en: functional-diversity beta-diversity spatial-factors environmental-factors community-assembly taxonomic-diversity water-filled-tree-holes metacommunity

en: This dataset provides the geographic coordinates (latitude and longitude) of each sampled water-filled tree hole (WTH) for the Brazilian forest plot.

en: This dataset contains trait information used to characterize the macroinvertebrates in our study, for the Indian forest plot. The dataset includes seven trait groups: aquatic developmental stage, maximum body size, locomotion, dispersal mode, respiration mode, feeding group, and cohort production interval. These trait groups are further divided into 32 distinct categories.

en: Code to do the analysis and figures of the paper.

en: This dataset includes physical and environmental characteristics of water-filled tree holes (WTHs), such as water depth, height, opening size, hole origin and orientation, circumference at breast height, WTH type, and water volume. It also contains physico-chemical parameters, nutrient concentrations (ammonium, nitrogen, phosphate, sulfate, chloride), CDOM, Chlorophyll-A, turbidity, and dry organic matter (FPOM, CPOM, total).

en: This dataset contains trait information used to characterize the macroinvertebrates in our study, for the Brazilian forest plot. The dataset includes seven trait groups: aquatic developmental stage, maximum body size, locomotion, dispersal mode, respiration mode, feeding group, and cohort production interval. These trait groups are further divided into 32 distinct categories.

en: This dataset provides the geographic coordinates (latitude and longitude) of each sampled water-filled tree hole (WTH) for the French forest plot.

en: This dataset provides the geographic coordinates (latitude and longitude) of each sampled water-filled tree hole (WTH) for the Indian forest plot.

en: This dataset contains trait information used to characterize the macroinvertebrates in our study, for the French forest plot. The dataset includes seven trait groups: aquatic developmental stage, maximum body size, locomotion, dispersal mode, respiration mode, feeding group, and cohort production interval. These trait groups are further divided into 32 distinct categories.

en: This dataset includes results from variation partitioning analysis used to assess the relative contributions of environmental and spatial factors to taxonomic and functional β-diversity and their components across biogeographic regions. It contains site-level values for pure and shared effects of predictors. Used to generate Fig_2.

en: This dataset contains values of taxonomic and functional β-diversity for each study site, along with their respective components: species richness difference vs. turnover (taxonomic), and functional richness difference vs. functional turnover (functional). Used to generate Fig. 1.

en: This Excel file contains metadata that provides detailed information about all other files included here. It describes the ten accompanying datasets, outlining the type of data each contains, the variables used, their descriptions, and the units of measurement (where applicable).

en: This dataset describes the animal community composition sampled from 35 water-filled tree holes (WTHs) per site. It includes abundance and taxonomic identification (to morphospecies level) of aquatic macroinvertebrates and Chordata.

en: These datasets and code support research on the community assemblage of aquatic macroinvertebrates in ephemeral microhabitats, specifically water-filled tree holes (WTH), in three biogeographically and climatically distinct old-growth forests: Temperate-Mediterranean (France), Neotropical (Brazil) and Palaeotropical (India). By integrating standardised biological sampling, detailed environmental measurements and spatial analysis, the dataset allows for an in-depth examination of how local habitat conditions and spatial configuration influence taxonomic and functional beta-diversity patterns. The data capture the variation in species composition and ecological traits in 35 WTH per forest site and are particularly important for understanding how environmental filtering and spatial processes shape beta-diversity in natural forest ecosystems.

beta-diversity

display_name: beta-diversity

community-assembly

display_name: community-assembly

environmental-factors

display_name: environmental-factors

functional-diversity

display_name: functional-diversity

metacommunity

display_name: metacommunity

spatial-factors

display_name: spatial-factors

taxonomic-diversity

display_name: taxonomic-diversity

water-filled-tree-holes

display_name: water-filled-tree-holes

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Spatial factors shape taxonomic and functional beta-diversity in water-filled tree holes in different biogeographical regions


maintainer: EnviDat Support

en: extreme-events bark-beetles drought compound-events protective-effect forest-fire protection-forest natural-hazards

state: active

type: dataset

media_type: application/pdf

en: Factsheet summarising the key results of the study (in Italian).

format: PDF

en:
This file contains the anonymous answers to the survey for the case study in the protective forest, Val Mesolcina, GR, Switzerland within the BAFU Project "Wenn Risiken kumulieren - Analyse und Umgang mit unerwarteten Ereignissen und kombinierten Risiken".
The survey consists of two parts, based on different concepts: "top-down" and "bottom-up". Answers for both concepts are available in two different worksheets within the Excel file.

format: XLS

en: Factsheet summarising the key results of the study (in German).

mimetype: application/pdf

en: Factsheet summarising the key results of the study (in French).

en: Factsheet summarising the methods used in this project (in German).

en: Conclusions and recommendations of the project (in German).

en: Description of the study site, extreme event (trigger event) and informations about the survey.

en:
This dataset contains the results of a case study analysing the potential impacts of a compound meteorological extreme event on the protective forest in the Val Mesolcina. These impacts were assessed in an experts survey. 29 Experts from practice, administration and science estimated the probabilities for a loss of the protective function due to a drought-related compound extreme event based on different hazard scenarios. The experts not only assessed these probabilities but also provided estimates about the reliability of the scenarios, other socio-economic consequences and options for adaptation.
This dataset contains the following information:
- Table with all (anonymised) answers from the survey
- Factsheets summarising the results and methods in German, French and Italian
- A detailed description of the study site and survey instructions
- Link to the project website wit illustrations for each individual question of the survey

bark-beetles

display_name: bark-beetles

compound-events

display_name: compound-events

drought

display_name: drought

extreme-events

display_name: extreme-events

forest-fire

display_name: forest-fire

natural-hazards

display_name: natural-hazards

protection-forest

display_name: protection-forest

protective-effect

display_name: protective-effect

educ

fr: Éducation, culture et sport

de: Bildung, Kultur und Sport

it: Istruzione, cultura e sport

fr: EnviDat: le portail de données environnementales

de: EnviDat: das Umwelt-Datenportal

it: EnviDat: il portale dei dati ambientali

fr: EnviDat est le portail de données du WSL; il offre un accès uniformisé et réglementé aux données de surveillance et de recherche en matière d’environnement. Ce portail est capable d’héberger et de publier des ensembles de données précieuses et uniques, qui sont partagées aux quatre coins de la planète. Ce faisant, EnviDat favorise la recherche et contribue à l’avancement des sciences environnementales.

de: EnviDat ist das Datenportal der WSL für einen einheitlichen und verwalteten Zugang zu Umweltdaten aus Monitoring- und Forschungsprojekten. Auf dem Portal können Datensätze gehostet und veröffentlicht werden. Durch die weltweite Bereitstellung einzigartiger und wertvoller Datensätze leistet EnviDat einen Beitrag zur Forschung im Bereich der Umweltwissenschaften.

it: EnviDat è il portale dati del WSL che fornisce un accesso unificato e gestito ai dati di monitoraggio ambientale e di ricerca. Il portale ha la capacità di ospitare e pubblicare serie di dati preziosi e unici che vengono condivisi in tutto il mondo. Così facendo, EnviDat promuove la ricerca e contribuisce al progresso della scienza ambientale.

political_level: other

wsl

capacity: public

type: organization

approval_status: approved

key: guid

key: uri

value: Envidat Harvester

en: Experts survey protective forest and combined extremes in Val Mesolcina


en: environmental-dna crispr-cas biodiversity-monitoring threatened-species qpcr crispr-dx edna field-based-protocol african-manatee

media_type: text/plain

en: Description of project and folders and files

format: TXT

media_type: application/zip

format: ZIP

en: File containing overview of site names and extract number (field-based or lab-based extraction). The extract_number_field_based corresponds to the identically called column in CRISPR_field_based_classifications.csv file in the data folder, as the extract_number_lab_based to the column in the file CRISPR_lab_based_classifications.csv file and the qPCR_Cp_2nd_derivative.csv file (also in the data folder). The file includes the GPS coordinates of the sampling location (transect start point).

en:
Folder containing the data files with Cp values (qPCR) and the CRISPR-Dx classifications. CRISPR_field_based_classifications.csv file contains the classifications per pool per extract (0: no detection, 1: detection) for the African manatee (Trichechus senegalensis).
CRISPR_lab_based_classifications.csv file contains the classifications per pool per extract (0: no detection, 1: detection).
qPCR_Cp_2nd_derivative.csv file contains the Cp value of the 8 replicates of each extract.

en:
Data associated to the publication "Rapid field-based detection of a threatened and elusive species with environmental DNA and CRISPR-Dx"

 Authors:

Flurin Leugger, Martina Lüthi, Michel Schmidlin, Zacharias Kontarakis and Loïc Pellissier

 Contact:

flurinleugger@gmail.com
loic.pellissier@usys.ethz.ch

 Project description:

We collected eDNA samples in the Conkouati-Douli National Park in the Republic of Congo in 2023 in collaboration with Beauval Nature and HELP Congo. We analyzed the samples on site in the national park using CRISPR-Dx assays to detect the African manatee (*Trichechus senegalensis*). Additionally, we transported the remaining samples (buffer) to Switzerland and used a high-sensitivity protocol with CRISPR-Dx assays and a qPCR assay to verify the field-based detections. The qPCR of Hunter et al. (2018) detects the genus manatee (Trichechus). See publication for more details (doi will be added after publication).

