 2 (Xu et al. 2017). See Supplementary Fig S2 for comparison of air and soil temperatures across the 23 sites as well as the incubation temperature.
Some of the explanatory variables (clay, soil organic C, C:N ratio) were skewed and were thus log-transformed prior to analyses. All continuous explanatory variables were centred and scaled to have a mean of zero and variance of one. To avoid collinearity between them we filtered them using correlation analysis (Supplementary Fig S3). From the variables that were strongly correlated (Pearson’s |r| > 0.70) (Dormann et al., 2013), we selected the ones that allowed us to minimize the number of variables (Supplementary Fig S3). Specifically, soil total N concentration, soil total C concentration, soil sand content and soil bulk density were dropped from the dataset. We then assessed how these edaphoclimatic variables are related to MMQ across our global grasslands.
For this, we used linear mixed effects models (LMMs) fitted by maximum likelihood with the lme function in the nlme package (version 3.1-153) (Pinheiro, Bates, DebRoy, & Sarkar, 2021) in R version 3.6.3. (R Core Team, 2019). We used treatment as a fixed effect and plot nested in site as random effects to assess treatment differences in MMQsoil, as well as MR, and MBC. The number of years since the treatment started was included as a fixed effect in all the initial models but was not significant and therefore not retained in the models. To assess how differences in MMQsoil were affected by environmental factors (soil, climatic properties) we again used LMMs. Soil and climatic properties were included as fixed effects and plot nested in site as random effects. We did not include interactions between environmental variables. We then used the MuMin package (Barton, 2018) (version 1.42.1) to select the best models that explained the most variation based on Akaike’s information criterion (AIC; model.avg function). We used the corrected AIC (AICc) to account for our small sample size and selected the top models that fell within 4 AICc units (delta AICc < 4) (Burnham & Anderson, 2002; Johnson & Omland, 2004). We present all our top models rather than model averages. Conditional averages are provided in the Supplementary material.
Based on findings from analyses described above and the literature, we developed a conceptual model of direct and indirect relationships between both edaphoclimatic variables and experimental treatments (Supplement Figure S4) to obtain a more holistic approach in understanding how these properties affect MMQsoil. We had data from 23 sites with 272 observations. We tested this model using structural equation modelling based on a d-sep approach (Lefcheck, 2016; Shipley, 2009). We considered those environmental drivers that were included in our top LMMs, namely temperature of the wettest quarter (T.q.wet), soil pH, water holding capacity (WHC) and soil organic C (organic C; Supplementary Figure S4). These factors were allowed to directly affect MMQsoil, and via their interactions with treatments. In addition, treatments were allowed to directly affect MMQsoil. Treatments were included as dummy variables in the model. We tested our conceptual model (Supplementary Fig S4) using the piecewiseSEM package (version 2.0.2; Lefcheck, 2016) in R 3.4.0, in which a structured set of linear models are fitted individually. This approach allowed us to account for the nested experimental design, and overcome some of the limitations of standard structural equation models, such as small sample sizes (Lefcheck, 2016; Shipley, 2009). We used the lme function of the nlme package to model response variables, including site as a random factor. Good fit of the SEM was assumed when Fisher’s C values were non-significant (p > 0.05). For all significant interactions between soil or climate variables and treatments detected in the SEMs, we calculated treatment effect sizes, i.e., the differences in MMQsoil between Control and treatments as log response ratios (LRR) and plotted these values against the climate or soil factors. The LRR were defined as log(Control/Treatment), where treatment was either Fence, NPK or NPK+Fence. To assess which of the LRR-climate or soil property relationships were significant we again used LMMs, in which soil and climatic properties were included as fixed effects and plot nested in site as random effects.

en:
This dataset contains all data on which the following publication below is based.

Paper Citation:

Risch Anita C., Zimmermann, Stefan, Schütz, Martin, Borer, Elizabeth T., Broadbent, Arthur A.D., Caldeira, Maria C., Davies, Kendi F., Eisenhauer, Nico, Eskelinen, Anu, Fay, Philip A., Hagedorn, Frank, Knops, Johannes M.H., Lembrechts, Jonas, J., MacDougall, Andrew S., McCulley, Rebecca L., Melbourne, Brett A., Moore, Joslin L., Power, Sally A., Seabloom, Eric W., Silveira, Maria L., Virtanen, Risto, Yahdjian, Laura, Ochoa-Hueso, Raul (accepted). Drivers of the microbial metabolic quotient across global grasslands. Global Ecology and Biogeography

Please cite this paper together with the citation for the datafile.

The microbial metabolic quotient (MMQ; mg CO2-C mg MBC-1 h-1), defined as the amount of microbial CO2 respired (MR; mg CO2-C kg soil-1 h-1) per unit of microbial biomass C (MBC; mg C kg soil-1), is a key parameter for understanding the microbial regulation of the carbon (C) cycle, including soil C sequestration. Here, we experimentally tested hypotheses about the individual and interactive effects of multiple nutrient addition (NPK+micronutrients) and herbivore exclusion on MR, MBC, and MMQ across 23 sites (5 continents). Our sites encompassed a wide range of edaphoclimatic conditions, thus we assessed which edaphoclimatic variables affected MMQ the most and how they interacted with our treatments. Soils were collected in plots with established experimental treatments. MR was assessed in a five-week laboratory incubation without glucose addition, MBC via substrate-induced respiration. MMQ was calculated as MR/MBC and corrected for soil temperatures (MMQsoil). Using LMMs and SEMs, we analysed how edaphoclimatic characteristics and treatments interactively affected MMQsoil. MMQsoil was higher in locations with higher mean annual temperature, lower water holding capacity, and soil organic C concentration, but did not respond to our treatments across sites as neither MR nor MBC changed. We attributed this relative homeostasis to our treatments to the modulating influence of edaphoclimatic variables. For example, herbivore exclusion, regardless of fertilization, led to greater MMQsoil only at sites with lower soil organic C (<1.7%). Our results pinpoint the main variables related to MMQsoil across grasslands and emphasize the importance of the local edaphoclimatic conditions in controlling the response of the C cycle to anthropogenic stressors. By testing hypotheses about MMQsoil across global edaphoclimatic gradients, this work also helps to align the conflicting results of prior studies.

