causal-effect-of-mfoz

title_for_slug: causal-effect-of-mfoz

en: built-up-land-change propensity-score-matching the-major-function-oriented-zone causality fujian-province selection-bias

en: Data and Stata code for repeating the results

en:
Data.xlsx is the variables of 952 townships
Table 1-2 NN(1-1)_noreplace_caliper(0.01).do is STATA code to produce the results in Table 1 and 2
Figure 5 Distribution of the propensity scores.R is R code rto produce Figure 5
Figure 5 Standard mean difference.R is R code rto produce Figure 5

en:
Title: Closer to causality: How effective is spatial planning in governing built-up land expansion in Fujian Province, China?

Research objective: The Major Function Oriented Zone (MFOZ), the first strategic spatial plan in China, is developed to achieve a coordinated regional development, through spatial regulation and zoning of development. The MFOZ he MFOZ divided land into four major function-oriented zones: The development-optimized zone, the development-prioritised zone, the development-restricted zone, and the development-prohibited zone. We used propensity score marching to evaluate the effect of the MFOZ on built-up land expansion in Fujian Province over three time intervals (2013–2015, 2013–2018 and 2013–2020).

Data: Data.xlsx contains the variables of 954 towns in Fujian Province.
Town_ID is the town unique ID;
County_ID is the county unique ID;
City_ID is the city unique ID;
MFOZ is the the development-prioritised zone and the development-restricted zone (The development-optimized zone and the development-prohibited zone are excluded);
Builtup_13_15 is the built-up land expansion from 2013 to 2015;
Builtup_13_18 is the built-up land expansion from 2013 to 2018;
Builtup_13_20 is the built-up land expansion from 2013 to 2020;
Dis2water is the Euclidean distance from the town to the nearest waterbody;
Slope is the the average slope within the town;
GDP is the average GDP in 2010 within the town;
Pop is the average population in 2010 within the town;
Road is the average population in 2010 within the town;
Dis2city is the Euclidean distance from the town to the nearest prefectural city centre;
Nei_Arable, Nei_Forest, and Nei_Built.up are the area of arable land, forest land, and built-up land neighbouring town i in 2010.

Method: we used the propensity score matching to compare the changes in the amount of built-up land in the towns of the development-prioritised zone with the matched towns of the development-restricted zone. Additionally, we used three evaluation intervals (2013–2015, 2013–2018 and 2013–2020) to evaluate temporal variation in the causal effect of the MFOZ on built-up land expansion.

built-up-land-change

display_name: built-up-land-change

causality

display_name: causality

fujian-province

display_name: fujian-province

propensity-score-matching

display_name: propensity-score-matching

selection-bias

display_name: selection-bias

the-major-function-oriented-zone

display_name: the-major-function-oriented-zone

en: Causal effect of MFOZ


maintainer: EnviDat Support

en: adults-and-teenagers visual-attractiveness perception-of-ecosystem-services nfi-photos online-questionnaire-survey

state: active

type: dataset

en: Questionnaire French

format: SERVICE

en: Dataset in csv-format

media_type: text/csv

format: CSV

mimetype: text/csv

en: Questionnaire German

media_type: application/pdf

format: PDF

mimetype: application/pdf

en: Codebook to SPSS-file

en: Questionnaire Italian

en: SPSS-Dataset

en: This questionnaire survey was conducted as an online survey and aimed at investigating the relationship between physical forest characteristics, visual attractiveness of forest and the perception of ecological and cultural ecosystem services in urban forests. Each participant was shown 6 photos out of a pool of 50 photos taken from the Swiss National Forest Inventory (NFI) database. Physical forest characteristics were derived from the photos. The study was conducted as part of the "WaMos meets LFI" (WML) project.

adults-and-teenagers

display_name: adults-and-teenagers

nfi-photos

display_name: nfi-photos

online-questionnaire-survey

display_name: online-questionnaire-survey

perception-of-ecosystem-services

display_name: perception-of-ecosystem-services

visual-attractiveness

display_name: visual-attractiveness

educ

fr: Éducation, culture et sport

de: Bildung, Kultur und Sport

en: Education, culture and sport

it: Istruzione, cultura e sport

envidat

fr: EnviDat: le portail de données environnementales

de: EnviDat: das Umwelt-Datenportal

en: EnviDat: the Environmental Data Portal

it: EnviDat: il portale dei dati ambientali

fr: EnviDat est le portail de données du WSL; il offre un accès uniformisé et réglementé aux données de surveillance et de recherche en matière d’environnement. Ce portail est capable d’héberger et de publier des ensembles de données précieuses et uniques, qui sont partagées aux quatre coins de la planète. Ce faisant, EnviDat favorise la recherche et contribue à l’avancement des sciences environnementales.

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

de: EnviDat ist das Datenportal der WSL für einen einheitlichen und verwalteten Zugang zu Umweltdaten aus Monitoring- und Forschungsprojekten. Auf dem Portal können Datensätze gehostet und veröffentlicht werden. Durch die weltweite Bereitstellung einzigartiger und wertvoller Datensätze leistet EnviDat einen Beitrag zur Forschung im Bereich der Umweltwissenschaften.

it: EnviDat è il portale dati del WSL che fornisce un accesso unificato e gestito ai dati di monitoraggio ambientale e di ricerca. Il portale ha la capacità di ospitare e pubblicare serie di dati preziosi e unici che vengono condivisi in tutto il mondo. Così facendo, EnviDat promuove la ricerca e contribuisce al progresso della scienza ambientale.

political_level: other

wsl

capacity: public

type: organization

approval_status: approved

key: guid

key: uri

value: Envidat Harvester

en: Relationship between physical forest characteristics, visual attractiveness and perception of ecosystem services in urban forests


maintainer: Axel Volkwein

en: field-tests field-test experiments field-data rockfall experiment mass-movements trajectory natural-hazards

en: Jumps and impacts

en: This table contains data of more than 2200 of each jumps and impacts of the test blocks on a grassy slope. It gives there durations in combination with acting accerlartions and the rotational speed of the blocks. The data were retrieved using the block internal accelerometer and rotation sensors. The combination of these data with the measurement from the local positioning system allows the deduction of jump lengths, slope gradient etc.

media_type: application/zip

en: These data contain the point clouds obtained from laser scanning the test slope and the six test blocks used for the experiments. The coordinates of the slope are given in CH-1903 format. The coordinates of the block point clouds are kept in a lokal x/y/z coordinate system.

format: ZIP

mimetype: application/zip

en: Block trajectories recorded from local positioning system

en: This file contains more than 80 rockfall trajectories projected onto the terrain, i.e. the positions of the single blocks over time during the single tests that were recorded by the local positioning system with about 10Hz. It contains the detected positions as well as a smoothened path (see Volkwein et al., Geosciences, 2018). The table also contains the derived velocities and accelerations along the slope (attention: these accelerations are the once that occur during an impact).

en: Overview of all tests

en:
This table gives an overview on all tests performed including
- block used
- start & end position
- number of jumps
- etc.
-

en:
In summer 2014, 6 rock blocks between 20 and 80kg have been thrown in total 111 times down a slope at the Swiss Oberalppass close to the village Tschamut. The slope was mainly covered by grass and its lower part was flat and large enough to provide natural runouts of the single trajectories.

An extensive measurement program has been set up to measure the block trajectories: With surveyor's instruments the slope and the six used rock blocks were scanned and the start and end positions of each test were recorded. During the single events two cameras filmed the trajectories. A special sensor device located within the blocks recorded the acting accelerations and rotational speeds over time. Further, the device emitted a Wifi signal that got detected from eight receivers around the slope. Based on this signal the block position has been recorded over time.

The dataset contains all data that were gathered through above field campaign.

experiment

display_name: experiment

experiments

display_name: experiments

field-data

display_name: field-data

field-test

display_name: field-test

field-tests

display_name: field-tests

mass-movements

display_name: mass-movements

natural-hazards

display_name: natural-hazards

rockfall

display_name: rockfall

trajectory

display_name: trajectory

en: Repetitive trajectory testing in Tschamut 2014


en: monitoring avalanche snow lidar wind-drifted-snow low-cost

en:
We developed a monitoring system using low-cost lidar (Livox Avia) and optical sensors, to measure snow depth variations in an avalanche release area at a high spatiotemporal scale (centimeter to low decimeter spatial resolution and hourly temporal resolution). A detailed description of the setup and a first data analysis is published in:
[Ruttner-Jansen, P., Voordendag, A., Hartmann, T., Glaus, J., Wieser, A., & Bühler, Y. (2024). Monitoring snow depth variations in an avalanche release area using low cost lidar and optical sensors. EGUsphere, 2024, 1-20.](https://nhess.copernicus.org/articles/25/1315/2025/)
This dataset contains hourly 3D lidar data of the snow surface at the test site Braemabuel in Davos, Switzerland from the winter season 2023-2024 (23.11.2023 - 14.04.2024). Braema1 is installed at 2191 m a.s.l. in the slope, looking up into the avalache release area, and Braema2 is installed at 2255 m a.s.l at the ridge, looking down. Both scans together cover an area of about 15000 m².
The data is in format ".las" and contains the points in XYZ [m], in the scanner own coordinate system
- scalar fields: intensity, return number, timestamp, tag, label
-- tag: binary code from Livox (see [Livox Avia Manual](https://terra-1-g.djicdn.com/65c028cd298f4669a7f0e40e50ba1131/Download/Avia/Livox%20Avia%20User%20Manual%20202204.pdf))
-- label: marking outliers (filtered by distance and SOR to get snow particles in the air)

avalanche

display_name: avalanche

lidar

display_name: lidar

low-cost

display_name: low-cost

monitoring

display_name: monitoring

snow

display_name: snow

wind-drifted-snow

display_name: wind-drifted-snow

en: Snow depth mapping by lidar station Braemabuel


en: urban-biodiversity urban-ecology plant-pollinator-interactions gardens garden-experiment zurich pollinator-experiment urbanisation symphytum-officinale bettergardens green-spaces pollination daucus-carota better-gardens onobrychis-viciifolia plant-insect-interaction raphanus-sativus