 Folders:

 lateral_flow_tests_images\:

Images of the lateral flow tests used to analyze the eDNA extracts in the national park. File names correspond to the site names. At each site, we took two filter replicates. We ran 8 PCRs per filter/extract and pooled two PCRs together, resulting in 4 CRISPR-Dx assays per extract. The EVE number on top of the tests indicates the environmental extract number we use to track the extracts in our data base. It corresponds to the extract_number_field_based in the metadata and data folder. The negative extraction control with the strongest "band" was placed right to the eDNA extract on each image (labelled hand written with NC x.y).

 metadata\:

File containing overview of site names and extract number (field-based or lab-based extraction). The extract_number_field_based corresponds to the identically called column in CRISPR_field_based_classifications.csv file, as the extract_number_lab_based to the column in the file CRISPR_lab_based_classifications.csv file and the qPCR_Cp_2nd_derivative.csv file. The file includes the GPS coordinates of the sampling location (transect start point).

 data\:

Folder containing the files with Cp values (qPCR) and the CRISPR-Dx classifications. CRISPR_field_based_classifications.csv file contains the classifications per pool per extract (0: no detection, 1: detection) for the African manatee (Trichechus senegalensis).
CRISPR_lab_based_classifications.csv file contains the classifications per pool per extract (0: no detection, 1: detection).
qPCR_Cp_2nd_derivative.csv file contains the Cp value of the 8 replicates of each extract.

african-manatee

display_name: african-manatee

biodiversity-monitoring

display_name: biodiversity-monitoring

crispr-cas

display_name: crispr-cas

crispr-dx

display_name: crispr-dx

edna

display_name: edna

environmental-dna

display_name: environmental-dna

field-based-protocol

display_name: field-based-protocol

qpcr

display_name: qpcr

threatened-species

display_name: threatened-species

en: Field-based eDNA analysis to detect the threatened and elusive African manatee


maintainer: Christoph Marty

en: water-cycle hydrology snowfall snow climate-change-impacts

en: DORA Persistent URL

media_type: text/html

format: HTML

en: Synthesis report chapter

en:
This report was prepared as one of the synthesis report chapters of the Hydro-CH2018 project of the Federal Office for the Environment (FOEN). An important feature of snow cover is the fact that its volume and duration is subject to large year-to-year fluctuations. As frozen precipitation, snow cover is nothing other than a natural water reservoir that delays precipitation to runoff and is thus of outstanding importance for the seasonal water balance in Switzerland. Over a whole year, approximately 40% (22 km3) of the annual runoff currently comes from snow melting and only 1% from glacier melting. Typically, the snow cover in the Alpine region builds up over the autumn and winter months, reaches its maximum between February and May, depending on the altitude, and dominates the runoff processes during melting in the following spring and summer months.
Due to the great dependence on minus temperatures and precipitation, the snow cover reacts sensitively to temperatures above 0° Celsius and more or less precipitation. Due to climate change and the associated warming, the proportion of precipitation that falls as snow decreases measurably. In addition to this reduction in snowfall, the warmer temperatures also cause the snow cover to melt more quickly. The decline in snowfall has so far mainly affected lower altitudes, where winter temperatures often reach positive levels.
As climate change progresses, this trend is likely to continue and above all affect higher zones. Even at higher altitudes, the snow cover will then start later, melt away earlier and is increasingly no longer permanently present. This development will also have an effect on the water bodies. Today nival regimes, i.e. regimes shaped by snow, are shifting towards pluvial regimes, i.e. regimes dominated by rain. Overall, winter runoff increases, summer runoff decreases. By the end of the century, the proportion of runoff from snowmelt will decrease throughout Switzerland, albeit to a lesser extent than the proportion from glacier melt.

climate-change-impacts

display_name: climate-change-impacts

hydrology

display_name: hydrology

snow

display_name: snow

snowfall

display_name: snowfall

water-cycle

display_name: water-cycle

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Snow and the water cycle in a changing climate


en: spatial-information strategic-plans development-priorities europe urban-region

en: Planning intentios

format: SERVICE

en:
The present dataset is part of the report titled Gradinaru S.R., Hersperger A.M., Schmid F. (2021). Deriving Planning Intentions from written planning documents. Report on CONCUR Project- From plans to land change: how strategic spatial planning contributes to the development of urban regions.
The data corresponds to the data collected as part of the DPI Method for deriving all PIs contained in a plan (open coding) as detailed in section 4 of the report. The method involved reading the plans to break down of information in meaningful discrete “incidents” or planning intentions. To identify the planning intentions, the starting points were represented by a) the structuring of the plans in chapters and sub chapters and b) the themes that the plans addressed. Thus, the collected information was not grouped according to pre-defined categories of planning intentions, but rather put together as a list of intentions as revealed by each plan. As a result, we provide, for each case study, a document (named [Urban region name] PI as defined in the plan) which contains:
	Date when the information was filled in.
	Name of the urban region and analysed strategic spatial plan .
	A list of all planning intentions contained in a plan, with each PI being addresses as follows:
	Name of PI as it appears in the plan
	Translated name of the PI (i.e. short name for easy understanding of the meaning)
	Explanation regarding the meaning of the PI
	Why the PI is considered a priority for the urban region
	Spatial information on the PI (text and cartographic representations).
In total, 14 documents are available, one for each case study. Documents contain up to 20 pages of information extracted from the plans together with explanations and notes taken during plan reading.

development-priorities

display_name: development-priorities

europe

display_name: europe

spatial-information

display_name: spatial-information

strategic-plans

display_name: strategic-plans

urban-region

display_name: urban-region

en: Planning intentions in strategic plans of European urban regions


maintainer: Marco Moretti

en: switzerland predictive-modelling community-indices hymenoptera wild-bee functional-diversity protected-areas urbanization anthophila beta-diversity resource-availability biodiversity elevation-gradient climate

en: Spatial environmental predictors and responses

en:
The .zip file contains the rasters of the environmental predictors and the predicted responses:
-  **Environmental predictors.**:
  -  The raster on the climate contains the PCA axes on the CHELSA variables.
  -  The raster on resource availability contains the PCA axes on plant communities
  -  The raster on land-use contains the land-use composition at 2500 m.
  -  The raster on beekeeping intensity contains thedensity of hives within 2500 m
-  **Responses**:
- The predicted responses (alpha and beta taxonomic and functional metrics and the traits) without masking the waterbodies, used in the analyses (Diversity_stack_revised_Selected_descriptors.tif). It contains a stack of 20 responses in this order: "belowgound", "cleptoparasite","FDis", "feeding_specialization", "FEve", "FRic", "InvSimpson", "ITD","LCBD_fun" ,"LCBD_taxo","phenoduration", "phenostart", "Rao", "Richness", "Shannon", "Simpson","solitary", "TED", "tong_length", "TOP". "FEve", "FRic", "InvSimpson","Rao", "Simpson" were not included in the linked paper.
- The predicted responses (alpha and beta taxonomic and functional metrics and the traits) masking the waterbodies (masked.stack.all.diversity.tiff). It includes a stack of 15 responses (excludes "FEve", "FRic", "InvSimpson","Rao", "Simpson").

en: Protected areas

en: Protected areas considered, divided in three groups and rasters: protected areas sensu stricto, protected areas sensu lato and all protected areas

en: Variable importance, model evaluation, partial dependence plots

en: The compress file containes a set of txt files with the variable importance, the model evaluation metrics and the partial dependence plots of each of the responses used (alpha and beta taxonomic and functional diversity metrics; community weighted means of 8 functional traits)

en: Wild bee trait data

en: Text file containing the scores of the 8 used traits. The data originates from the European trait database (compiler: Stuart Roberts; pollinator loss module of the EU- FP6 ALARM project).

en: Elevation and waterbodies

en: Zip file containing two rasters: the digital elevation model of Switzerland and the waterbodies of Switzerland.

en: Taxonomic and functional metrics in the community plots

en:
Response data used for the modeling.
Lat: latitude community plot
Lon: longitude community plot
Richness: species richness
Shannon: Shannon diversity index
FDis: functional dispersion
TOP: Trait Onion Peeling (functional richness)
TED: Trait Even Distribution (functional evenness)
LCBD_taxo: local community contributions to taxonomic beta diversity
LCBD_fun: local community contributions to functional beta diversity
ITD: community weighted means inter-tegula distance
feeding_specialization: community weighted means feeding specialization
tong_length: community weighted means tongue length
phenostart: community weighted means start of the phenology
phenoduration: community weighted means duration of the phenoloy
cleptoparasite: community weighted means cleptoparasites
belowgound: community weighted means proportion belowground
solitary: community weighted means proportion solitary

en:
Raw data supporting the paper "Countrywide wild bee taxonomic and functional diversity reveal a spatial mismatch between alpha and beta-diversity facets across multiple ecological gradients". It contains taxonomic and functional metrics in 3343 community-plots distributed across Switzerland. The calculated metrics are:
- Alpha taxonomic community metrics: species richness and Shannon diversity
- Alpha functional community metrics: Functional richness (using the Trait Onion Peeling index, TOP), functional eveness (using the Trait Even Distribution index, TED) and the functional dispersion.
- Community weighted means of 8 functional traits
- The local community contributions on the functional and taxonomic beta diversity (LCBD).