anthropogenic-management

display_name: anthropogenic-management

climate

display_name: climate

herbivore-exclusion

display_name: herbivore-exclusion

microbial-biomass-carbon

display_name: microbial-biomass-carbon

microbial-respiration

display_name: microbial-respiration

nutrient-addition

display_name: nutrient-addition

soil-properties

display_name: soil-properties


en: total-number cloud-droplets pmcamx-uf nucleation modeling

en: data_JRL_New particle formation events can reduce cloud droplets in boundary layer clouds at the continental scale.Paper_2023GL106182.zip

en: This repository contains PMCMx-UF model outputs used for the paper: D. Patoulias K. Florou S. N. Pandis and A. Nenes: New particle formation events can reduce cloud droplets in boundary layer clouds at the continental scale, Geophysical Research Letters, in review, 2023.

cloud-droplets

display_name: cloud-droplets

modeling

display_name: modeling

nucleation

display_name: nucleation

pmcamx-uf

display_name: pmcamx-uf

total-number

display_name: total-number

en: Dataset for the publication New particle formation events can reduce cloud droplets in boundary layer clouds at the continental scale


en: insects stepping-stones steigerwald body-size forest old-growth-islands trems germany european-beech water-filled-tree-holes invertebrates diversity metacommunity dendrotelms fagus-sylvatica

en: Dataset with environmental data

format: XLS

en: Dataset on body-length measures of all sampled individuals

en: Dataset on sampled invertebrate communities

en: This dataset comprises environmental and insect larval data from 24 artificial dendrotelms (water-filled tree holes) created in beech trees (Fagus sylvatica) in six old-growth forest patches connecting two forest nature reserves in the Steigerwald in Germany.

body-size

display_name: body-size

dendrotelms

display_name: dendrotelms

diversity

display_name: diversity

european-beech

display_name: european-beech

fagus-sylvatica

display_name: fagus-sylvatica

forest

display_name: forest

germany

display_name: germany

insects

display_name: insects

invertebrates

display_name: invertebrates

metacommunity

display_name: metacommunity

old-growth-islands

display_name: old-growth-islands

steigerwald

display_name: steigerwald

stepping-stones

display_name: stepping-stones

trems

display_name: trems

water-filled-tree-holes

display_name: water-filled-tree-holes


en: electrical-conductivity groundwater topsoil-interflow studibach overland-flow plot stable-isotopes soil-water rainfall alptal

en:
This dataset contains stable isotope ratios of oxygen and hydrogen (O-18 and H-2) and electrical conductivity (EC) in overland flow (OF), topsoil interflow (TIF), soil water, groundwater, and rainwater for 12 rainfall events during the snow-free seasons of 2021 and 2022 in the Studibach catchment, Alptal, Switzerland.

Overland flow, topsoil interflow (i.e., lateral flow from the more densely rooted soil layer), soil water, and groundwater were collected at 14 small trenched runoff plots (1 x 3 m) in three subcatchments (C2, C3, C5) of the Studibach catchment. Overland flow was collected from the surface up to 2-5 cm depth and thus includes biomat flow. A trench was used to collect topsoil interflow (up to 60 cm below the surface; see Table 1 in the manuscript for details). Rainwater was collected at two locations in the Studibach catchment (in C3 and C5, respectively). Soil water was collected in between the events from suction lysimeters installed at 12.5 cm and 20 cm below the soil surface in the middle of each plot. Groundwater was collected between events from wells installed near the plots up to the soil-bedrock interface.
The water samples were analysed for the stable isotopes of oxygen and hydrogen (O-18 and H-2) using with a cavity ring-down spectroscope (CRDS; L2140-i or L2130-i, Picarro, Inc., USA) at the Chair of Hydrology at the University of Freiburg, Germany. The isotope ratios are reported in per mil (‰) relative to Vienna Standard Mean Ocean Water.

A more detailed description of the field setup, data collection and preparation can be found in Leuteritz et al. (in press).

The dataset contains in addition to the sample identifier and the site and event identifiers that are used in the publication, also the sample collection date (typically one day after the event) and the coordinates for each plot (coordinate system: WGS84). For the plots for which samples were collected with an automatic sampler (ISCO), the date and time (UTC) of sample collection are given as well.

alptal

display_name: alptal

electrical-conductivity

display_name: electrical-conductivity

groundwater

display_name: groundwater

overland-flow

display_name: overland-flow

plot

display_name: plot

rainfall

display_name: rainfall

soil-water

display_name: soil-water

stable-isotopes

display_name: stable-isotopes

studibach

display_name: studibach

topsoil-interflow

display_name: topsoil-interflow

educ

en: Education, culture and sport

en: Stable water isotopes and EC in overland flow, topsoil interflow, soil water, groundwater, and rainwater for 12 rainfall events in the Studibach catchment, Alptal, Switzerland


maintainer: Avalanche Warning Service SLF

en: Avalanche fatalities per year in Switzerland since 1936/1937

en:
Attention: this data is not updated after 2022 anymore.
This dataset contains the statistics on the number of avalanche fatalities per hydrological year in Switzerland. The data set commences with the beginning of the hydrological year 1936/37 on 01/10/1936. After the completion of a hydrological year, the new data is appended to the existing dataset.
The following information is contained (by column and column title):
 - hydrological year
 - number of fatalities in the backcountry (=tour)
 - number of fatalities in terrain close to ski areas (=offpiste)
 - number of fatalities on transportation corridors including ski runs, roads, railway lines (=transportation.corridors)
 - number of fatalities in or around buildings or in settlements (= buildings)
 - sum (of all four categories)
The definition for these four categories as described in the guidelines to the avalanche accident database:
**tour**:
activities include back-country ski, snowboard or snow-shoe touring
**offpiste**:
access from ski area, generally from the top of a skilift with short hiking distances
**transportation.corridors** ([Techel et al., 2016](http://www.geogr-helv.net/71/147/2016/ )):
people travelling or recreating on open or temporarily closed
transportation corridors (e.g. a road user or a skier on a ski run) and people working on open or closed transportation corridors (e.g. maintenance crews on roads, professional rescue teams)
**buildings** ([Techel et al., 2016](http://www.geogr-helv.net/71/147/2016/ )):
people inside or just outside buildings, and workers on high alpine building
sites