en:
This repository includes all data presented in the preprint as part of the first submission to Data in Brief:
Reji Chacko, M., Moretti, M., and Frey, D. (2025). A comprehensive dataset on pollinator diversity, visitation rates, individual-based traits, and pollination success across four plant species in an urban garden experiment. EcoEvoRxiv. https://doi.org/10.32942/X2J645
The repository contains eight directories, organised as follows:
data/
├── 01_metadata/  Detailed descriptions of each dataset in this repository
│  └── data_description.xlsx
├── 02_sampling_protocol/  Field sampling protocols in German (original) and English (translation)
│  ├── protocol_english.pdf
│  └── protocol_german.pdf
├── 03_site_data/  Garden site coordinates
│  └── garden_site_coordinates.csv
├── 04_taxonomic_data/  Taxonomic checklist of observed species
│  └── taxa_checklist.csv
├── 05_field_data/  Raw field sampling data
│  └── raw_sampling_data.xlsx
├── 06_trait_data/  Individual-level traits and flower visitation matrix
│  ├── individual_traits.csv
│  └── species_temporal_flower_visitation_matrix.csv
├── 07_pollination_success/  Seed and fruit set per phytometer species
│  ├── daucus_carota_seed_set.csv
│  ├── onobrychis_viciifolia_fruit_set.csv
│  ├── raphanus_sativus_fruit_set.csv
│  ├── raphanus_sativus_seed_set.csv
│  ├── symphytum_officinale_fruit_set.csv
│  └── symphytum_officinale_seed_set.csv
├── 08_scripts/  R scripts to reproduce figures and Table 2 from the paper
│  ├── figure_1.R
│  ├── figure_2.R
│  ├── figure_3.R
│  ├── figure_4.R
│  └── table_2.R
└── README.txt
Note: The metadata Excel file contains a separate sheet describing each dataset, so individual file descriptions are not repeated here.

en: This dataset contains detailed records of pollinator communities and plant reproductive outcomes from an urban garden experiment in Zurich, Switzerland. It includes flower visitation frequency and pollinator species richness for four insect-pollinated plant species observed across 24 home gardens. The dataset spans 167 pollinator taxa, with over 5,700 individuals identified, mostly to species or genus level. It features individual-level trait measurements for pollinators, such as body size and tongue lengths. Measures of pollination success, including seed and fruit set, are provided for each plant species.

better-gardens

display_name: better-gardens

bettergardens

display_name: bettergardens

daucus-carota

display_name: daucus-carota

garden-experiment

display_name: garden-experiment

gardens

display_name: gardens

green-spaces

display_name: green-spaces

onobrychis-viciifolia

display_name: onobrychis-viciifolia

plant-insect-interaction

display_name: plant-insect-interaction

plant-pollinator-interactions

display_name: plant-pollinator-interactions

pollination

display_name: pollination

pollinator-experiment

display_name: pollinator-experiment

raphanus-sativus

display_name: raphanus-sativus

symphytum-officinale

display_name: symphytum-officinale

urban-biodiversity

display_name: urban-biodiversity

urban-ecology

display_name: urban-ecology

urbanisation

display_name: urbanisation

zurich

display_name: zurich

educ

en: Education, culture and sport

en: Comprehensive dataset of pollinator diversity and visitation rates with individual-based traits and pollination success across four urban garden plant species


en: environmental-dna climate-change arctic fish community-structure

en: Data and code to reproduce the analysis of "Community structure and range shifts in Arctic marine fish under climate change"

en: Zip file with data and code

en:
Data and code for the paper published in Ecography: Community structure and range shifts in Arctic marine fish under climate change
Abstract:
Arctic marine ecosystems are rapidly transforming due to climate change. Warming temperatures and shrinking sea ice are enabling boreal fish to expand northward, possibly disturbing cold-adapted Arctic species assemblages. Species range shifts have been documented in the Bering and Barents Seas, raising concerns about ecosystem restructuring. Range shifts are especially difficult to detect in the Arctic due to sparse and inconsistent data. Here, we studied fish composition from eDNA water samples taken in East Greenland, Svalbard, the Barents Sea, and the Kara Sea during the TOPtoTOP and Arctic Century expeditions. We examined the environmental drivers of fish community structure using global dissimilarity models. We calculated the decadal rate of temperature change to identify the fastest-changing areas. We compared fish detections from eDNA with published historical records for the Kara Sea to assess possible range expansions. We found that temperature was the main factor influencing the taxa turnover of fish communities, with Gadidae and Liparis sp. driving the greatest compositional differences. Over the past 30 years, temperatures increased by 0.2 to 0.6°C per decade at our study sites, with the highest increases in western Svalbard and the lowest in the eastern Kara Sea. Despite the apparent dependence on temperature, we identified only one species detected outside its known latitudinal range, and five species in the Kara Sea with recent occurrences or representing an extended distribution. Our study suggests that temperature, the main driver of fish community assembly, is increasing rapidly in the Arctic, and a few species have likely already shifted recently, or at least their detections are new in some areas. While these detections cannot be definitively linked to range shifts, our results highlight the need to improve monitoring of high-latitude fish communities to detect and predict future ecosystem changes.
Article:
Marques, V., Fopp, F., Jaquier, M., Ellingsen, K. E., Yoccoz, N., Jucker, M., ...Pellissier, L. (2025). Community structure and range shifts in Arctic marine fish under climate change. Ecography, e8014. doi: 10.1002/ecog.08014
Data:
The resource contains a zip file with the entire project structure.
Data README:
 Intro
This repo presents data and code associated with the paper "Community structure and range shifts in Arctic marine fish under climate change" published in Ecography
 Usage
Launch the `main.R` script to reproduce the entire analysis.
It executes code blocks to create the data necessary for the analysis and then creates the figures.
💣 attention, total size is expected ~20 Go and the script will query the CMEMS database to fetch environmental data
 Tools
To make the scripts run, you need R, R packages (see session info below), python3, and the copernicusmarine python tool (https://pypi.org/project/copernicusmarine/).

 SessionInfo
```
sessionInfo()
R version 4.4.0 (2024-04-24)
Platform: aarch64-apple-darwin20
Running under: macOS 15.5
Matrix products: default
BLAS:  /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.12.0
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
time zone: Europe/Zurich
tzcode source: internal
attached base packages:
[1] stats   graphics grDevices
[4] utils   datasets methods
[7] base
other attached packages:
 [1] lwgeom_0.2-14
 [2] metR_0.15.0
 [3] ggtext_0.1.2
 [4] scico_1.5.0
 [5] ggnewscale_0.5.0
 [6] colorspace_2.1-1
 [7] climetrics_1.0-15
 [8] rts_1.1-14
 [9] xts_0.14.0
[10] zoo_1.8-12
[11] ggpubr_0.6.0
[12] adespatial_0.3-23
[13] ggspatial_1.1.9
[14] colorplaner_0.1.4
[15] ape_5.8
[16] factoextra_1.0.7
[17] corrgram_1.14
[18] FactoMineR_2.11
[19] betapart_1.6
[20] gdm_1.5.0-9.1
[21] terra_1.7-78
[22] rnaturalearth_1.0.1
[23] ggrepel_0.9.5
[24] vegan_2.6-6.1
[25] lattice_0.22-6
[26] permute_0.9-7
[27] cowplot_1.1.3
[28] tidyterra_0.6.1
[29] sf_1.0-16
[30] egg_0.4.5
[31] gridExtra_2.3
[32] patchwork_1.2.0
[33] viridis_0.6.5
[34] viridisLite_0.4.2
[35] mgcv_1.9-1
[36] nlme_3.1-165
[37] MBA_0.1-0
[38] reshape2_1.4.4
[39] conflicted_1.2.0
[40] lubridate_1.9.3
[41] forcats_1.0.0
[42] stringr_1.5.1
[43] dplyr_1.1.4
[44] purrr_1.0.2
[45] readr_2.1.5
[46] tidyr_1.3.1
[47] tibble_3.2.1
[48] ggplot2_3.5.1
[49] tidyverse_2.0.0
[50] devtools_2.4.5
[51] usethis_2.2.3
loaded via a namespace (and not attached):
 [1] splines_4.4.0
 [2] later_1.3.2
 [3] bitops_1.0-7
 [4] minpack.lm_1.2-4
 [5] XML_3.99-0.16.1
 [6] lifecycle_1.0.4
 [7] rstatix_0.7.2
 [8] doParallel_1.0.17
 [9] MASS_7.3-60.2
 [10] flashClust_1.01-2
 [11] backports_1.5.0
 [12] magrittr_2.0.3
 [13] rmarkdown_2.27
 [14] yaml_2.3.8
 [15] remotes_2.5.0
 [16] httpuv_1.6.15
 [17] sp_2.1-4
 [18] sessioninfo_1.2.2
 [19] pkgbuild_1.4.4
 [20] mapproj_1.2.11
 [21] pbapply_1.7-2
 [22] DBI_1.2.3
 [23] RColorBrewer_1.1-3
 [24] ade4_1.7-22
 [25] maps_3.4.2
 [26] abind_1.4-5
 [27] pkgload_1.3.4
 [28] RCurl_1.98-1.14
 [29] itertools_0.1-3
 [30] yaImpute_1.0-34
 [31] rcdd_1.6
 [32] units_0.8-5
 [33] adegenet_2.1.10
 [34] codetools_0.2-20
 [35] xml2_1.3.6
 [36] adephylo_1.1-16
 [37] DT_0.33
 [38] tidyselect_1.2.1
 [39] RNeXML_2.4.11
 [40] raster_3.6-26
 [41] farver_2.1.2
 [42] jsonlite_1.8.9
 [43] e1071_1.7-14
 [44] phylobase_0.8.12
 [45] ellipsis_0.3.2
 [46] iterators_1.0.14
 [47] emmeans_1.10.4
 [48] systemfonts_1.1.0
 [49] foreach_1.5.2
 [50] progress_1.2.3
 [51] tools_4.4.0
 [52] ragg_1.3.2
 [53] snow_0.4-4
 [54] Rcpp_1.0.13
 [55] glue_1.8.0
 [56] xfun_0.44
 [57] withr_3.0.0
 [58] fastmap_1.2.0
 [59] boot_1.3-30
 [60] latticeExtra_0.6-30
 [61] fansi_1.0.6
 [62] spData_2.3.1
 [63] digest_0.6.35
 [64] timechange_0.3.0
 [65] R6_2.5.1
 [66] mime_0.12
 [67] estimability_1.5.1
 [68] wk_0.9.1
 [69] textshaping_0.4.0
 [70] jpeg_0.1-10
 [71] utf8_1.2.4
 [72] generics_0.1.3
 [73] data.table_1.15.4
 [74] class_7.3-22
 [75] prettyunits_1.2.0
 [76] httr_1.4.7
 [77] htmlwidgets_1.6.4
 [78] scatterplot3d_0.3-44
 [79] spdep_1.3-5
 [80] pkgconfig_2.0.3
 [81] gtable_0.3.5
 [82] picante_1.8.2
 [83] adegraphics_1.0-21
 [84] htmltools_0.5.8.1
 [85] carData_3.0-5
 [86] profvis_0.3.8
 [87] multcompView_0.1-10
 [88] scales_1.3.0
 [89] leaps_3.2
 [90] png_0.1-8
 [91] doSNOW_1.0.20
 [92] geometry_0.4.7
 [93] rnaturalearthhires_1.0.0.9000
 [94] knitr_1.47
 [95] rstudioapi_0.16.0
 [96] rncl_0.8.7
 [97] uuid_1.2-0
 [98] tzdb_0.4.0
 [99] checkmate_2.3.1
[100] coda_0.19-4.1
[101] magic_1.6-1
[102] proxy_0.4-27
[103] cachem_1.1.0
[104] KernSmooth_2.23-24
[105] parallel_4.4.0
[106] miniUI_0.1.1.1
[107] s2_1.1.6
[108] pillar_1.9.0
[109] grid_4.4.0
[110] vctrs_0.6.5
[111] urlchecker_1.0.1
[112] promises_1.3.0
[113] car_3.1-2
[114] xtable_1.8-4
[115] cluster_2.1.6
[116] evaluate_0.24.0
[117] mvtnorm_1.2-5
[118] cli_3.6.3
[119] compiler_4.4.0
[120] rlang_1.1.4
[121] crayon_1.5.2
[122] ggsignif_0.6.4
[123] labeling_0.4.3
[124] interp_1.1-6
[125] classInt_0.4-10
[126] plyr_1.8.9
[127] fs_1.6.4
[128] stringi_1.8.4
[129] deldir_2.0-4
[130] munsell_0.5.1
[131] Matrix_1.7-0
[132] hms_1.1.3
[133] seqinr_4.2-36
[134] shiny_1.8.1.1
[135] gridtext_0.1.5
[136] igraph_2.0.3
[137] broom_1.0.6
[138] memoise_2.0.1
[139] fastmatch_1.1-4
```
 Data content and reproducibility
Uncleaned raw table out of the bioinformatics pipeline can be found concatenated in `outputs/table_raw_before_cleaning.csv`, yet we caution readers to properly read the cleaning scripts should they wish to reproduce our analysis and this file is presently uncleaned.