The dataset also includes the following:
- The used predictors to model the spatial distribution of the community metrics (climate PCA, vegetation PCA, land-use metrics, beekeeping intensity).
-The three types of protected areas, defined according to the protective measures.
- The model evaluation, variable importance and partial dependece data.

anthophila

display_name: anthophila

beta-diversity

display_name: beta-diversity

biodiversity

display_name: biodiversity

climate

display_name: climate

community-indices

display_name: community-indices

elevation-gradient

display_name: elevation-gradient

functional-diversity

display_name: functional-diversity

hymenoptera

display_name: hymenoptera

predictive-modelling

display_name: predictive-modelling

protected-areas

display_name: protected-areas

resource-availability

display_name: resource-availability

switzerland

display_name: switzerland

urbanization

display_name: urbanization

wild-bee

display_name: wild-bee

en: Data on wild bee taxonomic and functional diversity in Switzerland


en: meteo climate-change meteorology swiss-forest-lab wind-speed par temperature long-term precipitation relative-humidity

en: Site photo of the forest station (SCB)

en: Site photo of the forest station from below (viewing upwards the slope).

en: Field station data (SCF)

media_type: text/csv

en: Data file.

format: CSV

mimetype: text/csv

en: Forest station data (SCB)

en: Data plot of the forest station (SCB)

en: Data overview for air temperature, relative humidity, precipitation, PAR, wind speed.

en: Site aerial photo (Schänis)

en: Site aerial photo from both Schänis stations. Source: Google. 2016. Site aerial photo from both Schänis stations. Retrieved November 11, 2016, from https://www.google.ch/maps

en: Data plot of the field station (SCF)

en: Further details on the data repository

en: Meta data documentation.

en: Site photo of the field station (SCF)

en: Site photo of the field station from above (viewing downwards the slope).

en: High quality meteorological data are needed for long-term forest ecosystem research, particularly in the light of global change. The long-term data series published here comprises almost 20 years of measurements for two meteorological stations in Schänis in Switzerland where one station is located within a natural mixed forest stand (SCB) with European beech (_Fagus sylvatica_; 130-150 yrs), European silver fir (_Abies alba_; 130-150 yrs) and European ash (_Fraxinus excelsior_; 130-150 yrs) as dominant tree species. A second station is situated in the very vicinity outside of the forest (field station, SCF). The meteorological time series are presented in hourly time resolution of air temperature, relative humidity, precipitation, photosynthetically active radiation (PAR) and wind speed. Schänis is part of the Long-term Forest Ecosystem Research Programme (LWF) established and maintained by the Swiss Federal Research Institute WSL.

climate-change

display_name: climate-change

long-term

display_name: long-term

meteo

display_name: meteo

meteorology

display_name: meteorology

par

display_name: par

precipitation

display_name: precipitation

relative-humidity

display_name: relative-humidity

swiss-forest-lab

display_name: swiss-forest-lab

temperature

display_name: temperature

wind-speed

display_name: wind-speed

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Schänis, Switzerland: Long-term forest meteorological data from the Long-term Forest Ecosystem Research Programme (LWF), from 1998 onwards


weissfluhjoch-dataset-for-esm-snowmip

maintainer: Nander Wever

title_for_slug: weissfluhjoch-dataset-for-esm-snowmip

en: esm-snowmip weissfluhjoch snow-models snow snow-depth

en: Conversion script

en:
Use this script to convert WFJ_optimaldataset_v6.smet to wfj.smet, the file that is used for the ESM-SnowMIP project. It also requires the file: WFJ_AirPressure_Data.zip

Use: bash create_wfj_dataset.sh > input/wfj.smet

mimetype: text/x-sh

mimetype: application/zip

en: ini file

en: This ini file is required by data-converter from MeteoIO version 1887 (http://models.slf.ch/p/meteoio/)

en: Dataset Weissfluhjoch for ESM-SnowMIP

en: This Weissfluhjoch dataset is a processed version of the Weissfluhjoch dataset version 6 from https://doi.org/10.16904/6. This dataset was specially created for the ESM-SnowMIP project. Here it is documented how this dataset has been created.

esm-snowmip

display_name: esm-snowmip

snow

display_name: snow

snow-depth

display_name: snow-depth

snow-models

display_name: snow-models

weissfluhjoch

display_name: weissfluhjoch

en: Weissfluhjoch dataset for ESM-SnowMIP


maintainer: Yael Frischholz

en: winter-electricity bifaciality alps photovoltaic snow

en:
Title: Monitoring data set at A2 (utility-scale power-plant Muttsee), months 10.2022-09.2023
Provider: AXPO - IWB Industrielle Werke Basel
Last edition: 17.01.2024
Editor: Y.Frischholz, Laboratory of Cryospheric Sciences, EPFL
File name structure:
The power-plant is made of 23 string boxes (GAK) and inverters (WR) named after their given number. One file per device is provided in the data/ subfolder, following the same naming convention (e.g. for the string box number 1, the file name is: “A2_GAK01.csv” and for the corresponding inverter, the file name is “A2_WR01.csv”). Refer to the publication for further details on the setup of the power plant.
File format:
All files are provided in the CSV format.
Column headings:
	String boxes and inverters (GAK & WR):
	⁃	device_name (string): name of the device (same as file name)
	⁃	timestamp (datetime64): time stamp in format “YYYY-MM-DD HH:mm:ss”, time-zone: UTC
	String boxes (GAK):
	⁃	I_ (double): input current from the substring number (W)
	⁃	I_SUM (double): output current of string box (A)
	⁃	U_DC (double): output voltage of string box (V)
	⁃	P_DC_ (double): input DC power from the substring number (W)
	⁃	P_DC (double): output DC power of string box (W)
	⁃	$S$_T#_$T$ (double): temperature from the sensor connected to the string box (empty if not existing), placed on the “front” or “back” side (S) of table T. Two types of temperature measurements (#) are available: 1=standard cell temperature (°C) , 2=module temperature on the rear side (°C) .
	⁃	$S$_SRAD_T (double): poa irradiation (W/m**2) from the sensor connected to the string box (empty if not existing), placed on the “front” or “back” side (S) of table T.
		Inverters (WR):
	⁃	I_DC (double): input DC current(A)
	⁃	U_DC(double): input DC voltage(V)
	⁃	P_DC (double): input DC power (W)
	⁃	P_AC (double): output AC power (W)
Preprocessing:
	1. Outliers:
	⁃	Quantiles Q1 and Q99 are computed for each variable
	⁃	Values below Q1 and above Q99 are considered outliers
	⁃	Outliers are replaced by NaNs.

	2. Missing data:
	⁃	Data holes of less or equal to 3 hours are interpolated linearly for all variables
	⁃	Data holes of more than 3 hours are replaced using the monthly nan-mean of the considered hour if more than 50% of the qualifying data points are available. For instance, if the data point 2022-12-12 12:12:00, is missing for a given variable and is part of a data hole larger than 3 hours, then it is replaced by the mean of all data points with hour = 12 of the month of December 2022, if 50% of all the qualifying data points are not NaN. In case more than 50% of the qualifying points are missing, the data point remains as missing (NaN).
	3. Wiring losses:
	⁃	To be consistent with A1, wiring losses are corrected at A2. The wiring loss between the string boxes and the inverters is removed by multiplying the value of input P_DC at the inverter level (P_DC,inv) by the mean ratio P_DC,inv / P_DC,arr.
	⁃	The computed mean wiring loss is 2.3\%. It is computed from 2023-02-01 to 2023-09-30, after the long data hole in the data sets of the string boxes.