avalanche-accident-statistics

display_name: avalanche-accident-statistics

avalanche-accidents

display_name: avalanche-accidents

avalanche-fatalities

display_name: avalanche-fatalities

fatalities-in-or-around-buildings

display_name: fatalities-in-or-around-buildings

fatalities-in-settlements

display_name: fatalities-in-settlements

fatalities-in-the-backcountry

display_name: fatalities-in-the-backcountry

fatalities-on-transportation-corridors

display_name: fatalities-on-transportation-corridors

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Number of avalanche fatalities per hydrological year in Switzerland since 1936-1937


maintainer: Manuel R. Popp

en: vascular-plants species-observations testing plant-species photo

en:
Zipped directory containing approximately 5'600 photographs of vascular plants from the Swiss flora, taken at 153 sampling locations. Sampling locations were assigned a TypoCH habitat type.
Folder structure:
 - Each folder represents a plant population, defined by the same species, sampling date, and location.
 - Higher-level directories organize populations observed within the same sampling plot.
Naming convention:
Each image is names img_<index>_<plant organ>.jpg whereby <index> is the number of the photograph within the folder. For each observed population, images have consecutive integers as index. <plant organ> is a single letter indicating the depicted part(s) of the plant:
b = bark
i = inflorescense
f = infructescense
s = several parts
v = vegetative parts

en:
This data set contains roughly 5600 photographs of plants and plant parts from 153 sites recorded in all major biogeographic regions of Switzerland using smartphone cameras. Image names contain a letter referring to depicted plant parts: b = bark, i = inflorescence, f = infructescense, s = several parts, v = vegetative parts.
Photos are grouped in folders by observation (individual or population), i.e., photos in the same folder are of the same species, observed at the same time and sampling plot. At a higher organisational level, these folders are grouped by sampling plot (usually 3×3 m in open areas and 10×10 m in forests). The main folder contains metadata including taxon name, sampling time and location, as well as the TypoCH habitat type encoded as integers.
This data set accompanies the following publication:
Popp, M. R., Zimmermann, N. E. & Brun, P. Evaluating the use of automated plant identification tools in biodiversity monitoring—a case study in Switzerland. _Ecological Informatics_ **103316** (2025) doi:[10.1016/j.ecoinf.2025.103316](https://doi.org/10.1016/j.ecoinf.2025.103316).

photo

display_name: photo

plant-species

display_name: plant-species

species-observations

display_name: species-observations

testing

display_name: testing

vascular-plants

display_name: vascular-plants

en: Photos of vegetative and reproductive parts of 560 vascular plant species taken in all biogeographic regions of Switzerland


en: natural-climate-variability rain-on-snow snow-water-equivalent climate-change-impact uncertainty cryosphere

en: climate realizations

en: The dataset contains for three variables (snow water equivalent, surface water input and liquid precipitation) 50 realizations of current and future climate periods for two time horizons (mid end end of century), two emission senarions (RCP 4.5 and 8.5) and 10 climate model chains (all EUR11 chains within CH2018). To quantify natural climate variability for projections of snow conditions and resulting rain-on-snow (ROS) flood events, a weather generator was applied to simulate inherently consistent climate variables for multiple realizations of current and future climates at 100 m spatial and hourly temporal resolution over a 12 x 12 km high-altitude study area in the Swiss Alps. The output of the weather generator was used as input for subsequent simulations with an energy balance snow model. The data was extracted in 2021 from original model output.

climate-change-impact

display_name: climate-change-impact

cryosphere

display_name: cryosphere

natural-climate-variability

display_name: natural-climate-variability

rain-on-snow

display_name: rain-on-snow

snow-water-equivalent

display_name: snow-water-equivalent

uncertainty

display_name: uncertainty

en: Multiple realizations of daily snow water equivalent, surface water input and liquid precipitation projections for mid- and late-century


en: precipitation sdms frost-change-velocity ground-temperature aridity soil

en: Mean annual temperature modified from CHELSA

media_type: image/tiff

en: Soil organic carbon content modified from SoilGrids

format: TIFF

en: Precipitation seasonality from CHELSA

en: Frost change frequency modified from CHELSA

en: Mean diurnal range modified from CHELSA

en: Soil clay content modified from SoilGrids

en: Soil pH modified from SoilGrids

en: Precipitation of driest quarter modified from CHELSA

en: The dataset contains seven environmental layers (average annual temperature, aridity [annual precipitation divided by annual potential evapotranspiration], frost change frequency, precipitation in the driest quarter, mean diurnal temperature range, and precipitation seasonality) modified from CHELSA (https://chelsa-climate.org/) and three soil layers (soil organic matter content, pH water, and clay content) modified from SoilGrids (https://soilgrids.org/).