arctic

display_name: arctic

climate-change

display_name: climate-change

community-structure

display_name: community-structure

environmental-dna

display_name: environmental-dna

fish

display_name: fish

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Data and code for Community structure and range shifts in Arctic marine fish under climate change


en: climate-change precipitation long-term meteorology temperature relative-humidity meteo swiss-forest-lab wind-speed par

en: Data plot of the forest station (VOB)

en: Data overview for air temperature, relative humidity, precipitation, PAR, wind speed.

en: Site aerial photo (Vordemwald)

en: Site aerial photo from both Vordemwald stations. Source: Google. 2016. Site aerial photo from both Vordemwald stations. Retrieved November 11, 2016, from https://www.google.ch/maps

mimetype: image/jpeg

en: Site photo of the field station (VOF)

en: Site photo of the field stationfrom the side.

en: Field station data (VOF)

en: Data file.

en: Forest station data (VOB)

en: Data plot of the field station (VOF)

en: Site photo of the forest station (VOB)

en: Site photo of the forest station from the side.

en: High quality meteorological data are needed for long-term forest ecosystem research, particularly in the light of global change. The long-term data series published here comprises almost 20 years of measurements for two meteorological stations in Vordemwald in Switzerland where one station is located within a natural mixed forest stand (VOB) with European silver fir (_Abies alba_; 110 yrs) and oak trees (_Quercus sp._; 190-210 yrs) as dominant tree species. A second station is situated in the very vicinity outside of the forest (field station, VOF). The meteorological time series are presented in hourly time resolution of air temperature, relative humidity, precipitation, photosynthetically active radiation (PAR) and wind speed. Vordemwald is part of the Long-term Forest Ecosystem Research Programme (LWF) established and maintained by the Swiss Federal Research Institute WSL.

long-term

display_name: long-term

meteo

display_name: meteo

meteorology

display_name: meteorology

par

display_name: par

precipitation

display_name: precipitation

relative-humidity

display_name: relative-humidity

swiss-forest-lab

display_name: swiss-forest-lab

temperature

display_name: temperature

wind-speed

display_name: wind-speed

en: Vordemwald, Switzerland: Long-term forest meteorological data from the Long-term Forest Ecosystem Research Programme (LWF), from 1996 onwards


en: perialpine-lakes switzerland hydrologic-and-hydrodynamic-modelling lake-level-regulation climate-change

en: Lake water level scenarios CH2018

en: Lake water level scenarios for Lake Walen, Lake Zurich, Lake Brienz and Lake Thun.

format: XLS

en: Lake characteristics

en: Lake characteristics: stage-area relation for Lake Walen, Lake Zurich, Lake Brienz and Lake Thun, stage-discharge relations for the unregulated Lake Walen and semi-regulated Lake Brienz and, lake level management rules for the two regulated lakes Zurich and Thun.

en: Lake outflow scenarios CH2018

en: Lake outflow scenarios for Lake Walen, Lake Zurich, Lake Brienz and Lake Thun.

en:
The dataset "Lake_climate_change_scenarios_CH2018" provides simulation-based climate change impact scenarios for perialpine lakes in Switzerland. These transient future scenarios were produced by combining the hydrologic model PREVAH with the hydrodynamic model MIKE11 to simulate daily lake water level (Lake_water_level_scenarios_CH2018.xls) and outflow scenarios (Lake_outflow_scenarios_CH2018.xls) from 1981 to 2099, using the Swiss Climate Change Scenarios CH2018. The future scenarios contain a total of 39 model members for three Representative Concentration Pathways, RCP2.6 (concerted mitigation efforts), RCP4.5 (limited climate mitigation) and RCP8.5 (no climate mitigation measures). These scenarios result from the study titled "Lower summer lake levels in regulated perialpine lakes, caused by climate change," authored by Wechsler et al. in 2023.

The dataset emphasizes four specific Swiss lakes, each subject to different degrees of lake level management: an unregulated lake (Lake Walen), a semi-regulated lake (Lake Brienz), and two regulated lakes (Lake Zurich and Lake Thun).

In addition, the file (Lake_characteristics.xlsx) includes data used in the modeling process, encompassing the stage-area relation for the four lakes, stage-discharge relations for the unregulated and semi-regulated lakes, and lake level management rules for the two regulated lakes.

hydrologic-and-hydrodynamic-modelling

display_name: hydrologic-and-hydrodynamic-modelling

lake-level-regulation

display_name: lake-level-regulation

perialpine-lakes

display_name: perialpine-lakes

switzerland

display_name: switzerland

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Lake climate change scenarios CH2018


en: winter-energy-production albedo snow photovoltaic shortwave-radiation

en: Data Forward Scattering

en: GROUNDEYE model for multiple forward scattering in snow-covered terrain. Meteorological and topographical input data set for the Meierhofertäli near Davos, Switzerland, September 2017 - August 2018. Output data for September 2017 - August 2018 at hourly resolution and every pixel. Post-processing scripts for plotting and analysis.

en:
 Overview
We present GROUNDEYE, a new model of radiative transfer over mountainous terrain, which considers for the first time the forward scattering properties of snow.
Embedded in the surface process model Alpine3D, the new terrain radiation model GROUNDEYE receives interpolated real weather data with diffuse and direct broadband shortwave radiation for each pixel as well as a spatially variable plane albedo from the module SNOWPACK.

 Format
The GROUNDEYE model is written in c++, as is the entire environment of Alpine3d. The input and output data sets are .xlsx or .txt format, pre- and postprocessing including the generation of all figures is in .R format.

 Structure
In Data_Forward_Scattering.zip you will find all necessary data and model details to
reproduce the results of the JGR publication "How forward-scattering snow and terrain change the Alpine radiation balance with application to solar panels"

 - 	Model Input Data contains the meteorological and topographic input data sets, the BRDF, and preprocessing scripts.
 - Model Code contains the full model Alpine3d including the radiative transfer module GROUNDEYE.
 - Model Output Data contains the results of the simulation of terrain irradiance and irradiance of solar panels; hourly resolution, 1. Sptember 2017 - 31. August 2018.
 - Measurements Solar Testsite contains information and measurements of the solar testsite at the Totalp near Davos, Switzerland.
 - Postprocessing contains all R-Scripts used for the analysis and
plotting of the corresponding data.

In each of these folders you will find detailed information in
the file 'About this Folder.txt'.

albedo

display_name: albedo

photovoltaic

display_name: photovoltaic

shortwave-radiation

display_name: shortwave-radiation

snow

display_name: snow

winter-energy-production

display_name: winter-energy-production

en: Data, Code Link and Metadata on Forward Scattering of Snow at Totalp


maintainer: Lisa Hülsmann

en: inventory-data empirical-mortality-models forest-reserves tree-growth tree-mortality

en: Calibration data

en:
A set of three consecutive inventories was used to generate records for the calibration of mortality models based on trees that were alive in the first and second inventory and either dead or alive in the third inventory.

 Meta data
Reserve: Name of the forest reserve

Plot: Permanent plot number

 Tree data
Species: Latin species name (or species group, cf. _Quercus_ spp.)

y: Status of the tree with 0 = alive and 1 = dead

dt: Length of the mortality period (years)

DBH: Diameter at breast height (mm) of the second inventory

relBAI: Annual relative basal area increment (-) calculated based on the first and the second DBH measurement as the compound annual growth rate of the trees basal area

 Stand data
_All stand variables were calculated for the second inventory._

mDBH: Mean diameter at breast height (mm)

iqrDBH: Interquartile range of diameter at breast height (mm)

BA: Basal area per hectare (m2 ha-1)

N: Number of trees per hectare (ha-1)

 Climate data
_Both climate variables were calculated for the period between the second and the third inventory._

P: Mean annual precipitation sum (mm)

mT: Mean annual air temperature (°C)

en:
The dataset comprises > 90 000 records from inventories in 54 strict forest reserves in [Switzerland](https://www.wsl.ch/de/wald/biodiversitaet-naturschutz-urwald/naturwaldreservate.html) and [Lower Saxony / Germany](http://naturwaelder.de/) along a considerable environmental gradient. It was used to develop parsimonious, species-specific mortality models for 18 European tree species based on tree size and growth as well as additional covariates on stand structure and climate.