Mean uptime:
	Raw:
	⁃	WR: 98.2%
	⁃	GAK*: 38.5%
	Processed:
	⁃	WR: 99.6%
	⁃	GAK*: 56.4%

	*The uptime at the string box level (GAK) is low because PMUs at this level shut down during steady and low signal leading to unavailable data at night. In addition, the 23 days downtime of 	January 2023 could not be interpolated nor replaced.

en:
Title: Monitoring data set at A1 (test-site of Totalp), years 2018-2022
Provider: ZHAW - EKZ
Edition: Y.Frischholz, Laboratory of Cryospheric Sciences, EPFL
Last edition: 17.01.2024
File name structure:
The test site contains 6 segments named from A to F. The six files provided in the data/ subfolder follow the same naming convention (e.g. for segment A, the file name is: “A1_A.csv”). Refer to the publication for further details on the setups of the segments.
File format:
All files are provided in the CSV format.
Column headings:
	•	timestamp (datetime64): time stamp in format “YYYY-MM-DD HH:mm:ss”, time-zone: UTC
	•	poa_front (double): front plane-of-array irradiation (W/m**2)
	•	poa_back (double): rear plane-of-array irradiation (W/m**2)
	•	mod_temp (double): module’s temperature (°C)
	•	P_AC (double): output AC power (W)
Preprocessing:
	Outliers:
	⁃	Quantiles Q1 and Q99 are computed for each variable
	⁃	Values below Q1 and above Q99 are considered outliers
	⁃	Outliers are replaced by NaNs.
	Missing data:
	⁃	Data holes of less than 3 hours are interpolated linearly for all variables
	⁃	Data holes of more than 3 hours are replaced using the monthly nan-mean of the considered hour if more than 50% of the qualifying data points are available. For instance, if the data point 2022-12-12 12:12:00, is missing for a given variable and is part of a data hole larger than 3 hours, then it is replaced by the mean of all data points with hour = 12 of the month of December 2022, if 50% of all the qualifying data points are not NaN. In case more than 50% of the qualifying points are missing, the data point remains as missing (NaN).
	Wiring losses :
	⁃	As described in [1] , the test-site setup caused abnormally large wiring losses, mainly due to the distance to optimisers and to the low installed power per DC-wire.
	⁃	The wiring losses comprised between 10% and 15%, are averaged hourly and added to the measured DC power.

	Misc.:
	⁃	P_AC is computed for each segment based on the measured DC power and the average inverter’s efficiency (96.1%).
	⁃	As described in [1], the peak power of the installed module, used to compute the final yield is slightly different from the values announced by the manufacturer.
Mean uptime:
	Raw:
	⁃	95.2%
	Processed:
	⁃	100%
References:
[1] 	D. Anderegg, S. Strebel, and J. Rohrer, “Alpine Photovoltaik Versuchsanlage Davos Totalp : Erkenntnisse aus 5 Jahren Betrieb,” de, Sep. 	2023, Accepted: 2023-09-29T09:13:16Z Publisher: ZHAW Zürcher Hochschule für Angewandte Wissenschaften.DOI: 10.21256/	zhaw-2524. [Online]. Available: https://digitalcollection.zhaw.ch/handle/11475/28797 (visited on 12/15/2023).

en:
On this repository you can find the monitoring data of the 3 PV power-plants analysed in the article _"Confirmation of the power gain for solar photovoltaic systems in alpine areas"_ (doi: 10.3389/fenrg.2024.1372680) . Each folder contains the following two elements:
1. **README.txt** : describes the content of the folder. Especially it describes the plant's monitoring system's architecture and relates it to the various files included in the data sub-folder. It also provides a detailed description of all processing steps leading to the data sets as available in the data sub-folder and used in the pre-cited article.
3. **data/** : sub-folder containing the file(s) used in the referenced article.

alps

display_name: alps

bifaciality

display_name: bifaciality

photovoltaic

display_name: photovoltaic

winter-electricity

display_name: winter-electricity

en: Monitoring data sets of alpine photovoltaic power-plants


en: vert01 magdalena teleo metabarcoding fish colombia edna

en: Data access

en: Please cyberduck to download for the moment

en:
Monitoring of vertebrates of the lower Magdalena river through eDNA metabarcoding

The Magdalena River basin harbors a large biodiversity of vertebrates, with numerous endemic species, many of which are threatened. Here, we used environmental DNA (eDNA) metabarcoding, with two primer sets targeting different regions of the mitochondrial DNA 12S ribosomal RNA gene, to detect vertebrate diversity in the Magdalena River. We detected a total of 159 vertebrate taxa, not only aquatic but also terrestrial, arboreal, and aerial. The diversity of these vertebrates increases in relation to the proximity to the river mouth with a change in the composition of the assemblage of aquatic vertebrates detected. We conclude that eDNA metabarcoding allows characterizing vertebrate assemblages in large rivers, assessing conservation status, and elucidating biodiversity patterns with minimal ecosystem disturbance. Samples were taken at the sides of the river or in the center using a boat. At each station, we performed two filtration replicates using a peristaltic pump to conduct environmental DNA (eDNA) sampling. Each filtration targeted a maximum duration of 1 hours, during which a maximum of 30 liters of water were filtered through each capsule. After filtration, the water inside the capsules was removed, and the capsules were filled with 50 ml of conservation buffer for preservation at room temperature. We followed strict contamination control protocols throughout both the fieldwork and laboratory processes, adhering to the guidelines of Valentini et al. (2016). To prevent contamination, each sample was processed using disposable gloves and single-use filtration equipment. The MiSeq Reagent Kit v3 (2x75 bp) (Illumina, San Diego, CA, USA) was used for paired-end sequencing at a theoretical sequencing depth of 200,000 reads per sample.

Data content:
	* rawdata/: contains the raw reads for each individual sample. One archive contains the paired-end reads specified by the _R1 or _R2 suffix as well as individually tagged PCR replicates (if available) together with an archive containing all extraction and PCR blank samples of the library. Reads have been demultiplexed using cutadapt but not trimmed, individual demultiplexing tags and primers remain present in the sequences.
	* taxadata/: contains the table with all detected taxonomy for each sample after bioinformatic processing (see Polanco et al. 2020 for details; https://doi.org/10.1002/edn3.140) and associated field metadata.
	* metadata/: contains two metadata files, one related to the data collected in the field for each filter, and the second related to the sequencing process in the lab (including the tag sequence, library name, and marker information for each sample)

colombia

display_name: colombia

edna

display_name: edna

fish

display_name: fish

magdalena

display_name: magdalena

metabarcoding

display_name: metabarcoding

teleo

display_name: teleo

educ

en: Education, culture and sport

en: Environmental DNA Freshwater Colombia Magdalena 2022


en: snowmicropen microstructure snow-density-profile snow-density antarctica

en: Documentation SnowMicroPen measurements

en: This *.zip archive contains all available documentation of the SnowMicroPen measurements, including the mapping of the SMP measurements in the terrestrial laser scan field at PEA (see documentation for 20161220) and at the Hammarryggen Ice Rise (see documentation for 20190104 and 20190111).

en: Python code exported from the Jupyter notebook for processing the SnowMicroPen files

en: SnowMicroPen pts files and processed txt files

en: Zip archive containing the acquired *.pts files (binary files recorded by the SnowMicroPen), and the converted *.txt files using the SMP.ipynb jupyter notebook (see the python code in the other resources in this dataset)

en: Manual snow pits and other snow density measurements

en: List of SnowMicroPen measurements

en: List of all SnowMicroPen measurements, including date and location, and processing status. This list has been generated by the python code (see other resources in this dataset).

en: Jupyter notebook for processing the SnowMicroPen files.

en: SnowMicroPen (SMP) measurements and manual snowpits from Dronning Maud Land, East Antarctica. Measurements were taken in the vicinity of the Belgium Princess Elisabeth Station (PEA), in a transect towards the coast, and on the Lokeryggen and Hammarryggen Ice Rises near the coast. Measurements were taken during 3 individual campaigns in the 2016-2017, 2018-2019 and 2019-2020 field seasons.

antarctica

display_name: antarctica

microstructure

display_name: microstructure

snow-density

display_name: snow-density

snow-density-profile

display_name: snow-density-profile

snowmicropen

display_name: snowmicropen

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: SnowMicroPen measurements and manual snowpits from Dronning Maud Land, East Antarctica


maintainer: Lorenz Walthert

en: water-potential water-use-strategy root-distribution stomatal-stringency anisohydric

en: The data file contains the data shown in the Figures 2-7 in Walthert et al. (2024).

en:
This dataset represents the data shown in the Figures 2 - 7 of Walthert et al. (2024): Coordination between degree of isohydricity and depth of root water uptake in temperate tree species. Science of the Total Environment (https://doi.org/10.1016/j.scitotenv.2024.174346). A detailed methodical description of the data can be found in the Methods section of the paper.