aridity

display_name: aridity

frost-change-velocity

display_name: frost-change-velocity

ground-temperature

display_name: ground-temperature

precipitation

display_name: precipitation

sdms

display_name: sdms

soil

display_name: soil

en: Environmental layers for SDM simulations (GDPlants)


en: chondrichthyes actinopterygii edna teleo metabarcoding fish-composition bayofbiscay atlantic-region

en: Data access

en:
Environmental DNA complements scientific trawling in surveys of marine fish biodiversity (Dataset 2019)
In October 2019 we chose 15 sites from the 2019 EVHOE survey for eDNA sampling. The French international EVHOE bottom trawl survey is carried out annually during autumn in the BoB to monitor demersal fish resources. At each site, we sampled seawater using Niskin bottles deployed with a circular rosette. There were nine bottles on the rosette, each of them able to hold ∼5 l of water. At each site, we first cleaned the circular rosette and bottles with freshwater, then lowered the rosette (with bottles open) to 5 m above the sea bottom, and finally closed the bottles remotely from the boat. The 45 l of sampled water was transferred to four disposable and sterilized plastic bags of 11.25 l each to perform the filtration on-board in a laboratory dedicated to the processing of eDNA samples. To speed up the filtration process, we used two identical filtration devices, each composed of an Athena® peristaltic pump (Proactive Environmental Products LLC, Bradenton, Florida, USA; nominal flow of 1.0 l min–1 ), a VigiDNA 0.20 μm filtration capsule (SPYGEN, le Bourget du Lac, France), and disposable sterile tubing. Each filtration device filtered the water contained in two plastic bags (22.5 l), which represent two replicates per sampling site. We followed a rigorous protocol to avoid contamination during fieldwork, using disposable gloves and single-use filtration equipment and plastic bags to process each water sample. At the end of each filtration, we emptied the water inside the capsule that we replaced by 80 ml of CL1 conservation buffer and stored the samples at room temperature following the specifications of the manufacturer (SPYGEN, Le Bourget du Lac, France). We processed the eDNA capsules at SPYGEN, following the protocol proposed by Polanco-Fernández et al., (2020). We performed library preparation and sequencing at Fasteris (Geneva, Switzerland). Specifically, we prepared four libraries using the MetaFast protocol (a ligation-based method) and sequenced them separately. We carried out paired-end sequencing using a MiSeq sequencer (2 × 125 bp, Illumina, San Diego, CA, USA) on two MiSeq Flow Cell Kits (v3; Illumina), following the manufacturer’s instructions. We analysed the sequence reads using the OBITools package (http://metabarcoding.org/obitools; Boyer et al., 2016), following the protocol described by Valentini et al. (2016).
Data content:
	* rawdata/: contains the raw reads for each individual sample. One archive contains the paired-end reads specified by the _R1 or _R2 suffix as well as individually tagged PCR replicates (if available) together with an archive containing all extraction and PCR blank samples of the library. Reads have been demultiplexed using cutadapt but not trimmed, individual demultiplexing tags and primers remain present in the sequences.
	* taxadata/: contains the table with all detected taxonomy for each sample after bioinformatic processing (see Polanco et al. 2020 for details; https://doi.org/10.1002/edn3.140) and associated field metadata.
	* metadata/: contains two metadata files, one related to the data collected in the field for each filter, and the second related to the sequencing process in the lab (including the tag sequence, library name, and marker information for each sample)

actinopterygii

display_name: actinopterygii

atlantic-region

display_name: atlantic-region

bayofbiscay

display_name: bayofbiscay

chondrichthyes

display_name: chondrichthyes

edna

display_name: edna

fish-composition

display_name: fish-composition

metabarcoding

display_name: metabarcoding

teleo

display_name: teleo

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Environmental DNA Marine France Evhoe 2019


soil-respiration-exclosure-experiment

title_for_slug: soil-respiration-exclosure-experiment

en: ungulates soil-respiration grassland subalpine grazing

en: Soil respiration Switzerland

en:
ID: Fence number

Year	:Year of sampling

mean.CO2: soil respiration measured with PP-systems SRC-1 soil respriation chamber attached to a EGM-4 infrared gas analyser; units CO2 g m-2 h-1

Grassland: Grasslands where fences were errected. Note that on large grasslands (STAB, GRIM, MING) 2 pairs of fences were errected (2 in short, 2 in tall-grass vegetation), on small grasslands (DADA, MARG, BOTS) only one pair of fences was errected (1 short-grass; one-tallgrass vegetation)

Fence: Fence number; un-even numbers on short-grass vegetation (1,3,5,7,9,11,13,15,17), even numbers on tall-grass vegetation (2,4,6,8,10,12,14,16,18)

Vegetation:	1 = shortgrass vegetation, 2 = tall-grass vegetation (9 replicate fences on each vegetation type)

Treatment	: 1 = all herbivores grazing, 2 = large ungulates (red deer, chamois) excluded

en:
Location of data collection
The Swiss National Park (SNP) is located in the southeastern part of Switzerland, and covers an area of 170 km2, 50 km2 of which is forested, 33 km2 is occupied by alpine and 3 km2 by subalpine grasslands. Elevations range from 1350 to 3170 m a.s.l., and mean annual precipitation and temperature are 871 mm and 0.6°C measured at the Park’s weather station in Buffalora (1980 m a.s.l.) between 1960 and 2009 (MeteoSchweiz 2011). Founded in 1914, the SNP received minimal human disturbance for almost 100 years (no hunting, fishing, or camping, visitors are not allowed to leave the trails). Large (> 1 ha) homogeneous patches of short- and tall-grass vegetation characterize the subalpine grasslands. The average vegetation height of short-grass vegetation is 2 to 5 cm. Red fescue (Festuca rubra L.), quaking grass (Briza media L.) and common bent grass (Agrostis tenuis Sipthrob) are the predominating plant species in this vegetation type. Tussocks of evergreen sedge (Carex sempervirens Vill.) and mat grass (Nardus stricta L.) are predominant in the tall-grass vegetation, which averages 20 cm in vegetation height (Schütz and others 2006). Short-grass vegetation developed in areas where cattle and sheep rested (high nutrient input) during agricultural land-use (from 14th century until 1914); tall-grass vegetation developed in areas where cattle and sheep used to graze, but did not rest (Schütz and others 2003, 2006). Herbivores were shown to consume > 60% of the biomass in short-grass compared to < 20% in tall-grass vegetation (Schütz and others 2006). The herbivore community present in the SNP can be divided into four groups based on body size/weight: large [red deer (Cervus elaphus L.) and chamois (Rupricapra rupricapra L.); 30 - 150 kg], medium [marmot (Marmota marmota L.) and snow hare (Lepus timidus L.); 3 – 6 kg], and small vertebrate herbivores (small rodents: e.g. Clethrionomys spp., Microtus spp., Apodemus spp.; 30 – 100 g) as well as invertebrates (e.g. grasshoppers, caterpillars, cicadas, < 5 g).