 Inventory data
Measurements had been conducted repeatedly on up to 14 permanent plots per reserve for up to 60 years with re-measurement intervals of 4 - 27 years. The permanent plots vary in size between 0.03 and 3.47 ha. The inventories provide diameter measurements at breast height (DBH) and information on the species and status (alive or dead) of trees with DBH ≥ 4 cm for Switzerland and ≥ 7 cm for Germany.

 Data selection
We excluded three permanent plots where at least 80 % of the trees died during an interval of 10 years, and mortality could be clearly assigned to a disturbance agent. Mortality in the remaining stands was rather low, with a mean annual mortality rate of 1.5 % and strong variation between plots from 0 to 6.5 % (assessed for trees of all species with DBH ≥ 7 cm).
We only used data from permanent plots with at least 20 trees per species to obtain reliable plot-level mortality rates even for species with low mortality rates (about 5 % during 10 years), and selected tree species occurring on at least 10 plots to cover sufficient ecological gradients. This led to a dataset of 197 permanent plots and 18 tree or shrub species: _Abies alba_ Mill., _Acer campestre_ L., _Acer pseudoplatanus_ L., _Alnus incana_ Moench., _Betula pendula_ Roth, _Carpinus betulus_ L., _Cornus mas_ L., _Corylus avellana_ L., _Fagus sylvatica_ L., _Fraxinus excelsior_ L., _Picea abies_ (L.) Karst, _Pinus mugo_ Turra, _Pinus sylvestris_ L., _Quercus pubescens_ Willd., _Quercus_ spp. (_Q. petraea_ Liebl. and _Q. robur_ L.; not properly differentiated in the Swiss inventories), _Sorbus aria_ Crantz, _Tilia cordata_ Mill. and _Ulmus glabra_ Huds..

 Predictors of tree mortality
We considered tree size and growth as key indicators for mortality risk. Radial stem growth between the first and second inventory and DBH at the second inventory were used to predict tree status (alive or dead) at the third inventory. To this end, the annual relative basal area increment (relBAI) was calculated as the compound annual growth rate of the trees basal area. Additional covariates on stand structure and climate comprise mean annual precipitation sum (P), mean annual air temperature (mT), the mean and the interquartile range of DBH (mDBH, iqrDBH), basal area (BA) and the number of trees (N) per hectare.

 Further information
For further information, refer to Hülsmann _et al_. (in press) How to kill a tree – Empirical mortality models for eighteen species and their performance in a dynamic forest model. _Ecological Applications_.

empirical-mortality-models

display_name: empirical-mortality-models

forest-reserves

display_name: forest-reserves

inventory-data

display_name: inventory-data

tree-growth

display_name: tree-growth

tree-mortality

display_name: tree-mortality

en: Calibration data for empirical mortality models of 18 European tree species


envidat-supports-open-science

maintainer: Ionut Iosifescu Enescu

title_for_slug: envidat-supports-open-science

en: envidat juypter-notebooks open-science wsl research-data-management

en: Article as PDF

en:
The article "EnviDat Supports Open Science" originally appeared in WSLintern No. 3 (2020), page 14-15 and it is republished here with permission from the WSLintern editorial team. It contains guidelines for WSL scientists about the main issues behind Open Science and how to pragmatically approach the complexities of doing Open Science with EnviDat’s support.

License: This article is released by WSL and the EnviDat team to the public domain under a Creative Commons 4.0 CC0 "No Rights Reserved" international license. You can reuse the information contained herein in any way you want, for any purposes and without restrictions.

envidat

display_name: envidat

juypter-notebooks

display_name: juypter-notebooks

open-science

display_name: open-science

research-data-management

display_name: research-data-management

wsl

display_name: wsl

en: EnviDat Supports Open Science


en: flora landscape-evolution geology endemism madagascar

en: Escarpment evolution drives the diversification of the Madagascar flora

en: This upload contains the data (species checklist, species range maps, time-calibrated phylogenies, topographic change, etc.) generated, analyzed, and presented in the paper .

en: Data v1.0

en: Although much of the endemic biodiversity of Madagascar can be attributed to its isolation as an island in the Indian Ocean, the high rates of speciation throughout its geologic history suggest an influence of local-scale landscape dynamics. The topographic evolution of Madagascar is dominated by the formation of high-relief continental rift escarpment and we argue that the erosion and landward retreat of this topography creates habitat heterogeneity that has served as a speciation pump for the island. The highest plant richness is found along the escarpment and is characterized by steady diversification rates over the last 45 Ma. Modeled landscape evolution by escarpment retreat demonstrates opportunities for allopatric speciation by transient habitat fragmentation through multiple mechanisms, including catchment expansion, isolation of highland remnants and formation of topographic and river barriers The segregation of floral phylogenetic turnover parallel to the escarpment is consistent with these mechanisms and indicates the importance of erosion-driven landscape dynamics on speciation.

endemism

display_name: endemism

flora

display_name: flora

geology

display_name: geology

landscape-evolution

display_name: landscape-evolution

madagascar

display_name: madagascar

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal


en: climate-change speed2zero relative-humidity precipitation air-temperature time-series wind-speed shortwave-radiation meteo-station

en: Data link

en:
This dataset provides 50 years of seasonal synthetic hourly time series for five meteorological variables: incoming shortwave radiation, total precipitation, relative humidity, 2-meter air temperature and wind speed.

The data are generated from observational records (1990–present) from nine MeteoSwiss stations (ABO, BAS, BER, LUG, PUY, SCU, SIO, STG, WFJ). We use a sampling approach that preserves both the temporal structure and inter-variable dependencies. Specifically, the time series are constructed by drawing 7-day blocks from historical observations, ensuring realistic short-term variability and maintaining the physical coherence between variables.

The synthetic sequences are constrained to follow daily temperature change trajectories corresponding to three future climate scenarios for the period 2040–2070: RCP2.6, RCP8.5 and RCP0: a counterfactual scenario with no long-term warming trend, but with temperature variability consistent with the RCP2.6 one.
The temperature constraints are derived from projections downscaled at the staiton level, available at: https://www.envidat.ch/#/metadata/climate-change-scenarios-at-hourly-resolution

air-temperature

display_name: air-temperature

climate-change

display_name: climate-change

meteo-station

display_name: meteo-station

precipitation

display_name: precipitation

relative-humidity

display_name: relative-humidity

shortwave-radiation

display_name: shortwave-radiation

time-series

display_name: time-series

wind-speed

display_name: wind-speed

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Meteorological Time Series Aligned with Projected Temperature Changes


historical-vegetation-height-model-nfi

maintainer: Mauro Marty

title_for_slug: historical-vegetation-height-model-nfi

en: historical vhm photogrammetry nfi dsm forest

media_type: text/plain

en: Description of available data

format: TXT

en: 1990-1998 Vegetation Height Model

format: GeoTIFF

en: 1979-1985 Vegetation Height Model

en: 1985-1991 Vegetation Height Model

en: 1998-2006 Vegetation Height Model

en:
The main datasets available are 4 nationwide **Digital Surface Models (DSMs)** and corresponding **Vegetation Height Models (VHMs)** with a spatial resolution of 1 m.
The Vegetation Height Models are calculated by subtraction of a Digital Terrain Model (swissAlti3d version 2017, swisstopo) from the generated DSMs. DSMs were derived by image matching of **scanned historical images** (panchromatic 8-bit) acquired with a RC10 frame camera, in the context of the swisswide image acquisition campaigns of swisstopo.
Nationwide products could be generated for the **four epochs**
 1979-1985 / 1985-1991 / 1990-1998 / 1998-2006.
Additional information about successful image matching vs. interpolation of pixels and about the year of image acquisition are available in the corresponding files (**matched_area_xxxx_xxxx_binay.tif** and **meta_acquisition_year_xxxx_xxxx.json**, respectively).
To separate vegetation from non-vegetation areas a mask derived from a combination of information of the Topographic landscape model - TLM (swisstopo) and a NDVI layer was used and is supplied as **"TLM_mask.tif"**
Due to the occurrence of unrealistic vegetation height values caused by the failure of the image matching process (mainly overexposed images and clouds or very steep rocky terrain), pixel values > 60 m were set to NoData and < 0 m to 0.
All datasets are available in the Reference System **LV95 (EPSG: 2056) LN02 (EPSG: 5728)** and share the common **extent definition** (xmin ymin xmax ymax): 2480000 1070000 2840000 1300000

dsm

display_name: dsm

forest

display_name: forest

historical

display_name: historical

nfi

display_name: nfi

photogrammetry

display_name: photogrammetry

vhm

display_name: vhm

en: Historical Vegetation Height Model NFI


en: water-scarcity reservoirs water-demand climate-change water-supply

en: Water supply

en: Simulated discharge series for a reference period 1981-2010 and till the end of the century. Data are provided for 39 climate model chains and a control run based on the observed meteorology. Data are provided at daily resolution (mm/d).

en: Water demand version 2 (corrected version)

en: Water demand (deprecated)

en:
Warning: please use the corrected version 2, since this file contains errors for certain categories such as Livestock, Industry or Houshold.

Water demand estimates for the 307 medium-sized catchments for different categories for current and future conditions. One text file is provided per demand category. One column corresponds to one catchment (IDs compare to shapefile), The data are provided at monthly resolution in mm/d and can be converted to volumes by using the catchment area. E.g.
Q[mm/d] * catchment area [m²] /1000 = Q[m³/d]
or to obtain discharge in m³/s
Q[mm/d] * catchment area [m²]/1000/24/3600 = Q [m³/s].
Future irrigation and hydropower water demand are provided per climate model chain.

en: Shapefile of 307 catchments in Switzerland

en: Shapefile of 307 catchments for which estimates of water supply, demand, and reservoir volumes are provided. The OBJECTID entry corresponds to the catchment ID which is used as a reference in the other datasets provided.

en: Reservoir volumes

en: Reservoir volume for the 307 medium-sized catchments for different storage categories: natural lakes, artificial reservoirs, reservoirs for artificial snow production, drinking water reservoirs, and usable volumes of natural lakes. Unit: Mio m³. One column per catchment (see shapefile).

en:
The dataset Hydro-CH2018 reservoirs provides estimates of current and future water supply, water demand, and storage volumes for 307 medium-sized catchments in Switzerland.
Water supply for current (1981-2010) and future (2070-2099) climate conditions was simulated using the hydrological model PREVAH. For modeling current water supply, observed meteorological time series were used as input, while simulated meteorological time series derived from 39 model chains of the CH2018 initiative were used as an input for simulating future climate conditions.