Abstract
In an increasingly dry environment, it is crucial to understand how tree species use soil water and cope with drought. However, there is still a knowledge gap regarding the relationships between species-specific stomatal behaviour, spatial root distribution, and root water uptake (RWU) dynamics.
Our study aimed to investigate above- and below-ground aspects of water use during soil drying periods in four temperate tree species that differ in stomatal behaviour: two isohydric tracheid-bearing conifers, Scots pine and Norway spruce, and two more anisohydric deciduous species, the diffuse-porous European beech, and the ring-porous Downy oak. From 2015 to 2020, soil-tree-atmosphere-continuum parameters were measured for each species in monospecific forests where trees had no access to groundwater. The hourly time series included data on air temperature, vapour pressure deficit, soil water potential, soil hydraulic conductivity, and RWU to a depth of 2 m. Analysis of drought responses included data on stem radius, leaf water potential, estimated osmotically active compounds, and drought damage.
Our study reveals an inherent coordination between stomatal regulation, fine root distribution and water uptake. Compared to conifers, the more anisohydric water use of oak and beech was associated with less strict stomatal closure, greater investment in deep roots, four times higher maximum RWU, a shift of RWU to deeper soil layers as the topsoil dried, and a more pronounced soil drying below 1 m depth. Soil hydraulic conductivity started to limit RWU when values fell below 10-3 to 10-5 cm/d, depending on the soil. As drought progressed, oak and beech may also have benefited from their leaf osmoregulatory capacity, but at the cost of xylem embolism with around 50% loss of hydraulic conductivity when soil water potential dropped below -1.25 MPa. Consideration of species-specific water use is crucial for forest management and vegetation modelling to improve forest resilience to drought.

anisohydric

display_name: anisohydric

root-distribution

display_name: root-distribution

stomatal-stringency

display_name: stomatal-stringency

water-potential

display_name: water-potential

water-use-strategy

display_name: water-use-strategy

en: Water-use strategies of temperate tree species


maintainer: Roksolana Petrovska

en: dominance shade-tolerance lar acer regeneration mortality-rate fagus

en: The R-script of survival analysis for accelerated failure time model

en: Mortality of regeneration

en: Acer platanoides, Acer pseudoplatanus and Fagus sylvatica living and dead juveniles (0-500 cm in height) grown in the deep shade of a prime beech-dominated forest.

en:
 One individual per species, vitality class (low and high) and height class (eight classes: 0–10, 11–20, 21–35, 36–60, 61–90, 91–130, 131–200 and 201–500 cm) was randomly selected and harvested in each of the six plots. This resulted in a sample of 82, 80 and 89 living individuals of A. platanoides, A. pseudoplatanus and F. sylvatica, respectively.

 Additionally stems of dead Acer spp. and F. sylvatica trees that had died within the last three years (2015–2018) were randomly harvested, matching the height classes of the harvested living trees wherever possible. In total, 179 dead young trees (60 A. platanoides, 72 A. pseudoplatanus and 47 F. sylvatica) were collected.

 Variables:
* species_code: a_pla - Acer platanoides, a_pse - Acer pseudoplatanus, f_syl - Fagus sylvatica
* species: as above
* dummy: 0 - living individual, 1 - dead individual
* LAR_cm2_g: leaf area ratio or ratio of leaf area to total plant biomass, [cm2/g]
* tree_age: in years
* avg_ring_micron: average width of the last 5 rings in tree life excluding the last ring
* dry_mass_g: aboveground and belowground biomass
* DLI: direct light index (measured only under living individuals)
* BLI: diffuse light index (measured only under living individuals)
* GLI: global light index

acer

display_name: acer

dominance

display_name: dominance

fagus

display_name: fagus

lar

display_name: lar

mortality-rate

display_name: mortality-rate

regeneration

display_name: regeneration

shade-tolerance

display_name: shade-tolerance

educ

en: Education, culture and sport

en: Mortality of regeneration: Acer spp. and Fagus sylvatica


maintainer: Felix Kienast

en: ecosystem-services marxan optimization photovoltaic wind-power spatial-planning energy social-acceptance landscape

en:
This is the compressed Shapefile (ESRI) from the MARXAN optimization with 2216 rows (objects) and 18 columns (variables) with sf (simple feature) and data frame classes.
Column description:
X01 = Planning_units (PUs)
X02 = incl.OS. number of times pu was selected in MARXAN when optimized for ecological costs
X03 = incl.OS. number of times pu was selected in MARXAN when optimized for social costs
X04 = incl.OS. ecological costs (ECUess) of pu when realizing the total energy (normalized)
X05 = incl.OS. social costs (ECUsoc) of pu when realizing the total energy (normalized)
X06 = incl.OS. total energy (MWh/a)
X07 = incl.OS. energy from roof-mounted PV infrastructure (MWh/a)
X08 = incl.OS. energy from wind turbines (MWh/a)
X09 = incl.OS. energy from ground-mounted PV infrastructure (MWh/a)

X10 = excl.OS. number of times pu was selected in MARXAN when optimized for ecological costs
X11 = excl.OS. number of times pu was selected in MARXAN when optimized for social costs
X12 = excl.OS. ecological costs (ECUess) of pu when realizing the total energy (normalized)
X13 = excl.OS. social costs (ECUsoc) of pu when realizing the total energy (normalized)
X14 = excl.OS. total energy (MWh/a)
X15 = excl.OS. energy from roof-mounted PV infrastructure (MWh/a)
X16 = excl.OS. energy from wind turbines (MWh/a)
X17 = excl.OS. energy from ground-mounted PV infrastructure (MWh/a)
geometry = Simple feature XY geometry (SFC_POINT) each representing the center of a 4x4km planning unit (PU) in EPSG 21781 (CRS CH1903 / LV03).

en:
This study examines the siting scenarios for renewable energy infrastructure (REI) in Switzerland, incorporating the external costs of ecosystem services and, innovatively, social preferences. This approach challenges the prevalent techno-economic siting paradigm, which often overlooks these externalities. To minimize the external costs of the scenarios while maximizing energy yield, Marxan, an optimization software, was employed.
MARXAN was run for 2 versions: a) without ground-mounted open space PV infrastructure (excl. OS) and b) with ground-mounted open space PV infrastructure (incl. OS). In each version optimization was done using ecological costs (ECUess) or social costs (ECUsoc) in a regular grid of 4x4km (planning unit).

File:
PU_data.shp: compressed Shapefile (ESRI) from the MARXAN optimization with 2216 rows (objects) and 18 columns (variables) with sf (simple feature) and data frame classes.

Headers are described below:
X01 = Planning_units (PUs)

X02 = incl.OS. number of times pu was selected in MARXAN when optimized for ecological costs
X03 = incl.OS. number of times pu was selected in MARXAN when optimized for social costs
X04 = incl.OS. ecological costs (ECUess) of pu when realizing the total energy (normalized)
X05 = incl.OS. social costs (ECUsoc) of pu when realizing the total energy (normalized)
X06 = incl.OS. total energy (MWh/a)
X07 = incl.OS. energy from roof-mounted PV infrastructure (MWh/a)
X08 = incl.OS. energy from wind turbines (MWh/a)
X09 = incl.OS. energy from ground-mounted PV infrastructure (MWh/a)

X10 = excl.OS. number of times pu was selected in MARXAN when optimized for ecological costs
X11 = excl.OS. number of times pu was selected in MARXAN when optimized for social costs
X12 = excl.OS. ecological costs (ECUess) of pu when realizing the total energy (normalized)
X13 = excl.OS. social costs (ECUsoc) of pu when realizing the total energy (normalized)
X14 = excl.OS. total energy (MWh/a)
X15 = excl.OS. energy from roof-mounted PV infrastructure (MWh/a)
X16 = excl.OS. energy from wind turbines (MWh/a)
X17 = excl.OS. energy from ground-mounted PV infrastructure (MWh/a)

geometry = Simple feature XY geometry (SFC_POINT) each representing the center of a 4x4km planning unit (PU) in EPSG 21781 (CRS CH1903 / LV03).

For MARXAN optimizations (for meaning of standard files in MARXAN see https://scholar.google.ch/scholar_url?url=https://courses.washington.edu/cfr590/software/Marxan1810/marxan_manual_1_8_2.pdf&hl=de&sa=X&ei=NAWHZI6JJ8PFmAGMo47oDQ&scisig=AGlGAw-DBrsV4kUzkR6GkN1jtG66&oi=scholarr), pu_data.shp was used to generate MARXAN files input.dat, pu.dat, puvfeat.dat, spec.dat.
Coordinate Reference System: CH1903 / LV03. EPSG: 21781.

ecosystem-services

display_name: ecosystem-services

energy

display_name: energy

landscape

display_name: landscape

marxan

display_name: marxan

optimization

display_name: optimization

photovoltaic

display_name: photovoltaic

social-acceptance

display_name: social-acceptance

spatial-planning

display_name: spatial-planning

wind-power

display_name: wind-power

en: Optimizing renewable energy siting in the Swiss landscape


en: ramms hazard climate-change avalanche-mapping new-snow avalanche

en:
To assess the possible consequences of potential changes in snow accumulation and temperature and their impact on avalanche hazard, we introduce a comprehensive multi-step framework. It includes the analysis of climate change scenarios as well as the modeling of future snow covers and the simulation of avalanches in a case study region in central Switzerland.
Using a downscaling and a quantile mapping approach, we considered the high emission RCP8.5 from the CH2018 Swiss climate change scenarios and simulated a potential snow cover of more than 100 future winters with the snow cover model SNOWPACK. Changing snow accumulation and snow cover temperature was taken into account for two future time frames. The changed parameters were used in the RAMMS::EXTENDED avalanche simulation software on large scale.