Experimental design
We selected 18 subalpine grassland sites (9 short-grass, 9 tall-grass vegetation). The sites were spread across the entire park on dolomite parent material at altitudes of 1975 to 2300 meters. At each site we established an exclosure network (fences) in spring 2009 (early June), immediately after snowmelt. Each exclosure network consisted of a total of five 2 × 3 m sized plots that progressively excluded the different herbivores listed above (further labeled according to the herbivore guilds that had access to the respective plots “All”, “Marmot/Mice/Invertebrates”, “Mice/Invertebrates”, “Invertebrates”, “None”). The “All” treatment was thus accessible to all herbivores, was not fenced and was located at least 5 m away from a 2.1 m tall and 7 × 9 m main fence that enclosed the other four treatments. This fence was constructed of 10 × 10 cm wooden posts and electrical equestrian tape (AGRARO ECO, Landi, Bern, Switzerland; 20 mm width) mounted at 0.7 m, 0.95 m, 1.2 m, 1.5 m and 2.1 m above the ground that were connected to a solar charged battery (AGRARO Sunpower S250, Landi, Bern, Switzerland). We also mounted non-electrically charged equestrian tape at 0.5 m to help exclude deer and chamois, yet allow marmots and hares to enter safely. Within each main fenced area we randomly established four 2 × 3 m plots: (1) The “Marmot/Mice/Invertebrates” plot remained unfenced, thus, with the exception of red deer and chamois, all herbivores were able to access the plot, (2) The “Mice/Invertebrates” plot consisted of a 90 cm high electric sheep fence (AGRARO Weidezaunnetz ECO, Landi, Bern, Switzerland; mesh size 10 × 10 cm) connected to the solar panel and excluded all medium sized mammals (marmots, hares), but provided access for small mammals and invertebrates, (3) The “Invertebrates” plot provided access for invertebrates only and was surrounded by 1 m high metal mesh (Hortima AG, Hausen, Schweiz; mesh size 2 × 2 cm), (4) The “None” plot was surrounded by a 1 m tall mosquito net (Sala Ferramenta AG, Biasca, Switzerland; mesh size 1.5 × 2 mm) to exclude all herbivores. This plot was covered with a roof constructed of a wooden frame lined with mosquito mesh that was mounted on the wooden corner posts. We also treated this plot with a biocompatible insecticide (Clean kill original, Eco Belle GmbH, Waldshut-Tiengen, Germany) when needed to remove insects that might have entered during data collection or that hatched from the soil.

!!! The here published data set only contains data for “All”, and “Marmot/Mice/Invertebrates” (= ungulates excluded) plots !!!

Data collection
In-situ soil CO2 emissions were measured with a PP-Systems SRC-1 soil respiration chamber (closed circuit) attached to a PP-Systems EGM-4 infrared gas analyzer (PP-Systems, Amesbury, MA, USA) on two randomly selected locations on one subplot within each of the 90 plots. For each measurement the soil chamber (15 cm high; 10 cm diameter) was placed on a permanently installed PVC collar (10 cm diameter) driven five centimeters into the soil at the beginning of the study (June 2009). The measurements were conducted between 0900 and 1700 hours every two weeks from early to early September 2009, 2010, 2011 and 2013. Freshly germinated plants growing within the PVC collars were removed prior to each measurement to avoid measuring plant respiration/photosynthesis. The two measurements collected per plot every two weeks were averaged.

Please acknowledge the funding of the study: funded by the Swiss National Science Foundation, SNF grant-no 31003A_122009/1 to Anita C. Risch, Martin Schütz and Flurin Filli

grassland

display_name: grassland

grazing

display_name: grazing

soil-respiration

display_name: soil-respiration

subalpine

display_name: subalpine

ungulates

display_name: ungulates

en: Soil respiration - exclosure experiment


en: first-order-catchment runoff meteorological-data snow alptal subalpine

en: Daily meteorological and snow data (1968-2022) Alptal

en:
Air temperature, dew point temperature, relative humidity, wind speed, precipitation and global radiation have been measured (since 1981) on a meadow (Erlenhöhe) in the Erlenbach catchment. It is located at 1'220 m a.s.l. with an exposure towards west. In order to assess the spatial variability of precipiation, two additional rain gauges have been running in the Vogelbach and Lümpenenbach catchment, respectively.
For the period before 1981, meteorological variables have been extrapolated from the nearby MeteoSwiss station Einsiedeln (ca. 15 km north) to the WSL station Erlenhöhe using a linear correction factor for air temperature, wind speed and precipitation.
Snow depth has been recorded automatically since 2003. Snow water equivalent has been calculated using two numerical models: COUP model (Jansson, 2012) and DeltaSnow model (Winkler et al., 2021)

Jansson, P.-E. (2012). COUP model: model use, calibration, and validation.Transactions of the ASABE, 55(4), 1335–1344.
Winkler, M., et al. (2021): Snow water equivalents exclusively from snow depths and their temporal changes: the Δsnow model, Hydrol. Earth Syst. Sci., 25, 1165-1187, 10.5194/hess-25-1165-861 2021.

en: Daily runoff data from three steep torrents in the Alptal (1968-2022)

en: Runoff, water temperature and electrical conductivity have been measured since 1968 at the outlet of three torrential catchments (with an area of approximately 1 km2 each) located in the Alptal valley: Erlenbach, Lümpenenbach and Vogelbach. This data set provides daily mean values; data at 10-min resolution can be provided on request for the period 1984-2022 (contact: alptal@wsl.ch).