Water demand was estimated for six categories:

- 1) Drinking water (households and tourism),
- 2) industry (second and third sector),
- 3) artificial snow production,
- 4) agriculture (irrigation and livestock feeding),
- 5) ecology (residual flows), and
- 6) hydropower.

Future estimates consider changes in demand related to population growth and changes in the hydrological conditions.
Storage volumes are provided for natural lakes (storage capacities and usable volumes), artificial reservoirs, reservoirs for artificial snow production, and drinking reservoirs.

A detailed description of the simulation and estimation procedures can be found in

*  Brunner, M.I., Björnsen Gurung, A., Zappa, M., Zekollari, H., Farinotti, D., Stähli, M., 2019. Present and future water scarcity in Switzerland: Potential for alleviation through reservoirs and lakes. Sci. Total Environ. 666, 1033–1047. https://doi.org/10.1016/j.scitotenv.2019.02.169.

This dataset contains the following information:

1.	Shapefile with the 307 medium-sized Swiss catchments.
2.   Textfiles with the water supply simulations for the control run and the 39 climate model chains (one file per chain) at daily resolution for the 307 catchments.
3.	Textfiles with the current and future demand estimates per category at monthly resolution for the 307 catchments.
4.	Textfiles with the storage volumes per category and catchment.

reservoirs

display_name: reservoirs

water-demand

display_name: water-demand

water-scarcity

display_name: water-scarcity

water-supply

display_name: water-supply

en: Hydro-CH2018 reservoirs


en: relative-humidity temperature climate-change meteo par wind-speed meteorology swiss-forest-lab long-term precipitation

en: Site photo of the forest station (LEB)

en: Site photo of the forest station from below (viewing upwards the slope)

en: Data plot of the forest station (LEB)

en: Data overview for air temperature, relative humidity, precipitation, PAR, wind speed.

en: Forest station data (LEB)

en: Data file.

en: High quality meteorological data are needed for long-term forest ecosystem research, particularly in the light of global change. The long-term data series published here comprises almost 20 years of measurements for one meteorological station in Lens in Switzerland which is located within a natural coniferous forest with Scots pine (_Pinus sylvestris_; 150-170 yrs)) as dominant tree species. The meteorological time series are presented in hourly time resolution of air temperature, relative humidity, precipitation, photosynthetically active radiation (PAR) and wind speed. Lens is part of the Long-term Forest Ecosystem Research Programme (LWF) established and maintained by the Swiss Federal Research Institute WSL.

climate-change

display_name: climate-change

long-term

display_name: long-term

meteo

display_name: meteo

meteorology

display_name: meteorology

par

display_name: par

swiss-forest-lab

display_name: swiss-forest-lab

temperature

display_name: temperature

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Lens, Switzerland: Long-term forest meteorological data from the Long-term Forest Ecosystem Research Programme (LWF), from 1997 onwards


en: davos avalanches snow-hydrology dischma photogrammetry snow-depth-distribution

en: Snowdepth maps

en:
The available datasets are snow depth maps with a spatial resolution of 0.5 m derived from images of the survey camera Vexcel Ultracam mounted on a piloted airplane. Image acquisition was carried out during the approximately peak of winter (time when the thickest snowpack is expected) in spring. The snow depth maps are calculated by the subtraction of a summer-DTM from the processed winter- DSM of the corresponding date. The summer-DTM used was derived from a point cloud of an airborne laser scanner from 2020.

Due to the occurrence of inaccuracies of the calculated snow depth values caused by the photogrammetric method, we applied different masks to significantly increase the reliability of the snow depth maps. We masked out settled areas, high-frequented streets and technical constructions, pixels with high vegetation (height > 0.5 m) , outliers and unrealistic snow depth values. In addition, we modified the snow depth values of snow-free pixels to 0.
The information on buildings and infrastructure comes from the exactly classified ALS point cloud and the TLM dataset from Swisstopo (https://www.swisstopo.admin.ch/de/geodata/landscape/tlm3d.html#links). High vegetation is also derived from the classification and the calculated object height from the point cloud.
Outliers and unrealistic snow depth values are defined as negative snow depth values and snow depths exceeding 10 m. The classification of each pixel of the corresponding orthophoto into snow-covered or snow-free is based on the application of a threshold of the NDSI or manually determined ratios of the RGB values.

An extensive accuracy assessment proves the high accuracy of the snow depth maps with a root mean square error of 0.25 m for the year 2017 and 0.15 m for the following snow depth maps.

The work is published in:

avalanches

display_name: avalanches

davos

display_name: davos

dischma

display_name: dischma

snow-depth-distribution

display_name: snow-depth-distribution

snow-hydrology

display_name: snow-hydrology

en: Snow depth mapping by airplane photogrammetry (2017 -  ongoing)


en: abies-alba drought soil-water vpd pinus-sylvestris dendrochronology stable-isotopes picea-abies tree-ring

en:
Description of key files
- climate_arranged_day0.Rds – aligned climate data according to the onset day
- climate_raw.Rds – aggregated climate data into hourly estimates
- d13cAtmCorr.Rds – atmospherically corrected shot-level δ13C for each site and tree
- d13c_mean. Rds – atmospherically corrected shot-level δ13C for each site, averaged across individual trees.
- climate_VPD_soil.Rds – processed VPD and SWP data
- climate_smoothed_method_figure.Rds – climate data used for Figure 1
- df_max_day. Rds – calculated maximum day of year for all onset days
- "1 arrange climate according to day0.R" – R script to arrange climate data according to the onset day
- "2 dendroTools analysis and heatmaps.R" – R script to calculate heatmaps of daily correlations
- "3 cross-correaltion analysis.R" – R script to perform the cross-correlation analysis to obtain the maximal correlation coefficient for a range of potential end days
- "4 linear models.R" – R script to fit linear models between δ13C and VPD and SWP

en:
The data consists of a collection of environmental data, tree-ring width and intra-annual δ13C measurements of tree rings of three conifer species (Pinus sylvestris, Picea abies, Abies alba), and the R scripts that were used to analyse the data. Data was collected at two pairs of north and south exposed sites in Switzerland, in the Eastern Grisons (Surava North and Surava South) and Central Valais (Buthan and Lens).
Intra-annual δ13C measurements were obtained using the laser ablation technique, which involved 10 sequential shots per ring. Shot 1 represents the δ13C value at the start of the ring, while Shot 10 corresponds to the δ13C value at the end of the ring's formation. Overall, the datasets consist of 400 profiles and 4000 isotope measurements.
Environmental data was collected at each site over decade, from 2012 to 2023. Key environmental variables include temperature, vapour pressure deficit (VPD), and soil water potential (SWP). Precipitation data was obtained from the EOBS v29.0e dataset (https://www.ecad.eu/download/ensembles/download.php) from the closest grid point. All data was aggregated on an hourly to daily scale.
In addition to environmental data, dendrometer data was used to derive the onset days, beginning of growth for each site (Onset_days.Rds). The data captures the dynamic relationship between environmental factors, such as soil and air moisture, and tree physiological responses, as reflected in δ13C variation. This dataset provides insights into the intra-seasonal interactions between environmental conditions and tree physiology. We provide the scripts for the main analyses performed in the Vitali, V. et al. 2025 article listed below, including the correlation of the isotope intra-annual time series with environmental variables.
This dataset contains all data on which the publication listed below is based.
Please cite this paper together with the citation for the datafile.

abies-alba

display_name: abies-alba

dendrochronology

display_name: dendrochronology

drought

display_name: drought

picea-abies

display_name: picea-abies

pinus-sylvestris

display_name: pinus-sylvestris

soil-water

display_name: soil-water

stable-isotopes

display_name: stable-isotopes

tree-ring

display_name: tree-ring

vpd

display_name: vpd

en: 10 years of intra-annual carbon isotopes in tree rings from 3 conifer species


maintainer: Ionuț Iosifescu Enescu

en: Bulk Data Access

en: Link to the S3 bucket where all the data resources can be downloaded in bulk

en: map preview 0.5MB

en:
The attached data are some large GIS raster files (GeoTIFFs) made with Natural Earth data. Natural Earth is a free vector and raster map data @ naturalearthdata.com. The data used for creating these large files was the "Cross Blended Hypso with Shaded Relief and Water". Data was concatenated to achieve larger and larger files. Internal pyramids were created, in order that the files can be opened easily in a GIS software such as QGIS or by a (future) GIS data visualisation module integrated in EnviDat.