avalanche

display_name: avalanche

avalanche-mapping

display_name: avalanche-mapping

climate-change

display_name: climate-change

hazard

display_name: hazard

new-snow

display_name: new-snow

ramms

display_name: ramms

envidat

en: EnviDat: the Environmental Data Portal

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: A novel approach for bridging the gap between climate change scenarios and avalanche hazard indication mapping


en: saltation-parameterizations aerodynamic-entrainment splash snow-saltation large-eddy-simulation drifting-snow

en: Code and input files to reproduce the simulations in Melo et al. (2024), as well as the post-processing scripts used in the analysis.

en:
This dataset includes the necessary files to reproduce the results presented in Melo et al. (2024):
- code version used in the simulations (also available at the institutional [GitLab repository](https://gitlabext.wsl.ch/atmospheric-models/les-lsm) - tag 'r2024')
- input files to run the simulations
- post-processing scripts (MATLAB and FORTRAN)
- selected raw output files
- post-processed results (MATLAB data files).
 	**Note:** Direct model outputs are not provided because of their size, but they can be shared upon request. They can be reproduced by running the code. The post-processed results allow you to reproduce all figures in Melo et al. (2024).

aerodynamic-entrainment

display_name: aerodynamic-entrainment

drifting-snow

display_name: drifting-snow

large-eddy-simulation

display_name: large-eddy-simulation

saltation-parameterizations

display_name: saltation-parameterizations

snow-saltation

display_name: snow-saltation

splash

display_name: splash

en: Understanding snow saltation parameterizations - Reproducibility


mountain-permafrost-hydrology

maintainer: Jeannette Noetzli

title_for_slug: mountain-permafrost-hydrology

en: mountain-permafrost-hydrology climate-change-impacts ice-rich-permafrost permafrost-degradation mass-movements monitoring-techniques

en: Synthesis report chapter of the Hydro-CH2018 project of the Federal Office for the Environment (FOEN)

en: This report was prepared as one of the synthesis report chapters of the Hydro-CH2018 project of the Federal Office for the Environment (FOEN). In earlier reports such as the CH2014-IMPACTS report (CH-Impacts 2014), the topic of mountain permafrost hydrology was not addressed. Here, we provide a baseline of the available knowledge of mountain permafrost in the Swiss Alps for future reference. We compile an overview of the current understanding of mountain permafrost in the Swiss Alps, its distribution and characteristics, observed and projected changes, and expected impacts on slope stability, infrastructure and hydrological aspects. We also briefly describe the measurement techniques and modelling approaches applied. The chapter closes with a summary of the most important open research questions. The literature cited mainly includes studies on mountain permafrost published in scientific journals and assessments of long-term observation data. We focus on permafrost hydrology interactions wherever information is available. However, systematic studies on permafrost hydrology in mountain areas are still limited.

climate-change-impacts

display_name: climate-change-impacts

ice-rich-permafrost

display_name: ice-rich-permafrost

mass-movements

display_name: mass-movements

monitoring-techniques

display_name: monitoring-techniques

mountain-permafrost-hydrology

display_name: mountain-permafrost-hydrology

permafrost-degradation

display_name: permafrost-degradation

en: Mountain Permafrost Hydrology


en: hac2 aerosol cloud-droplets ccn hygroscopicity

en: This repository contains the datasets that were used for used for the paper:: Drivers of Droplet Formation in East Mediterranean Orographic Clouds, EGUsphere, https://doi.org/10.5194/egusphere-2024-490, 2024.

aerosol

display_name: aerosol

ccn

display_name: ccn

cloud-droplets

display_name: cloud-droplets

hygroscopicity

display_name: hygroscopicity

educ

en: Education, culture and sport

en: Dataset for the publication Drivers of Droplet Formation in East Mediterranean Orographic Clouds


en: fagus-sylvatica quercus-pubescens leaf-scorching functional-traits thermal-safety-margins hot-drought thermoregulation hydraulic-safety-margins gas-exchange

en:
Tree-level photosynthetic thermal tolerance, leaf water potentials, thermal safety margins, and hydraulic safety margins measured 3-4 times per tree during the growing season.
Variable List:
	- TreeID: Unique identifier for individual trees
 	- Species: Tree species
	- Campaign: Month of the growing season in which data was collected
	- Heating: Yes or no
	- RM: Reduced soil moisture, yes or no
	- Treatment: chamber abiotic treatment (C = control, H = heated, RM = reduced soil moisture, H_RM = heated and reduced soil moisture)
	- Waterpotential: midday leaf waterpotential (MPa)
	- WPtlp: Waterpotential at leaf turgor-loss-point (MPa) *Measured by Mas, E., Cochard, H., Deluigi, J., Didion-Gency, M., Martin-StPaul, N., Morcillo, L., Valladares, F., Vilagrosa, A., & Grossiord, C. (2024). Interactions between beech and oak seedlings can modify the effects of hotter droughts and the onset of hydraulic failure. New Phytologist, 241(3), 1021-1034. https://doi.org/https://doi.org/10.1111/nph.19358
	- HSM: Hydraulic safety margin (difference between WPtlp and Waterpotential, in MPa)
	- Tcrit: Critical thermal threshold of Photosystem II (degrees C)
	- T50: High leaf temperature at which Photosystem II function declines by 50% (degrees C)
	- Tleaf.max: Maximum leaf temperature during the week preceding thermal tolerance measurement
	- TSM.min: Minimum leaf thermal safety margin during the week preceeding thermal tolerance measurement (difference between Tcrit and Tleaf.max, in degrees C)

en:
Leaf-level gas exchange collected diurnally for each tree on 4 days of the growing season and summarized to growing-season mean.
Variable List:
	- TreeID: Unique identifier for individual trees
	- Chamber: open-top-chamber ID
	- Species: Tree species
	- Treatment: chamber abiotic treatment (C = control, H = heated, RM = reduced soil moisture, H_RM = heated and reduced soil moisture)
	- Heating: Yes or no
	- RM: Reduced soil moisture, yes or no
	- gsw.mean: Mean stomatal conductance to water vapor (mol m^-2 s^-1)
	- E.mean: Mean transpiration rate (mol m^-2 s^-2)
	- Tdiff.mean: Mean difference between leaf and air temperature on the day of Licor measurements
	- lnE.mean: Mean of the natural log of the transpiration rate
	- lnE.mean~Tdiff.mean_slope: The slope of the linear least-squares relationship between the natural log of lnE.mean and Tdiff.mean

en:
Tree-level leaf scorching occurrence and severity data summarized by date with daily leaf thermal safety margins.
Variable List:
	- TreeID: Unique identifier for individual trees
	- Date (MM/DD/YYYY)
	- Heating: Yes or no
	- RM: Reduced soil moisture, yes or no
	- Treatment: chamber abiotic treatment (C = control, H = heated, RM = reduced soil moisture, H_RM = heated and reduced soil moisture)
	- Species: Tree species
	- Tleaf: Leaf temperature (degrees C) *measured by an infrared sensor integrated into the Cavicam
	- Tcrit: Critical thermal threshold of Photosystem II (degrees C) *daily entries inherit the Tcrit measured onthe next measurement date and applied to the interval preceding it (or are forward-filled when Tcrit could not be estimated in August or September)
	- TSM: Leaf thermal safety margin (difference between Tcrit and Tleaf, in degrees C)
	- Scorch_binary: Binary indicating whether scorching occurred on that date (0 = no, 1 = yes)
	- Percent_affected: Percent of the camera window affected by scorching during a scorching event

en:
Chamber-level abiotic data recorded every 10 minutes.
Variable List:
	- Time (MM/DD/YYYY HH:MM)
	- Chamber: open-top-chamber ID
	- Treatment: chamber abiotic treatment (C = control, H = heated, RM = reduced soil moisture, H_RM = heated and reduced soil moisture)
	- Heating: Yes or no
	- RM: Reduced soil moisture, yes or no
	- Tair: Air temperature (degrees C)
	- Tair_sd: Standard deviation of air temperature
	- RH: Relative humidity
	- RH_sd: Standard deviation of relative humidity
	- VPD: Vapor pressure deficit (kPa)
	- Tsoil: Soil temperature (degrees C)
	- Soil_m: Volumetric soil water content (m^3/m^3)
	- PPFD: Photosynthetic photon flux density (micromoles m^-2 s^-1) *collected from a weather station next to the open-top-chambers (50% intensity inside chambers)
	- windspeed: (m/s) *collected from a weather station next to the open-top-chambers