en: Meteorological data Alptal 1968-2024 EnviDat updated

en:
Air temperature, dew point temperature, relative humidity, wind speed, precipitation and global radiation have been measured (since 1981) on a meadow (Erlenhöhe) in the Erlenbach catchment. It is located at 1'220 m a.s.l. with an exposure towards west. In order to assess the spatial variability of precipitation, two additional rain gauges have been running in the Vogelbach and Lümpenenbach catchment, respectively. For the period before 1981, meteorological variables have been extrapolated from the nearby MeteoSwiss station Einsiedeln (ca. 15 km north) to the WSL station Erlenhöhe using a linear correction factor for air temperature, wind speed and precipitation. Snow depth has been recorded automatically since 2003. Snow water equivalent has been calculated using two numerical models: COUP model (Jansson, 2012) and DeltaSnow model (Winkler et al., 2021)
Jansson, P.-E. (2012). COUP model: model use, calibration, and validation.Transactions of the ASABE, 55(4), 1335–1344. Winkler, M., et al. (2021): Snow water equivalents exclusively from snow depths and their temporal changes: the Δsnow model, Hydrol. Earth Syst. Sci., 25, 1165-1187, 10.5194/hess-25-1165-861 2021.

en: Runoff daily mean Alptal 1968-2024 EnviDat updated

en: Runoff, water temperature and electrical conductivity have been measured since 1968 at the outlet of three torrential catchments (with an area of approximately 1 km2 each) located in the Alptal valley: Erlenbach, Lümpenenbach and Vogelbach. This data set provides daily mean values; data at 10-min resolution can be provided on request for the period 1984-2024 (contact: alptal@wsl.ch).

en: Manual snow measurements Alptal (1968-2022)

en:
Snow depth, snow density and snow water equivalent have been measured since winter 1968/69 along more than 15 transects distributed across the Alptal valley representing different altitudes, aspects and land use (closed forest and open meadows). Length of the snow courses: 20 to 30 m. The measurement interval has been weekly to monthly.
More details about the locations and methods can be found in Stähli, M.; Gustafsson, D., (2006). Long-term investigations of the snow cover in a subalpine semi-forested catchment. Hydrological Processes, 20, 411-428. doi: 10.1002/hyp.6058.

en: Snow measurements Alptal 1969-2024 EnviDat updated

en:
This data set includes 56 years of hydrometeorological measurements from small (first-order) catchments in the pre-alpine valley Alptal. Here we provide daily mean values; values in hourly or 10-min resolution can be provided on demand.
Runoff has been measured at the outlet of three small (first-order) catchments of approximately 1 km2 area: Erlenbach (two independent runoff measurements), Vogelbach and Lümpenenbach. The catchments are similar with regard to geology (Flysch) and soil conditions (clay soils), but differ in forest coverage (20 to 60%). A detailed description of the catchments can be found at https://www.wsl.ch/alptal .
Runoff in these small catchments is typically very dynamic and can temporally carry large amounts of sediment and large wood. Thus, the accuracy of the measurements at very large flow is limited.
Meteorological variables have been measured on a meadow (Erlenhöhe) located in the Erlenbach catchment at 1220 m a.s.l. using a standard meteorological station (incl. ventilated air temperature and heated rain gauges). In addition, precipitation has also been recorded at two other locations (in the Vogelbach and Lümpenenbach catchments).
Snow measurements have been conducted weekly to monthly since 1968 at more than 15 locations (30-m transects) representing different altitudes, aspects and land uses (meadow, forest). In addition, snow depth has been recorded continuously since 2003 at Erlenhöhe, and for this location we also include a simulation of snow depth and SWE (using the numerical models COUP and DeltaSnow) that assimilates the manual weekly snow-course measurements. Details on these snow measurements can be found in Stähli, M. and Gustafsson, D. 2006. Hydrol. Proc., 20, 411-428. doi: 10.1002/hyp.6058.
Further information on the methods and sensors can be found at https://www.wsl.ch/alptal .
A first version of this data set (for the period 1968-2017) was uploaded in June 2018 at the occasion of the 50-year anniversary. This original data set was updated in February 2021 (with data from 2018 and 2019), and this data set was used for a longterm trend analysis, submitted for publication in a special issue of Hydrological Processes. Further updates of the data set (with data from 2020 to 2022) were uploaded in March 2023, February 2024 and March 2025.

alptal

display_name: alptal

first-order-catchment

display_name: first-order-catchment

meteorological-data

display_name: meteorological-data

runoff

display_name: runoff

snow

display_name: snow

en: Longterm hydrological observatory Alptal (central Switzerland)


maintainer: Camille Albouy

en: atlantic-region teleo fish-composition bay-biscay actinopterygii edna chondrichthyes dna-metabarcoding

en: Data access

en:
Environmental DNA complements scientific trawling in surveys of marine fish biodiversity (Dataset 2020)