Made with Natural Earth. Free vector and raster map data @ naturalearthdata.com

gis

display_name: gis

large-files

display_name: large-files

natural-earth

display_name: natural-earth

qgis

display_name: qgis

en: Large GIS raster data derived from Natural Earth Data (Cross Blended Hypso with Shaded Relief and Water)


maintainer: Jana von Freyberg

en: root-zone endmember-mixing-models stable-water-isotopes ecohydrology uncertainties plant-water-uptake review

en: Data set of MEE-20-04-264

en: The following two tables contain information about the data sources of the values reported in Table 1 and 2 in the paper “Plant and root-zone water isotopes are difficult to measure, explain, and predict: some practical recommendations for determining plant water sources” published in the journal ‘Methods in Ecology and Evolution’.

en: The following two tables contain information about the data sources of the values reported in Table 1 and 2 in the paper “Plant and root-zone water isotopes are difficult to measure, explain, and predict: some practical recommendations for determining plant water sources” published in the journal 'Methods in Ecology and Evolution'.

ecohydrology

display_name: ecohydrology

endmember-mixing-models

display_name: endmember-mixing-models

plant-water-uptake

display_name: plant-water-uptake

review

display_name: review

root-zone

display_name: root-zone

stable-water-isotopes

display_name: stable-water-isotopes

uncertainties

display_name: uncertainties

educ

en: Education, culture and sport

en: Data set of: Plant and root-zone water isotopes are difficult to measure, explain, and predict: some practical recommendations for determining plant water sources


en: bacteria wolf carcass biogeochemical-cycling yellowstone decomposition fungi carrion detritus soil-biodiversity

en:
Site	ID for different carcasses across the Yellowstone Landscape
Location	Sampling location, either under carcass or control plot
Species	Indicating whether carcass was from bison or elk
Gender	Gener of carcass; F = female, M = male, ? = unknown
Lat	Latitude
Long	Longitude
DSK	Days since kill; in days
Soil.N	Soil N concentration (%)
Soil.C	Soil C concentration (%)
Veg.C	Vegetation C concentration (%); dominant grasses sampled
Veg.N	Vegetation N concentration (%); dominant grasses sampled
Veg.CtoN	Vegetation C to N ratio; dominant grasses sampled
Soil.resp	Soil respiration (g m-2 h-1)
soil.temp	Soil temperature (°C)
Soil.moist	Soil moisture (volumentric; %)
CRR	Cotton rotting rate
bacteria.richness	Bacteria richness
bacteria.diversity	Bacteria diverstiy
fungi.richness	Fungi richness
fungi.diversity	Fungi diversity
bacteria.abundance	Bacteria abundance
fungi.abundance	Fungi abundance

en:
This dataset contains all data on which the following publication below is based.

Paper Citation:

Risch, A.C., Frossard, A., Schütz, M., Frey, B., Morris, A.W., Bump, J.K. (accepted) Effects of elk and bison carcasses on soil microbial communities and ecosystem functions in Yellowstone, USA. (accepted). Functional Ecology
doi: ...

Methods
Study area and study sites
This study was conducted in YNP’s Northern Range (NR), located in north-western Wyoming and south-western Montana, USA (~44.9163° N, 110.4169° W). The NR expands over ~1000 km2 and features long cold winters and short dry summers. Grasslands and shrublands dominate the NR that is the home of large migratory herds of bison (winter counts 2017: ~3919 individuals; Geremia, Wallen, & White, 2017) and elk (~5349 individuals) as well as their main predators, approximately five packs of wolves with a total of 33 individuals (Smith et al., 2017). As part of a long-term research program within YNP, wolf predation has been studied since their reintroduction in 1995.
For our study, we received ground-truthed coordinates of bison and elk carcasses from winter 2016/17 (November 2016 through April 2017) from the YNP Wolf Project. Between June 20 and July 1, 2017, we visited 24 carcasses in total. At five sites, we could not sample as the carcasses were no longer found. In total we located remains (hairmats, rumen content, bones, teeth) of 19 adult male and female carcasses (7 bison, 12 elk; Supplementary Table 1). Live body weights of adult bison and elk are approximately 730 kg (male bison), 450 kg (female bison), 330 kg (male elk), and 235 kg (female elk, Meagher, 1973; Quimby & Johnson, 1951).
The kills and subsequent consumption happened between 34 and 173 days prior to our sampling (hereafter “days since kill”, DSK), for which we accounted in our statistics. Note that wolves and other scavengers consumed the soft tissue of the carcasses quickly, hence, there is close to no soft tissue left for decomposition as compared to an intact body left on the soil surface. The 19 carcass sites covered the extent of YNP’s NR, with both bison and elk carcasses showing similar distributions; elevation ranged from 1703 to 2884 m a.s.l. (Supplementary Fig 1 & Supplementary Table 1). The carcasses were all located in grassland or sage-brush shrubland, with or without sparsely scattered trees, and both bison and elk carcasses showed the same distribution of DSK. At each study site, we selected a reference plot (hereafter “control”) that was of comparable size, slope aspect and vegetation to the carcass location (hereafter “carcass”). The control was at least 10 m away (Danell, Berteaux, & Brathen, 2002; Melis et al., 2007) from the carcass itself to ensure the absence of potential direct and indirect carcass effects (paired design; (Bump, Webster, et al., 2009; Bump, Peterson, et al., 2009).

Ecosystem functions and soil properties
We randomly collected 50 g of mineral soil from three locations on both control and carcass plots to a depth of 5 cm with sterile techniques and gently mixed the material to obtain a composite sample. Half the soil sample was immediately bagged in plastic bags (whirl packs), stored in a cooler with ice packs (~5 ºC), sieved (2-mm) and frozen within 4-6 hours of collection to assess soil microbial communities. For this purpose, we extracted total genomic DNA from 0.5 g soil using the PowerSoil DNA Isolation Kit (Qiagen, Hilden, Germany). DNA concentrations were measured using PicoGreen (Molecular Probes, Eugene, OR, USA). PCR amplifications of partial bacterial small-subunit ribosomal RNA genes (region V3–V4 of 16S rRNA) and fungal ribosomal internal transcribed spacers (region ITS2) were performed as described previously (Frey et al., 2016). Each sample consisting of 40 ng DNA was amplified in triplicate and pooled before purification with Agencourt AMPure XP beads (Beckman Colter, Berea, CA, USA) and quantified with the Qubit 2.0 fluorometric system (Life Technologies, Paisley, UK). Amplicons were sent to the Genome Quebec Innovation Center (Montreal, Canada) for barcoding using the Fluidigm Access Array technology and paired-end sequencing on the Illumina MiSeq v3 platform (Illumina Inc., San Diego, CA, USA).
Quality control of bacterial and fungal reads was performed using a customized pipeline (Supplementary Table 2; Frey et al., 2016). Paired-ends reads were matched with USEARCH (Edgar & Flyvbjerg, 2015), substitution errors were corrected using Bayeshammer (Nikolenko, Korobeynikov, & Alekseyev, 2013) and PCR primers were trimmed (allowing for 1 mismatch, read length >300 bp for 16S and >200 bp for ITS primers) using Cutadapt (M. Martin, 2011). Sequences were dereplicated and singleton reads removed prior to clustering into operational taxonomic units (OTUs) at 97% identity using USEARCH (Edgar, 2013). The remaining centroid sequences were tested for the presence of ribosomal signatures using Metaxa2 (Bengtsson-Palme et al., 2015) or ITSx (Bengtsson-Palme et al., 2013). Taxonomic assignments of the OTUs were obtained using Bayesian classifier (Wang, Garrity, Tiedje, & Cole, 2007) with a minimum bootstrap support of 60% implemented in mothur (Schloss et al., 2009) by querying the bacterial and fungal reads against the SILVA Release 128 (Quast et al., 2013) and UNITE 8.0 (Abarenkov et al., 2010) reference databases for 16S and ITS OTUs, respectively.
Abundances of the bacterial 16S rRNA gene and fungal ITS amplicon were determined by quantitative real-time PCR (qPCR) on an ABI7500 Fast Real-Time PCR system (Applied Biosystems, Foster City, CA, USA) as described previously (Frossard et al., 2018). The same primers (without barcodes) and cycling conditions as for the sequencing approach were used for the 16S and ITS qPCR. Three standard curves per target region were obtained using tenfold serial dilutions of plasmids generated from cloned targets (Frey, Niklaus, Kremer, Lüscher, & Zimmermann, 2011). Data were converted to represent mean copy number of targets per gram of soil (dry weight).
The other half of the soil sample was bagged in paper, dried to constant weight at 60°C, passed through a 2 mm sieve and analyzed for total C and N concentration with a CE Instruments NC 2100 soil analyzer (CE Elantech Inc., Lakewood NJ, USA). We also collected 20 mature and undamaged leaves of the dominant grass species growing on control and carcass sites, but taxa were not recorded. The plant material was dried at 60°C, finely ground till homogenized and also analyzed to obtain total C and N concentrations. Soil temperature (10 cm depth) was measured with a waterproof digital thermometer (Barnstead International, Dubuque IA, USA) at three locations each at the control and carcass site. Soil moisture (0 – 10 cm depth) was measured with time domain reflectometry (Field-Scout TDR-100; Spectrum Technologies, Plainfield IL, USA) at five randomly chosen points on control and carcass sites. We measured soil respiration at five randomly chosen points at both control and carcass sites with a PP-Systems SRC-1 soil respiration chamber (closed circuit) attached to a PP-Systems EGM-4 infrared gas analyzer (PP-Systems, Amesbury, MA, USA). For each measurement the soil chamber (15 cm high; 10 cm diameter) was tightly placed on the soil surface, after clipping plants to avoid measuring plant respiration or photosynthesis. Measurements were conducted over 120 s.
In addition, we assessed the decomposition rates of standardized OM using the cotton strip assay (Latter & Howson, 1977; Latter & Walton, 1988). Cotton cloth tensile strength loss (CTSL) is a measure of decomposition, and an index to express the combined effect of soil microclimatic, physical, chemical and biological properties on decomposition while accounting for OM quality (Latter & Walton, 1988; Risch, Jurgensen, & Frank, 2007; Withington & Sanford Jr., 2007). We placed five 20 cm wide x 13 cm long sheets of 100% unbleached cotton cloth (American Type SM 1/18’’, Warp: 34/1, Weft: 20/1, Weave plain, 29.5 picks/cm warp, 22 picks/cm weft, 237 g/m2; Daniel Jenny & Co., Switzerland;) at each carcass and control site vertically into the soil by making slits with a flat spade to a depth of 12 cm. We inserted each cloth with the spade, and then pushed the slit closed to assure tight contact with the soil. The cloths were retrieved after 18 to 27 days. After retrieval, the cloths were air-dried, remaining soil gently removed by hand, and 1.5 cm wide strips were cut at the 3.5-5.0 cm (top) and the 9-10.5 cm (bottom) soil depth. The strips were equilibrated at 50 % relative humidity and 20°C for 48 hours (climate chamber) prior to strength testing (Scanpro Awetron TH-1 tensile strength tester; AB Lorentzen and Wettre, Kista, Sweden). Cotton rotting rate (CRR) = (CTScontrol - CTSfinal/CTSfinal)1/3 * (365/t), where CTScontrol is the cotton tensile strength of a control cloth and CTSfinal the cotton tensile strength of the incubated sample, t is the incubation period in days. Control cloths were inserted into the ground and immediately retrieved to account for tensile strength loss associated with cloth insertion. We averaged the CRR of top and bottom strips for further analyses as no difference was found between the two. All sampling and cloth insertion took place between June 20 and July 1, 2017, cloths were retrieved between July 17 and 20, 2017. Soil respiration, average CRR, vegetation N concentration and vegetation C:N ratio are defined as ecosystem functions, soil C and N concentration, soil temperature and moisture as soil abiotic properties, and bacterial and fungal richness (number of taxa), diversity (Shannon) and abundance as soil biotic properties.