en:
Tree-level leaf temperature data recorded every 10 minutes.
Variable List:
	- Timestamp (MM/DD/YYYY HH:MM)
	- TreeID: Unique identifier for individual trees
	- Chamber: open-top-chamber ID
	- Treatment: chamber abiotic treatment (C = control, H = heated, RM = reduced soil moisture, H_RM = heated and reduced soil moisture)
	- Heating: Yes or no
	- RM: Reduced soil moisture, yes or no
 	- Species: Tree species
	- Tair: Air temperature (degrees C)
	- Tleaf: Leaf temperature (degrees C)
	- Tdiff: Leaf-to-air temperature differential (degrees C)

en:
Tree-level leaf functional trait data.
Variable List:
	- TreeID: Unique identifier for individual trees
	- Chamber: open-top-chamber ID
	- Treatment: chamber abiotic treatment (C = control, H = heated, RM = reduced soil moisture, H_RM = heated and reduced soil moisture)
	- Heating: Yes or no
	- RM: Reduced soil moisture, yes or no
 	- Species: Tree species
	- Leaf_width (cm)
	- Leaf_area (cm^2)
	- Stomatal_density (count per cm^2)
	- Pore_length: Stomatal pore length (micrometers)
	- Guard_cell_width: Stomatal guard cell width (micrometers)
	- Leaf_thickness (mm)
	- Epidermal_thickness (mm)
	- Parenchyma_thickness (mm)
	- Parenchyma:Epidermis: Ratio between parenchyma and epidermal thickness
	- Reflectance: Reflectance of photosynthetically active radiation (400-700), fraction
	- Transmittance: Transmittance of photosynthetically active radiation (400-700), fraction
	- Absorptance: Absorptance of photosynthetically active radiation (400-700), fraction
	- Absorbance: Optical absorbance of photosynthetically active radiation (400-700 nm), unitless
	- g1: Medlyn-style stomatal slope calculated with Licor LI6800 data

en: README file with more information about the dataset.

en:
Plant ecophysiological and associated environmental data for two tree species (*Fagus sylvatica* and *Quercus pubescens*) grown for five years in a factorial open-top climate chamber experiment (Model Ecosystem Facility, Birmensdorf, Switzerland) to test the long-term effects of heat (+5 °C) and soil drought (irrigation reduced by 50%). n = 4 trees per species and treatment, n = 48 trees total.
 Included data sheets:
- Environmental_Data.csv: Chamber-level environmental recorded every 10 minutes
- Tleaf.csv: Leaf temperatures recorded every 10 minutes
- Gas_exchange.csv: Leaf-level gas exchange data taken diurnally on four days during the growing season
- Leaf_traits.csv: Leaf functional traits
- TSMs_HSMs.csv: Photosynthetic thermal tolerance and leaf water potential data, summarized also in terms of leaf thermal safety margins and hydraulic safety margins, collected 3-4 times during the growing season
- Scorch.csv: Leaf-level leaf scorching data, including leaf thermal safety margins and scorching occurrence and presence, summarized by date

fagus-sylvatica

display_name: fagus-sylvatica

functional-traits

display_name: functional-traits

gas-exchange

display_name: gas-exchange

hot-drought

display_name: hot-drought

hydraulic-safety-margins

display_name: hydraulic-safety-margins

leaf-scorching

display_name: leaf-scorching

quercus-pubescens

display_name: quercus-pubescens

thermal-safety-margins

display_name: thermal-safety-margins

thermoregulation

display_name: thermoregulation

en: Hydraulic stress limits thermal acclimation in trees under chronic drought


chelsacerra-daily

title_for_slug: chelsacerra-daily

en: reanalysis maximum-temperature air-temperature minimum-temperature climate europe

en: Daily Mean Near-Surface Air Temperature 2006

en: Daily Mean Near-Surface Air Temperature

en: Daily Mean Near-Surface Air Temperature 2003

en: Daily Mean Near-Surface Air Temperature 1994

en: Daily Mean Near-Surface Air Temperature 2004

en: Daily Mean Near-Surface Air Temperature 2011

en: Daily Mean Near-Surface Air Temperature 1999

en: Daily Mean Near-Surface Air Temperature 1987

en: Daily Mean Near-Surface Air Temperature 2000

en: Daily Mean Near-Surface Air Temperature 2005

en: Daily Mean Near-Surface Air Temperature 1998

en: Daily Mean Near-Surface Air Temperature 1986

en: Daily Mean Near-Surface Air Temperature 1995

en: Daily Mean Near-Surface Air Temperature 2012

en: Daily Mean Near-Surface Air Temperature 1990

en: Daily Mean Near-Surface Air Temperature 2015

en: Daily Mean Near-Surface Air Temperature 2013

en: Daily Mean Near-Surface Air Temperature 2009

en: Daily Mean Near-Surface Air Temperature 1991

en: Daily Mean Near-Surface Air Temperature 2002

en: Daily Mean Near-Surface Air Temperature 1985

en: Daily Mean Near-Surface Air Temperature 2008

en: Daily Mean Near-Surface Air Temperature 1997

en: Daily Mean Near-Surface Air Temperature 2001

en: Daily Mean Near-Surface Air Temperature 1992

en: Daily Mean Near-Surface Air Temperature 1993

en: Daily Mean Near-Surface Air Temperature 1996

en: Daily Mean Near-Surface Air Temperature 1989

en: Daily Mean Near-Surface Air Temperature 2007

en: Daily Mean Near-Surface Air Temperature 1988

en: Daily Mean Near-Surface Air Temperature 2014

en: Daily Mean Near-Surface Air Temperature 2010

en:
CHELSA is a mechanistic downscaling model that links large-scale atmospheric conditions with local topographic factors to produce very high-resolution climate data. It includes commonly used climate variables for impact modeling, such as air temperature, precipitation, humidity, solar radiation, wind speed, and derived variables.
CHELSAcerra daily is a high resolution climate dataset for air-temperatures generated with the CHELSA downscaling model using the Copernicus regional reanalysis for Europe (CERRA).
Daily summaries are provided for: Daily Mean Near-Surface Air Temperature

air-temperature

display_name: air-temperature

climate

display_name: climate

envidat

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.


maintainer: Peter Bebi

en: vegetation experiment soil-temperature carbon-dioxide stillberg climate-change

en: Metadata FACE Stillberg Experimental Design

en: Schematic illustration and tabular listing of the FACE experimental design.

en: Data FACE Stillberg

en: Folder in .zip format containing the FACE datasets.

en: Metadata FACE Stillberg Data File Description

en: List of descriptions for each of the .csv FACE data files.

en:
 Background information

High elevation ecosystems are important in research about environmental change because shifts in climate associated with anthropogenic greenhouse gas emissions are predicted to be more pronounced in these areas compared to most other regions of the world. This project involved a Free Air CO2 Enrichment (FACE) and soil warming experiment located in a natural treeline environment near Davos, Switzerland (Stillberg, 2200 m a.s.l.). Elevated atmospheric CO2 concentrations (+200 ppm) were applied from 2001 until 2009, and a soil warming treatment (+4 °C) was applied from 2007 until 2012. The combined CO2 enrichment and warming treatment reflects conditions expected to occur in this region in approximately 2050. A broad range of ecological and biogeochemical research was carried out as part of this environmental change project.

 Experimental design

The experiment consisted of 40 hexagonal 1.1 m² plots, 20 with a *Pinus mugo* ssp. *uncinata* (mountain pine, evergreen) individual in the centre and 20 with a *Larix decidua* (European larch, deciduous) individual in the centre. A dense cover of understorey vegetation surrounded the tree in each plot, including the dominant dwarf shrub species *Vaccinium myrtillus* (bilberry), *Vaccinium gaultherioides* (group *V. uliginosum agg.*, northern bilberry) and *Empetrum nigrum* ssp. *hermaphroditum* (crowberry) plus several herbaceous and non-vascular species.
At the beginning of the experimental period, the 40 plots were assigned to ten groups of four neighbouring plots (two larch and two pine trees per group) in order to facilitate the logistics of CO2 distribution and regulation. Half of these groups were randomly assigned to an elevated CO2 treatment, while the remaining groups served as controls and received no additional CO2. In spring 2007, one plot of each tree species identity was randomly selected from each of the 10 CO2 treatment groups and assigned a soil warming treatment, yielding a balanced design with a replication of five individual plots for each combination of CO2 level, warming treatment and tree species.