In October 2020 we chose 16 sites from the 2020 EVHOE survey for eDNA sampling. The French international EVHOE bottom trawl survey is carried out annually during autumn in the BoB to monitor demersal fish resources. All sites were located on the continental shelf (26–170 m depth), except one on the upper slope with a depth of 1045 m. To perform eDNA sampling, we collected water samples at 15 sites (Figure 1a). At each site, we sampled seawater using Niskin bottles deployed with a circular rosette. There were nine bottles on the rosette, each of them able to hold ∼5 l of water. At each site, we first cleaned the circular rosette and bottles with freshwater, then lowered the rosette (with bottles open) to 5 m above the sea bottom, and finally closed the bottles remotely from the boat. The 45 l of sampled water was transferred to four disposable and sterilized plastic bags of 11.25 l each to perform the filtration on-board in a laboratory dedicated to the processing of eDNA samples. To speed up the filtration process, we used two identical filtration devices, each composed of an Athena® peristaltic pump (Proactive Environmental Products LLC, Bradenton, Florida, USA; nominal flow of 1.0 l min–1 ), a VigiDNA 0.20 μm filtration capsule (SPYGEN, le Bourget du Lac, France), and disposable sterile tubing. Each filtration device filtered the water contained in two plastic bags (22.5 l), which represent two replicates per sampling site. We followed a rigorous protocol to avoid contamination during fieldwork, using disposable gloves and single-use filtration equipment and plastic bags to process each water sample. At the end of each filtration, we emptied the water inside the capsule that we replaced by 80 ml of CL1 conservation buffer and stored the samples at room temperature following the specifications of the manufacturer (SPYGEN, Le Bourget du Lac, France). We processed the eDNA capsules at SPYGEN, following the protocol proposed by Polanco-Fernández et al., (2020). We performed library preparation and sequencing at Fasteris (Geneva, Switzerland). Specifically, we prepared four libraries using the MetaFast protocol (a ligation-based method) and sequenced them separately. We carried out paired-end sequencing using a MiSeq sequencer (2 × 125 bp, Illumina, San Diego, CA, USA) on two MiSeq Flow Cell Kits (v3; Illumina), following the manufacturer’s instructions. We analysed the sequence reads using the OBITools package (http:
//metabarcoding.org/obitools; Boyer et al., 2016), following the protocol described by Valentini et al. (2016).

Data content:
	* rawdata/: contains the raw reads for each individual sample. One archive contains the paired-end reads specified by the _R1 or _R2 suffix as well as individually tagged PCR replicates (if available) together with an archive containing all extraction and PCR blank samples of the library. Reads have been demultiplexed using cutadapt but not trimmed, individual demultiplexing tags and primers remain present in the sequences.
	* taxadata/: contains the table with all detected taxonomy for each sample after bioinformatic processing (see Polanco et al. 2020 for details; https://doi.org/10.1002/edn3.140) and associated field metadata.
	* metadata/: contains two metadata files, one related to the data collected in the field for each filter, and the second related to the sequencing process in the lab (including the tag sequence, library name, and marker information for each sample)

actinopterygii

display_name: actinopterygii

atlantic-region

display_name: atlantic-region

bay-biscay

display_name: bay-biscay

dna-metabarcoding

display_name: dna-metabarcoding

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Environmental DNA Marine France Evhoe 2020


weissfluhjoch-dataset-for-esm-snowmip

maintainer: Nander Wever

title_for_slug: weissfluhjoch-dataset-for-esm-snowmip

en: esm-snowmip snow snow-depth weissfluhjoch snow-models

en: ini file

en: This ini file is required by data-converter from MeteoIO version 1887 (http://models.slf.ch/p/meteoio/)

en: Dataset Weissfluhjoch for ESM-SnowMIP

en: Conversion script

en:
Use this script to convert WFJ_optimaldataset_v6.smet to wfj.smet, the file that is used for the ESM-SnowMIP project. It also requires the file: WFJ_AirPressure_Data.zip

Use: bash create_wfj_dataset.sh > input/wfj.smet

mimetype: text/x-sh

en: This Weissfluhjoch dataset is a processed version of the Weissfluhjoch dataset version 6 from https://doi.org/10.16904/6. This dataset was specially created for the ESM-SnowMIP project. Here it is documented how this dataset has been created.

esm-snowmip

display_name: esm-snowmip

snow-depth

display_name: snow-depth

snow-models

display_name: snow-models

weissfluhjoch

display_name: weissfluhjoch

en: Weissfluhjoch dataset for ESM-SnowMIP


en: dry-snow-avalanche crack-propagation crack-speed weak-layer snow

en: manual profile taken next to the PSTs. Open the caaml-file using niviz.org

format: OCTET

en: Emodul parametrizations for snow. Some functions from this script are imported from the plotting scripts.

en: pickled version of the manual profile. read into python with pickle. E.g. given the density is used in plotting scripts.

en: pdf Version of the manual profile taken next to the PSTs

en: Jupyter script to load the netcdf files and reproduce Figure 4 from the related publication.

en: netCDF file of dispalcement and strain measurement of PST3 in full view perspective.

en: Jupyter script to load the netcdf files and reproduce Figure 3 from the related publication.

en: netCDF file of displacement and strain measurement of PST3 in closeup view.

en: Jupyter script to load the netcdf files and reproduce Figure 2 from the related publication.

en: netCDF file of dispalcement and strain measurement of PST2 in full view perspective.

en: reference frame used for Digital image correlation of the video of PST1

en: netCDF file of dispalcement and strain measurement of PST1 in full view perspective.

en: netCDF file of dispalcement and strain measurement of PST2 in closeup view.

en:
This dataset contains the experimental results described in Bergfeld et al. (2025). It includes three Propagation Saw Test (PST) experiments, each approximately 9 m long, performed side-by-side on a 37° slope. For each PST, we provide the full field of view along the crack-propagation direction. For the second and third PSTs, we additionally provide close-up recordings focused on the weak layer where cracking occurred.
All data are supplied as netCDF files containing displacement and strain measurements derived from Digital Image Correlation (DIC) analysis. Metadata describing dimensions and units are stored directly within the netCDF files. We recommend using the xarray package in Python to read and work with these datasets.
All figures presented in Bergfeld et al. (2025) can be reproduced using the included Python scripts.
Information about the snowpack is provided in PDF, pickle, and CAAML file formats.

crack-propagation

display_name: crack-propagation

crack-speed

display_name: crack-speed

dry-snow-avalanche

display_name: dry-snow-avalanche

weak-layer

display_name: weak-layer

en: Sub-Rayleigh to supershear fracture transition in long Propagation Saw Tests


maintainer: Lisa Hülsmann

en: tree-mortality mortality-models primeval-forests fagus-sylvatica forest-inventory forest-reserves

en: German data

en:
READ ME for

Hülsmann L, Bugmann H, Commarmot B, Meyer P, Zimmermann S, Brang P
Data from: Does one model fit all? Patterns of beech mortality in natural forests of three European regions.
Ecological Applications http://dx.doi.org/10.5061/dryad.h4s6t

Forest inventory data of beech for the development of individual-tree mortality models from strict forests reserves in Switzerland, Germany and Ukraine.