Statistical analyses
Univariate analyses for ecosystem functions, soil biotic and abiotic properties
We tested whether individual ecosystem functions, soil biotic and abiotic properties differed between carcass and control (“Location”), bison and elk (“Species”) and days since kill (“DSK”). For this purpose, we used linear mixed effect models (LMM, “nlme” package v 3.1 – 131.1 in R v 3.4.4; Pinheiro, Bates, DebRoy, & Sarkar, 2018; R Core Team, 2019) with Location, Species, Location x Species and DSK as fixed effects. Site was included as random effect to account for the paired design. We developed a separate model for all dependent variables. All but bacterial richness, fungal richness, fungal diversity and vegetation N concentration were natural-log transformed to meet model assumptions. For each LMM, we calculated contrasts to assess the specific comparisons we were interested in with the “lsmeans” package v 2.27-62 (Lenth & Love, 2018): 1) carcass vs control, 2) carcass bison vs control bison, and 3) carcass elk vs control elk. We also tested whether we had differences between bison and elk carcasses or the sites where bison and elk were killed and included contrasts 4) carcass bison vs carcass elk and 5) control bison vs control elk.
We calculated the log response ratio (LRR = ln[carcass/control]) to obtain carcass effects for all variables for both species separately. LRR < 0 indicates higher value at control compared to carcass, LRR > 0 indicates higher values at carcass compared control. We used LRRs for visualization and to assess spatial patterns in carcass effects across YNP. For this purpose we calculated the Moran’s I statistic for each ecosystem function, soil biotic and abiotic property based on a latitude-longitude matrix with the “moran.test” function in the “spdep” package version 1.1-3 (Bivand et al., 2019).
Multivariate analyses
Rare OTUs, defined as OTUs with a low abundance of reads, were retained in multivariate methods because they only marginally influence these analyses (Gobet, Quince, & Ramette, 2010). Bray–Curtis dissimilarity matrices were generated based on square-root-transformed matrices. We used Principal Coordinate Analyses (PCoA) to assess how soil bacterial and fungal communities differed between control and carcass of bison and elk (“vegan” package v 2.5-4, Oksanen et al., 2019). We then extracted PCoA axes scores 1 and 2 and used LMM (“nlme” package) with Location, Species, Location x Species and DSK as fixed effects. Site was, again, included as random effect. We again calculated the contrasts as described above using the “lsmeans” package. We also assessed how ecosystem functions, and soil abiotic and biotic properties were related to the soil bacteria and fungi community structure associated with bison and elk control and carcasses using the “envfit” function in the “vegan” package (Oksanen et al., 2019).
Indicator species analyses were performed using the multipatt function implemented in the “indicspecies” package version 1.7.6 with 100000 permutations (De Caceres & Jansen, 2016). This step allowed to identify OTUs that led to changes in multivariate patterns between control and carcass of both bison and elk separately (De Cáceres, Legendre, & Moretti, 2010). The multipatt function uses a point biserial correlation coefficient statistical test. Indicator OTUs were defined as bacterial and fungal OTUs with more than 50 sequences, i.e., removing rare taxa and taxa with low abundances containing little indicator information (Rime et al., 2015) and that were significantly correlated with Location (p < 0.05, correlation coefficient > 0.3). A heatmap of these OTUs were generated with the vegan and ggplot2 packages. The indicator analyses were performed in R version 3.3.3 (R Core Team, 2017).

References
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Risch, A. C., Jurgensen, M. F., & Frank, D. A. (2007). Effects of grazing and soil micro-climate on decomposition rates in a spatio-temporally heterogeneous grassland. Plant and Soil, 298(1–2), 191–201. doi:10.1007/s11104-007-9354-x
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Please cite this paper together with the citation for the datafile.

bacteria

display_name: bacteria

biogeochemical-cycling

display_name: biogeochemical-cycling

carcass

display_name: carcass

carrion

display_name: carrion

decomposition

display_name: decomposition

detritus

display_name: detritus

fungi

display_name: fungi

soil-biodiversity

display_name: soil-biodiversity

wolf

display_name: wolf

yellowstone

display_name: yellowstone

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Elk and bison carcasses in Yellowstone, USA


en: snow microstructure compression-experiments snow-mechanics x-ray-tomography

en: Snowmicroquakes Data

en: Compression experiments, X-ray images and simulation data with supplemented README file

en:
When snow is compressed with a certain speed, micro-snowquakes are triggered in the porous structure of bonded crystals. The present dataset covers uniaxial compression experiments of snow at different strain rates and concurrent X-ray tomography imaging documenting this feature.

The experiments were conducted in a micro-compression stage operated in the X-ray tomography scanner in the SLF cold laboratory. The dataset comprises the compression force data of 17 compression experiments, the 3D image data from 4 X-ray tomography scans and the results of numerical simulations.

compression-experiments

display_name: compression-experiments

microstructure

display_name: microstructure

snow

display_name: snow

snow-mechanics

display_name: snow-mechanics

x-ray-tomography

display_name: x-ray-tomography

en: Compressive stick slip and snow-micro-quakes


automatic-detection-of-avalanches

maintainer: Matthias Heck

title_for_slug: automatic-detection-of-avalanches

en: seismic avalanche-activity hidden-markov-model snow monitoring

en: Results and Scripts

en: This zip package contains the classification results, coherence results, reference data set, python scripts used for the classification and the start and end times for the pre-processed continuous seismic data. A further readme file is also include for more detailed information.

en: This dataset contains the results obtained by an automatic classification using hidden Markov models of a continuous seismic dataset. To avoid long computational times, we reduced the seismic data using pre-processing step. The start and end times of the windows used for the classification are also included in this dataset. Furthermore, an avalanche reference data set is included and the python scripts used to perform the processing steps and the classification.

avalanche-activity

display_name: avalanche-activity

hidden-markov-model

display_name: hidden-markov-model

monitoring

display_name: monitoring

seismic

display_name: seismic

en: Automatic detection of avalanches


en: air-temperature last-glacial-maximum glaciers paleo-climate orography precipitation

en: Technical documentation

en: Technical documentation containing file metadata and variable descriptions.

en: Data Access

en:
High resolution, downscaled climate model data are used in a wide variety of applications in environmental sciences. Here we present the CHELSA-TraCE21k downscaling algorithm to create global monthly climatologies for temperature and precipitation at 30 arcsec spatial resolution in 100 year time steps for the last 21,000 years. Paleo orography at high spatial resolution and at each timestep is created by combining high resolution information on glacial cover from current and Last Glacial Maximum (LGM) glacier databases with the interpolation of a dynamic ice sheet model (ICE6G) and a coupling to mean annual temperatures from CCSM3-TraCE21k. Based on the reconstructed paleo orography, mean annual temperature and precipitation was downscaled using the CHELSA V1.2 algorithm.

The data is published under a Creative Commons Attribution 2.0 Generic (CC BY 2.0) license.

air-temperature

display_name: air-temperature

glaciers

display_name: glaciers

last-glacial-maximum

display_name: last-glacial-maximum

orography

display_name: orography

paleo-climate

display_name: paleo-climate

precipitation

display_name: precipitation

educ

en: Education, culture and sport

en: CHELSA-TraCE21k: Downscaled transient temperature and precipitation data since the last glacial maximum


maintainer: Giulia Francesca Azzurra Donati

en: ecological-corridors urban-spatial-planning circuit-theory integrated-modelling biodiversity human-dominated-landscapes

en: Amphibian species specific landscape resistance maps.

en: For each amphibian species we used the weighted average Ensemble model suitability map and converted it to a resistance map using an exponential decay function following (Duflot et al., 2018) using the species-specific mpa threshold previously computed (Preau et al., 2020). The function assigns a resistance value of 1,000 when habitat suitability equals zero, and a value of one when habitat suitability is greater than or equal to the binarization threshold. The exponential shape strengthens the barrier effect of less favorable areas.

en: Amphibian whole life cycle predictors - 10m resolution

en:
Amphibian whole life cycle predictors include 6 variable types:
(1)	Topographic – slope [°]: derived from the Swiss Topographical Landscape model (swissTLM 3D 2015) at 2 m resolution (elevation uncertainty ± 0.5m) and, subsequently, aggregated to a median value;
(2)	Hydrologic: two predictors including nearest distance to water [m] (all water-related objects and rasterized lotic, lentic and reedbeds from the regional cadastral maps – AV: Daten der Amtliche Vermessung) and runoff coefficient [C] (between 0 and 1 relating amount of runoff to amount of precipitation, mapped AV: Daten der Amtliche Vermessung data against literature values for different land covers);
(3)	Edaphic – soil moisture variability (not available): can gathered from the spatial modelling of Ecological Indicator Values in Switzerland (Descombes et al., 2020) and resampled from 100m to 10m;
(4)	Vegetation: we calculated the median and standard deviation of the Normalized Difference Vegetation Index (NDVI) from all available cloud free Sentinel-2 pixels available between April and October for the years 2016 to 2019 (Drusch et al., 2012) and the median vegetation height [m] (not available) can gathered from Ginzler and Hobi (2015);
(5)	Land-use derived: includes three predictors, grassland density [grassland/cell] (not available) - can be gathered from Pazur et al. (2021), total grasslands area evaluated using a spatial weight matrix and a 250m neighborhood radius around each cell; urbanization [buildings/cell] – average building density for a 250m neighborhood around each cell based on the AV: Daten der Amtliche Vermessung ; and traffic intensity [vehicles/day] – average daily vehicle count (Nationales Personenverkehrsmodells);
(6)	Movement-ecology related: includes three predictors of proximity – nearest forest distance [m]; nearest rock-gravel and sandy area (RGS) distance [m] and nearest road distance [m] (considering any road type) – all calculated based on the AV: Daten der Amtliche Vermessung maps.