 Data description

Soil and air conditions have been monitored closely throughout the study period, with most measurements made during the combined CO2 x warming experiment (2007-2009). The data comprise of air temperature, soil temperature, soil moisture, sapflow, tree diameter and CO2 measurements.

carbon-dioxide

display_name: carbon-dioxide

climate-change

display_name: climate-change

experiment

display_name: experiment

soil-temperature

display_name: soil-temperature

stillberg

display_name: stillberg

vegetation

display_name: vegetation

educ

en: Education, culture and sport

envidat

en: EnviDat: the Environmental Data Portal

en: FACE: Stillberg CO2 enrichment and soil warming study


maintainer: Anita C. Risch

en: grassland herbivory native-plant weed-management non-native-plant

en: Data file native and non-native plant interactions in Australian grasslands

en:
taxa tab:	list and overview of all the recorded species

* family:                 family of the plant

* genus:                genus of the plant

* species:                plant species name

* origin:                indicates whether the plant is native to Australia or not (non-native)

* common name:	        common name of the plant species

* functional group:	        functional group of the plant species: forb, graminoid, fern, tree

* functional group detailed:	gives more detail about the type of graminoid and forb: legume, forb (non-leguminous),
                        grass, sedge, rush, fern, tree

* lifeform:                annual or perennial lifeform (species which can have both of these lifeforms where
                        considered as annuals)

plot tab:	list of species found in each plot and their cover (%)

* sampling.session:        provides information about the sampling time:
                        May2020 = data that was collected in May 2020
                        Nov2020 = data that was collected in November 2020

* farm.name:	            name of the farms where the sampling took place:
                        SF = farm of the Southern group
                        NF = farm of the Northern group
                        numbers 1-3 = randomly allocated to the Southern group of farms
                        numbers 4-6 = randomly allocated to the Northern group of farms

* site.type:	                KG: Kangaroo grass dominated site
                        ALG: ALG+KG site (Kangarooo grass and African lovegrass co-dominated site)

* plot.no:                plot number: 9-12

* scientific.name:	        scientific name of the plant species found in a certain plot

* functional group:	        indicates whether the species found is a tree, forb, graminoid or fern

* functional group detailed:	indicates whether the species found is a tree, legume, forb (non-leguminous),
                        grass, sedge, rush, fern

* lifeform:                specifies the lifeform of the species: annual or perennial lifeform
                        (species which can have both of these lifeforms where considered as annuals)

en:
This dataset contains all data, on which the following publication below is based.

Paper Citation:

_Schlierenzauer, C., Risch, A.C., Schütz, M., Firn, J. 2021. Non-native Eragrostis curvula reduces plant species diversity in pastures of South-eastern Australia even when native Themeda triandra remains co-dominant. Plants 10, 596._

Please cite this paper together with the citation for the datafile.

Study area
The study was conducted in the lowland grassy woodlands of the Bega Valley Region, which is located in the south-east corner of New South Wales, Australia. Embedded between the Pacific Ocean and the Australian Alps, the lowland grassy woodlands are mostly located on granitic substrates and reach elevations of roughly 500 m above sea level. Typically, these grassy woodlands receive less precipitation (mean annual precipitation between 700-1100 mm) compared to the more elevated areas that surround them (NSW Government - Office of Environment and Heritage 2017).
The vegetation is dominated by an open tree canopy layer consisting of Eucalyptus tereticornis Sm, Angophora floribunda Sm. (Sweet) and a range of other eucalypt species. Sometimes shrub or small trees are also present, whereas grasses and forbs form the ground-cover. In areas without intensive agricultural history, this layer is dominated by perennial, tussock grasses such as Themeda triandra Forssk, Microlaena stipoides R.Br (Weeping Grass), Eragrostis leptostachya Steud. (Paddock Lovegrass) and Echinopogon ovatus P.Beauv (Forest Hedgehog Grass). The remaining inter-tussock spaces are occupied by a diversity of growth-restricted grasses and herbaceous forbs (NSW - Department of Planing, Industries and Environment 2019; NSW Government - Office of Environment and Heritage 2017).
Clearing, pasture sowing, fertilizer application and livestock grazing resulted in a dramatic decrease in the extent of these natural woodlands, with less than five percent within conservation reserves and overall, with only about 20% of their original extent in New South Wales still existing (Tozer et al. 2010). The remaining areas outside of reserves are threatened by altered fire frequencies, habitat clearing, livestock grazing and especially by non-native plant invasion, particularly Eragrostis curvula (Schrad.) Nees. For this reason, the grassy woodlands are listed as an endangered ecological community in the NSW state legislation. Additionally, they are considered as critically endangered by the Commonwealth of Australia (Threatened Species Scientific Committee (TSSC) 2013).

Experimental design and sampling
The study was conducted on six farms and in each of them two sites were chosen, representing a paired design. One of the sites at each farm is dominated by native Themeda triandra, the other one co-dominated by non-native Eragrostis curvula and Themeda triandra. All farms are within a radius of approximately 10 km from the town Candelo. Three of the farms are located North (36°40’ to 36°42’ S and 149°38’ to 149°42’ E) and three of them are located South (36°51’ to 36°49’ S and 149°38’ to 149°42’ E) of Candelo.
Non-native herbivores (mainly cattle, sheep and rabbits) and native herbivorous marsupials (mainly kangaroos, wallabies and wombats) are present in the area of these sites. On each site, data was collected within four plots (each 1 x 1 m) in May and November 2020. All plant species found within a plot were recorded and their relative abundance was estimated.

References
NSW - Department of Planing, Industries and Environment. 2019. “Lowland Grassy Woodland in the South East Corner Bioregion - Endangered Ecological Community Listing.” https://www.environment.nsw.gov.au/topics/animals-and-plants/threatened-species/nsw-threatened-species-scientific-committee/determinations/final-determinations/2004-2007/lowland-grassy-woodland-south-east-corner-bioregion-endangered-ecological-community-l (February 18, 2021).
NSW Government - Office of Environment and Heritage. 2017. “Lowland Grassy Woodland in the South East Corner Bioregion - Profile.” https://www.environment.nsw.gov.au/threatenedSpeciesApp/profile.aspx?id=20070 (January 31, 2021).
Threatened Species Scientific Committee (TSSC). 2013. Environment Protection and Biodiversity Conservation Act 1999 (EPBC Act) Conservation Advice for Lowland Grassy Woodland in the South East Corner Bioregion. http://www.environment.gov.au/biodiversity/threatened/communities/pubs/82-conservation-advice.pdf.
Tozer, Mark et al. 2010. “Native Vegetation of Southeast NSW: A Revised Classification and Map for the Coast and Eastern Tablelands.” Cunninghamia : a journal of plant ecology for eastern Australia 11(3): 359–406.

grassland

display_name: grassland

herbivory

display_name: herbivory

native-plant

display_name: native-plant

non-native-plant

display_name: non-native-plant

weed-management

display_name: weed-management

en: Native and no-native plant interactions in Australian grasslands


maintainer: Joan Casanelles Abella

en: poznan paris tartu plants urban floral-inventories floral-resources antwerp angiospermae zurich

en: List of plant species sampled in the five cities (Antwerp, Paris, Poznan, Tartu and Zurich) during the different sampling perionds (four for Zurich, three for the other cities) with their frequency (oc1-oc16) within a 100 m radius

en: Trait values for the sampled plants

en: Floral units, mean number of flowers per floral unit and floral abundance of the different plants counted in quadrats in the study sites in Zurich during the four sampling periods

en: Data of a survey of flowering plants in 80 sites in five European cities and urban agglomerations (Antwerp, Belgium; greater Paris, France; Poznan, Poland; Tartu, Estonia; and Zurich, Switzerland) sampled between April and July 2018.

angiospermae

display_name: angiospermae

antwerp

display_name: antwerp

floral-inventories

display_name: floral-inventories

floral-resources

display_name: floral-resources

paris

display_name: paris

plants

display_name: plants

poznan

display_name: poznan

tartu

display_name: tartu

urban

display_name: urban

zurich

display_name: zurich

envidat

en: EnviDat is the WSL data portal providing unified and managed access to environmental monitoring and research data. The portal has the capability to host and publish data sets. Through the sharing of unique and high-value data sets worldwide, EnviDat fosters research and contributes to advancing environmental science.

en: Flowering Plants (Angiospermae) in Urban Green Areas in five European Cities


maintainer: Christian G. Sommer

en: snow wind-packing kinect wind-crust wind-tunnel

en: README

en: Describes the dataset in detail

mimetype: text/plain

en: Kinect data

en: Processing scripts

en: Contains the Matlab- and R-scripts used to process the Kinect data

en:
This data sets contains the Microsoft Kinect data from 15 wind tunnel experiments on wind-packing / wind crust formation. These experiments were performed in the winter 2016/17. The Kinect measures distributed snow depth.

The Kinect data is organized per experiment. Each experiment subfolder contains the processed Kinect depth images and some additional files.

Please refer to the README for more details on the data. The processing scripts are available for download as well. The scripts are mainly provided as documentation and would need to be adjusted to be used.

This dataset is the basis of the following publication:

Sommer C.G., Lehning M. & Fierz C. (2018). Wind Tunnel Experiments: Influence of Erosion and Deposition on Wind-Packing of New Snow. Front. Earth Sci. 6:4. doi: 10.3389/feart.2018.00004

kinect

display_name: kinect

snow

display_name: snow

wind-crust

display_name: wind-crust

wind-packing

display_name: wind-packing

wind-tunnel

display_name: wind-tunnel

en: Wind crust formation: Microsoft Kinect data