The data package provides the files
CH_reduced: inventory data of the reduced dataset from Switzerland that was used to assess the influence of additional environmental and stand characteristics on beech mortality
CH: inventory data from strict forest reserves in Switzerland
DE: inventory data from strict forest reserves in Germany
UA: inventory data from a primeval beech forest in Ukraine

A set of three consecutive inventories was used to generate records for the calibration of mortality models based on trees that were alive in the first and second inventory and either dead or alive in the third inventory.
Diameter at breast height: dbh (mm)
Annual relative basal area increment: relBAI (), calculated based on the first and the second dbh measurement as the compound annual growth rate of the trees basal area (Bigler and Bugmann 2004)
Status of the tree: y, 0 = alive, 1 = dead
Length of the mortality period: dt (years)

Additional environmental and stand characteristics were derived for the reduced Swiss dataset.
Note the varying seasonal level of the covariates considering the entire year, the growing season from April to September (G) and the winter month January to March (W).
All climatic covariates were calculated for both the ‘growth’ (2) and the ‘mortality’ period (3). The stand covariates were derived for the second inventory of each record (2).

Mean diameter at breast height: dbh.mean.2 (mm)
Interquartile range of diameter at breast height: dbh.IQR.2 (mm)
Median diameter at breast height: dbh.median.2 (mm)
Basal area per hectare: BA.2 (m2 ha-1)
Number of trees per hectare: N.2 (ha-1)
pH-value: pH ()
Available water capacity in the soil: AWC (mm)
Mean annual precipitation sum: P.2, P.3 (mm)
Mean precipitation sum during growing season: PG.2, PG.3 (mm)
Mean annual air temperature: mT.2, mT.3 (°C)
Mean air temperature during growing season: mTG.2, mTG.3 (°C)
Mean air temperature during winter months: mTW.2, mTW.3 (°C)
Mean growing degree-days: GDD.2, GDD.3 ()
Mean number of months during growing season with water deficit: mDEFdurG.2, mDEFdurG.3 ()
Mean annual maximum water deficit: mDEFmax.2, mDEFmax.3 (mm)
Overall maximum of the annual maximum water deficit: maxDEFmax.2, maxDEFmax.3 (mm)
Mean of cumulative water deficit during growing season: mDEFcumG.2, mDEFcumG.3 (mm)
Overall maximum of cumulative water deficitduring growing season: maxDEFcumG.2, maxDEFcumG.3 (mm)
Percentage of years with at least one month water deficit: percDEF.2, percDEF.3 (%)

en: Ukrainian data

en: Swiss data full

en: Swiss data reduced

en:
The datasets comprise nearly 19’000 trees of European beech (_Fagus sylvatica_ L.) from unmanaged forests in Switzerland, Germany / Lower Saxony and Ukraine. Tree death was modelled as a function of size and growth, i.e., stem diameter (DBH) and relative basal area increment (relBAI). To explain the spatial and temporal variability in mortality patterns, we considered a large set of environmental and stand characteristics.

 Inventory data
The strict forest reserves in Switzerland and Germany had been established in the period of 1961-1975 and 1971-1974, respectively. Every reserve included up to 10 permanent plots ranging from 0.09 to 1.8 ha in size, with slightly irregular re-measurement intervals. Permanent plots with pure or mixed beech stands were selected from the reserves of both networks. Reserves with considerable wind disturbance during the monitored intervals were excluded from the analysis. In addition to data from the Swiss and German reserves, data from a 10 ha plot in the primeval beech forest Uholka in Western Ukraine including three remeasurements were used. The inventory data provide diameter measurements at breast height (dbh) for revisited trees with a diameter of more than 4, 7 and 6 cm for Switzerland, Germany and Ukraine, respectively.

 Mortality predictors
A set of three consecutive inventories was used to generate records for the calibration of mortality models based on trees that were alive in the first and second inventory and either dead or alive in the third inventory. As an explanatory variable, the annual relative basal area increment (relBAI) was calculated based on the first and the second dbh measurement as the compound annual growth rate of the trees basal area. Tree dbh in the second inventory was used in addition to relBAI to model tree status (alive or dead) of the third inventory.

To increase the generality of the mortality models, we selected environmental variables that are known to have a considerable influence on growth and mortality of beech. We emphasized the effects of water availability using a large set of drought characteristics that were calculated based on the local site water balance. We also related beech mortality to soil pH, temperature, precipitation and growing degree-days. Additionally, we considered stand characteristics that reflect the development stage, competition and structure of the forests.

 Further information
For further information, refer to Hülsmann _et al_. (2016) Does one model fit all? patterns of beech mortality in natural forests of three European regions. _Ecological Applications_.

fagus-sylvatica

display_name: fagus-sylvatica

forest-inventory

display_name: forest-inventory

forest-reserves

display_name: forest-reserves

mortality-models

display_name: mortality-models

primeval-forests

display_name: primeval-forests

tree-mortality

display_name: tree-mortality

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Data from: Does one model fit all? patterns of beech mortality in natural forests of three European regions


en: temperature permafrost ground borehole permos

en: PERMOS DATA POLICY

en: PERMOS Data Portal

en: Processed ground temperature measurements at the Fluelapass permafrost borehole A (FLU_0102) in canton Graubunden, Switzerland. The borehole is located at 2394 m asl on a moderate (26°) North-east slope (45°). The surface material is talus and borehole depth is 23 m. Thermistors used YSI 44006. Year of drilling 2002. This borehole is part of the Swiss Permafrost network, PERMOS (www.permos.ch). Contact phillips@slf.ch for details of processing applied.

borehole

display_name: borehole

ground

display_name: ground

permafrost

display_name: permafrost

permos

display_name: permos

temperature

display_name: temperature

en: Processed permafrost borehole data (2394 m asl), Fluelapass A, Switzerland