en: Amphibian monitoring data

en: Processed amphibian occurrence data (2017-2019) in the cantons of Aargau and Zürich. The dataset includes information for the following species: _Alytes obstetricans_,_Bombina variegata_, _Bufo bufo_, _Hyla arborea_, _Ichtyosaura alpestris_, _Lissotriton helveticus_, _Lissotriton vulgaris_, _Rana temporaria_, _Salamandra salamandra_, and _Triturus cristatus_.

en: Binarized "green" and "grey" landcover data (Cantons of Aargau and Zürich)

en: "Green" landcover refers to lawns and vegetated urban surfaces such as, for example private gardens, public parks, cemeteries, green stripes along roadsides, etc. While "grey" landcover refers to impervious grounds such as roads, troittoirs, other impervious. Binarized maps, 30x30m resolution.

en: Amphibian breeding sites of national importance - cantons of Aargau and Zürich

en: Amphibian breeding sites of national importance (focal nodes) in the cantons of Aargau and Zürich, 30x30 m resolution, binarised ascii format.

en: The data includes (1) amphibian occurrence data (2017-2019) for ten species across the cantons of Aargau and Zürich gathered from the Coordination Center for the Protection of Amphibians and Reptiles of Switzerland (http://www.karch.ch), (2) amphibian whole-life cycle environmental predictors (i.e. topographic, hydrologic, edaphic, vegetation, land-use derived, movement-ecology related), and (3) local urban "green" and "grey" landcover data which can be used to identify opportunities for Blue-Green Infrastructure (through green or grey transitions) in support of regional landscape connectivity.

biodiversity

display_name: biodiversity

circuit-theory

display_name: circuit-theory

ecological-corridors

display_name: ecological-corridors

human-dominated-landscapes

display_name: human-dominated-landscapes

integrated-modelling

display_name: integrated-modelling

urban-spatial-planning

display_name: urban-spatial-planning

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Amphibian and urban-rural landscape data Swiss Lowlands


en: permafrost collections swiss-alps biobank conservation plastisphere glaciers biodiversity bacteria active-layer fungi extreme-habitat arctic

en: Complete collection of bacterial and fungal isolates from Permafrost, active layer and glaciers in Switzerland, Svalbard, northern Greenland and Russia.

en:
The cold habitats of the Swiss Alps and the Arctic are undergoing change and are at risk of disappearing completely or partially in the future. Along with them, a poorly known diversity of microorganisms that have adapted to life in these supposedly hostile places. By cryopreserving microorganisms from these habitats, some of today's biodiversity can be preserved in biobanks.
The collection contains cryopreserved bacteria and fungi isolated from permafrost and active layer of Muot da Barba Peider and Val Lavirun, from the glacier forefield and glacier toe of the Damma glacier, from active layer in northern Greenland and from plastic waste in Svalbard, as well as isolates from plastic incubations in Muot da Barba Peider, northern Greenland and arctic Russian soils.

Project overview: https://www.wsl.ch/en/projects/life-at-chilly-temperatures-a-collection-of-microorganisms-from-extreme-habitats/

active-layer

display_name: active-layer

arctic

display_name: arctic

bacteria

display_name: bacteria

biobank

display_name: biobank

collections

display_name: collections

conservation

display_name: conservation

extreme-habitat

display_name: extreme-habitat

fungi

display_name: fungi

permafrost

display_name: permafrost

plastisphere

display_name: plastisphere

swiss-alps

display_name: swiss-alps

educ

en: Education, culture and sport

en: Life at chilly temperatures - A collection of microorganisms from extreme habitats


en: dry-snow-avalanche numerical-simulations crack-propagation crack-speed weak-layer field-data

en: Video analyze data cross slope

en: Field data PST >30deg

en: Field data PST <30deg

format: OCTET

en: MPM data flat terrain

en: DEM data flat terrain

en: Video analyze data up-slope

en: MPM data slope terrain

en: DAM data slope terrain

en:
Compilation of normalized crack-propagation speeds (expressed as a fraction of the slab shear-wave speed).

The dataset contains crack-propagation speeds from DEM simulations (79 flat and 6 tilted; Bobillier et al., 2024), MPM simulations (48 flat and 191 tilted; Trottet et al., 2022), and field measurements: PSTs (222 data points, including 192 from low-angle terrain < 30°; van Herwijnen et al., 2016) and avalanche-video analyses (6 cross-slope and 5 down-slope speeds; Trottet et al., 2022).

The dataset also includes Python scripts that generate the relative-frequency distribution of the compiled, normalized crack-propagation speeds.

Bobillier, G., Bergfeld, B., Dual, J., Gaume, J., van Herwijnen, A., 55 and Schweizer, J.: Numerical investigation of crack propagation regimes in snow fracture experiments, https://doi.org/10.1007/s10035-024-01423-5 2024

Trottet, B., Simenhois, R., Bobillier, G., Bergfeld, B., van Herwijnen, A., Jiang, C. F. F., and Gaume, J.: Transi- 55 tion from sub-Rayleigh anticrack to supershear crack propagation in snow avalanches, Nat. Phys., 18, 1094–1098, https://doi.org/10.1038/s41567-022-01662-4, 2022.

van Herwijnen, A., Gaume, J., Bair, E. H., Reuter, B., Birkeland, K. W., and Schweizer, J.: Estimating the effective elastic modulus and specific fracture energy of snowpack layers from field experiments, J. Glaciol., 62, 997–1007, https://doi.org/10.1017/jog.2016.90, 2016a.

crack-propagation

display_name: crack-propagation

crack-speed

display_name: crack-speed

dry-snow-avalanche

display_name: dry-snow-avalanche

field-data

display_name: field-data

numerical-simulations

display_name: numerical-simulations

weak-layer

display_name: weak-layer

en: Compilation of normalized  crack propagation speeds


maintainer: Henning Löwe

en: angle-of-repose fast-sintering discrete-element-modelling grain-shape granular-snow

mimetype: text/plain

en: Angle of repose and 3D CT images

en:
5 Snow types were examined and glass beads as a cohesion-less reference, named as follows:

RG: rounded grains (sieved with 0.7 - 1.4 mm)

FC: faceted grains (1.4 - 2 mm)

FCS: small faceted grains (0.7 - 1.4 mm)

IB: ice beads (4 mm)

IBS: small ice beads (2 - 2.2 mm)

GB: glass beads(2 mm)

en:
Angle of repose experiments were performed with different snow types at temperatures between -2 and -40°C. They were used to examine granular snow dynamics on the grain-scale with focus on the role of grain shape and cohesion. The angle of repose was observed by sieving snow onto a round, freestanding base until a stationary heap was formed.

This dataset consists of 1) the images of the experimental heaps that were taken to determine the angle of repose, 2) one binary 3D micro computed tomography image of each snow type. The CT images were taken with the SLF micro-CT40 to characterize snow properties and grain shape.

The experiments with natural snow types (rounded and faceted grains) and spherical model snow allowed for an examination of the differences in granular properties between natural grain shapes and spherical particles in view of Discrete Element Modelling. With the chosen temperatures, the effect of sintering could be observed that increases the angle of repose with increasing temperature.

angle-of-repose

display_name: angle-of-repose

discrete-element-modelling

display_name: discrete-element-modelling

fast-sintering

display_name: fast-sintering

grain-shape

display_name: grain-shape

granular-snow

display_name: granular-snow

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Angle of repose experiments with natural and spherical snow


maintainer: Esther R. Frei

en: swiss-alps treeline larix-decidua forest climate-change stillberg seedling-recruitment g-tree picea-abies

en: climate data G-TREE experiment, Davos, Switzerland

en:
 Background information
Climate change-induced range expansion of treeline populations depends on their successful recruitment, which requires dispersal of viable seeds followed by successful establishment of individual propagules. The Global Treeline Range Expansion Experiment (G-TREE) is a global initiative involving researchers from Europe, North America, Australia and New Zealand (Brown et al., 2013). At 15 alpine and Arctic treeline sites worldwide the mechanisms determining the elevational and latitudinal distribution of tree populations are studied using a standardized experimental approach. In summer 2013, a multifactorial seedling recruitment experiment has been established at the Stillberg ecological treeline research site. The aim of this experiment, is to quantify the effect of multiple abiotic and biotic drivers on emergence, survival, and growth of *Larix decidua* and *Picea abies* seedlings in replicated plots along an elevation gradient with three sites below (1930 m a.s.l.), at (2090 m a.s.l.), and above treeline (2410 m a.s.l.; Frei et al., 2018). All plots have been surveyed annually to count seedlings and to measure their total height. Additional environmental factors, such as soil temperature, have been recorded.

 Experimental design
The Stillberg research area is located in the Eastern Swiss Alps near Davos, Switzerland. The site has been used for several long-term monitoring as well as experimental studies for the last four decades. Our G-TREE experiment consists of a lowest site located in a subalpine Larch-Spruce forest (*Larici-Picetum*) dominated by *Larix decidua* and *Picea abies* (1930 m a.s.l.), a transition zone site dominated by alpine shrubs (2100 m a.s.l.), and an uppermost site in an alpine meadow with some dwarf shrubs (2390 m a.s.l.). The three experimental sites were set up following the standard protocol of the global G-TREE initiative (Brown et al., 2013). In a split-plot design, 20 plots (224 cm × 45 cm) were established at each site, which were randomly assigned to the 2 × 2 treatment combinations of the main factors seeding and scarification (i.e. seeding and scarification, seeding only, scarification only, and full control), resulting in five replications per main treatment combination. Each plot was divided into 16 split-plots (22.5 cm × 28 cm), to which treatment combinations of four additional two-level factors species (larch and spruce), provenance (low- and high-elevation), herbivore exclosure (with and without exclosure), and seeding year (2013, 2014) were randomly assigned, which resulted in a total of 960 split-plots (Details see Frei et al. 2018).

 Data description
All plots have been surveyed annually to count seedlings and to measure their total height. Seedling height was assessed with a hand ruler as the total length from the original emerging point to the apical meristem (Details see Frei et al. 2018). Additionally, soil temperature at each site, has been continuously recorded since 2013. Here, we present data from eight years (2013–2021).

climate-change

display_name: climate-change

forest

display_name: forest

g-tree

display_name: g-tree

larix-decidua

display_name: larix-decidua

picea-abies

display_name: picea-abies

seedling-recruitment

display_name: seedling-recruitment

stillberg

display_name: stillberg

treeline

display_name: treeline

educ

en: Education, culture and sport

en: G-TREE: Global Treeline Range Expansion Experiment Davos, Switzerland